Papillary architecture of the Leopardus pardalis tongue

The ocelot (Leopardus pardalis) is a Felidae of wide geographical distribution and food flexibility; therefore, it is essential to understand the morphology of the species. Thus, we aimed to describe its lingual morphology in order to gain information regarding the anatomy of this carnivore's digestive system. The tongues ??were removed for ex situ macroscopic and morphometric analyses, as well as for light microscopy and scanning electron microscopy, of fragments of the different lingual regions. The tongue of L. pardalis had an elongated form that was subdivided into the apex, body and root, in which four papillary types were observed: filiform, fungiform, circumvallate and conical. It presented with a stratified, keratinized squamous epithelium, followed by loose and dense connective tissues, as well as a skeletal striated musculature that comprised most of the organ. In addition, in scanning electron microscopy the filiform papillae showed a complex with multiple layers of keratin with triangular shape projected caudally in oral cavity. The fungiform papillae were distributed among the filiform and showed a rounded shape with some gustatory pores, and are keratinized but in a lower intensity if compared with filiform. The vallate papillae, located in lingual root, showed an oval format, had a deep groove surrounded the papillae and some gustatory pores. The conical papillae are located in lingual root and are similar to the filiform. The tongue of L. pardalis resembles other carnivorous species, mainly among felids. However, it differed in relation to the quantity of vallate papillae and the absence of foliate papillae.     

Genomic regions and enrichment analyses associated with carcass composition indicator traits in Nellore cattle

The aim of this study was to estimate genetic parameters and identify genomic regions associated with carcass traits obtained by ultrasound and visual scores in Nellore cattle. Data from ~66,000 animals from the National Association of Breeders and Researchers (ANCP) were used. The variance components for backfat thickness, rump fat thickness and Longissimus muscle area (LMA) were estimated considering a linear model whereas a threshold model for body structure (BS), finishing precocity (FP) and musculature (MS) traits. The SNP solutions were estimated using the ssGBLUP approach by considering windows of 10 consecutive SNPs. Regions that accounted for more than 1.0% of the additive genetic variance were used. Genes identified within the significant windows, such as FOXA3, AP2S1, FKRP, NPASI and ATP6V1G1, were found to be related with MS, while OMA1 and FFGY with BS and FP traits. The PLTP, TNNC2 and GPAT2 genes were found in the regions associated with LMA, as well as TKT, FNDC5 and CHRND can strongly be related with fat deposition. Gene enrichment analysis revealed processes that might be directly influenced the organism growth and development. These results should help to better understand the genetic and physiological mechanisms regulating growth and body composition, muscle tissue development and subcutaneous fat expression, and this information might be useful for future genomic studies in Nellore cattle.     

Oogenesis is accompanied by cyclic morphological changes in hepatocytes of Neotropical freshwater fish Piabina argentea

We determined for the first time the reproductive biology of Piabina argentea through macroscopic and microscopic analysis of ovaries and evaluated the morphological changes in hepatocytes. Two hundred and 46 specimens were collected, 204 females and 42 males, between March 2014 and February 2015. Biometrics data were obtained. From females, gonad and liver samples were conducted to histological, histochemical and immunohistochemical techniques. Mature ovaries were used to determine absolute and relative fecundity. Total length and body weight values indicated that females were larger than males. The estimated weight–length ratio showed negative allometric growth. The absolute fecundity average was 171.83 ± 59.89 oocytes per ovary. In addition, females spawning capable and regressing stages were found throughout the sampling period and the presence of all oocyte types in regressing stage ovaries indicated asynchronous oocyte development and multiple spawning. From regenerating to spawning capable stage the oocytes accumulated yolk in cytoplasm became bigger. While in the liver hepatocytes with a larger cell area during regenerating stage and proliferative activity in the spawning capable stage were observed. Thus, our results indicate that P. argentea had an opportunistic reproductive strategy and cyclic morphological changes of hepatocytes occurred during the oogenesis.     

A size‐age model based on bootstrapping and Bayesian approaches to assess population dynamics of Anguilla anguilla L. in semi‐closed lagoons

A size‐age modelling technique is presented for assessing the vital rates, stock and recruitment of eel populations in semi‐closed lagoons with fully monitored migration of silver eels. Data for yellow and silver European eels (Anguilla anguilla L.) were obtained in 2011 from the Comacchio lagoon (Italy). The analysis was performed in three steps: (i) correction of yellow eel data, which are affected by the fyke nets selectivity during samplings, (ii) estimation of survival curve, stock, recruitment and metamorphosis rates of the population (calibration using data from 2011) and (iii) validation of the model using the observed amount of silver eel migrating population of the next year. A bootstrap procedure was used to assess the level of uncertainty for each parameter using the 95% intervals of the highest posterior density distribution HPDD (Bayesian approach). The measured abundance of silver eels was 0.56 ind·ha^?1, while the yellow eel abundance and recruitment were estimated by the model for 2011 at 8.77 ind·ha^?1 and 5.99 ind. ha^?1 respectively. The model performance during validation was satisfactory as the observed total mass of migrating population of 2012 (3777 kg) was inside the 95% HPDD intervals (3197–3839 kg) of model's predictions. The estimated stocks and recruitment were at least ten times lower from the respective estimations of previous studies of 1989 highlighting the crucial conditions of the population. The proposed modelling approach can provide significant information about eel population conditions, facilitating the evaluation of a range of management options in the context of eel conservation plans.     

Development of a Model to Simulate Nitrogen Dynamics in an Integrated Shrimp–Macroalgae Culture System with Zero Water Exchange

The effluents of traditional shrimp monoculture cause pollution and promote eutrophication and hypernutrification of the receiving coastal ecosystems. Integrated aquaculture and a recirculating aquaculture system (RAS) have been proposed as an alternative to address these problems. In this study, we developed a dynamic model to simulate the concentration of total ammonia nitrogen (TAN), nitrite, and nitrate in an integrated culture of whiteleg shrimp, Litopenaeus vannamei, and seaweed, Gracilaria vermiculophylla, in a recirculating and zero water exchange system, and the effect of nitrifying and heterotrophic bacteria was also included. The experiments demonstrated that a dynamic model can explain the concentrations of dissolved inorganic nitrogen and variations in these concentrations over time in the integrated culture. The results also suggest that nitrifying and heterotrophic bacteria play an important role in the transformation of dissolved nitrogenous compounds; therefore, these bacteria should be considered within the dynamics of nitrogen in integrated systems with low water exchange.     

Autoantigenic nuclear proteins of a clinically atypical renal vasculitis

Background

Systemic vasculitides constitute a heterogeneous group of diseases of autoimmunological origin characterized by inflammation of blood vessels and antibodies that react against autoantigens in a process that ultimately affects blood vessel walls. An important number of these patients present kidney disease. An endeavour of this area of research is the identification of autoantigens involved in these diseases. Accordingly, we used serum from a patient suffering from a microscopic polyangiitis, P-ANCA positive, manifesting a clinically atypical renal necrotizing glomerulonephritis and interstitial nephropathy for the identification of autoantigens; we also determined the prevalence of corresponding autoantibodies in other vasculitides, diabetic microangiopathy and in general population.

Methods

The patient's serum was used as a probe for the immunoscreening method SEREX to screen a human brain cDNA expression library.

Results

Four positive clones were isolated and sequenced. Clones Jos002 code for protein HDAC5, Jos014 for TFC4, Jos107 for RTF1, and Jos313 for POLDIP3 polymerase. The four proteins are of nuclear localization. None of them had been reported as autoantigen. Recombinant proteins were synthesised and checked as antigens by western blot with different sera from controls and patients affected with other vasculitides and diabetic microangiopathy as well. Only the serum from the patient origin of this study recognized all recombinant proteins.

Conclusion

We identify four nuclear proteins, HDAC5, TFC4, RTF1 and POLDIP3 polymerase as new autoantigens that could be used as markers in the diagnosis of subfamilies in immune diseases, although we cannot determine the role of these proteins in the aetiopathogenic process.

     

Plant diversity enhances the reliability of belowground processes

Theory predicts that the probability that an ecosystem will provide a consistent level of functioning over a given unit of time, i.e. the reliability of ecosystem processes, should increase with species richness. There is growing evidence that plant diversity increases the temporal stability of productivity, but only a few studies have investigated its impact on the reliability of ecosystem processes, and information on whether this propagates to the belowground system is virtually lacking. Using a microcosm experiment with plant communities varying in species and functional group diversity and two decomposer groups (earthworms and Collembola) we investigated the effects of plant diversity on the reliability of the belowground system and vice versa, the effect of decomposers on the reliability of plant productivity. Generally, plant diversity increased the reliability of above- and belowground processes by significantly increasing the reliability of eight out of eleven measured ecosystem parameters (six out of nine belowground responses). Plant functional group diversity had a stronger stabilising effect than species richness on above- and belowground processes including plant shoot and total biomass, microbial basal respiration and Collembola densities. By contrast, in the presence of both decomposer groups the reliability of decomposer populations was reduced. The results indicate that plant diversity effects propagate into the belowground system and increase the reliability of belowground processes via more consistent plant derived belowground inputs.