Presence and impact of the exercise-induced collapse associated DNM1 mutation in Labrador retrievers and other breeds

The impact of the mutation causing dynamin 1 (DNM1)-associated exercise-induced collapse (d-EIC) was determined in a retrospective genetic survey. The frequency of DNM1 mutant allele carriers in Labrador retrievers from conformation show, field trial/hunt test, pet or service lines ranged from 17.9% to 38.0% and the frequency of homozygous mutant (EE genotype) individuals ranged from 1.8% to 13.6%; 83.6% of these EE Labradors were reported to have collapsed by 4 years of age. DNM1 mutation carriers and EE dogs with a collapse phenotype were also detected in Chesapeake Bay retrievers, Curly-coated retrievers, Boykin spaniels, Pembroke Welsh corgis and mixed breed dogs thought to be Labrador retriever crosses. The DNM1 mutation was not identified in Golden, Flat-coated, or Nova Scotia duck tolling retrievers, or 15 other non-retrieving breeds. Veterinarians and breeders should be aware that the DNM1 EE genotype is not completely penetrant and that d-EIC is a widespread health concern in several very popular breeds, as well as breeds whose genetic similarity to retrievers is not obvious.     

High Performance Thin Layer Chromatography (HPTLC) profile of an insecticidal compound of <Emphasis Type="Italic">Trochus radiatus</Emphasis> and assessment of mucus-associated bacterial extracts

The current study is based on the screening of novel insecticides from new sources that have not being exploited hitherto. The major objectives of this research work were to extract marine molluscs, Lambis lambis, Trochus radiatus and Chicoreus ramosus, from Tuticorin coastal waters using different solvents to test their insecticidal properties and partially purify the active components. The ethyl acetate extracts of L. lambis and T. radiatus showed 100% mortality of Sitophilus oryzae, at a concentration of 200 μg ml⁻¹. The LC₅₀ values for ethyl acetate extracts of L. lambis, T. radiatus and C. ramosus were found to be 67.08, 348.86 and 571.42 μg ml⁻¹, respectively. With regard to bacterial metabolites, at a concentration of 200 μg ml⁻¹ the ethyl acetate extract of A3 was able to elicit an activity of 40% and that of strain A1 – 20%. The LC₅₀ values of the bacterial metabolites were also investigated. Upon chromatographic separation of active ethyl acetate extracts of T. radiatus, the 100% methanol column-purified fraction was found to have an activity of 30% at a concentration of 10 μg against S. oryzae. The purity of the partially pure active compound was observed to be 72.78% on analysis with high pressure thin layer chromatography.     

Phytoplasmas infecting sour cherry and lilac represent two distinct lineages having close evolutionary affinities with clover phyllody phytoplasma

Phytoplasmas infecting sour cherry and lilac in Lithuania were found to represent two lineages related to clover phyllody phytoplasma (CPh), a subgroup 16SrI-(R/S)C (formerly 16SrI-C) strain exhibiting rRNA interoperon sequence heterogeneity. 16S rDNAs amplified from the cherry bunchy leaf (ChBL) and lilac little leaf (LcLL) phytoplasmas were identical or nearly identical to those of operon rrnA and operon rrnB, respectively, of CPh. There was no evidence of 16S rRNA interoperon sequence heterogeneity in either LcLL or ChBL phytoplasma. Based on collective RFLP patterns of 16S rDNA, ChBL was classified in subgroup 16SrI-R, and LcLL was classified in new subgroup 16SrI-S. The ribosomal protein (rp) gene sequences from LcLL phytoplasma were identical to those of CPh, and strain LcLL was classified in rp subgroup rpI-C. By contrast, rp gene sequences from ChBL phytoplasma differed from those of subgroup rpI-C; based on RFLP patterns of rp gene sequences, ChBL was classified in new rp subgroup rpI-O. Single nucleotide polymorphisms (SNPs), designated here by a new SNP convention, marked members of rp subgroup rpI-C, and distinguished LcLL and CPh from ChBL and other non-rpI-C phytoplasmas in group 16SrI. The results raise questions concerning phytoplasma biodiversity assessment based on rRNA genes alone and encourage the supplemental use of a single copy gene in phytoplasma identification and classification, while drawing attention to a possible role of horizontal gene transfer in the evolutionary history of these lineages.     

Identification of metallic-smelling 1-octen-3-one and 1-nonen-3-one from solutions of ferrous sulfate

Taste threshold tests of ferrous sulfate (FeSO4) solutions have been confounded by the presence of putative odorants. To detect the presence of odorants released from these solutions solid-phase microextraction (SPME) was used to collect volatiles in the headspace above FeSO4 solutions. Gas chromatography-olfactometry of samples collected over three time periods (1, 5, and 16 h) and at two temperatures (22 and 37 degrees C) revealed the presence of several metallic-smelling odorants in the headspace. Using authentic standards, two of the odorants were conclusively identified as 1-octen-3-one and 1-nonen-3-one. Trace levels of other odorants were also detected, but dilution experiments indicated that 1-nonen-3-one was at least 10 times more potent than anything else released from the solutions. 1-Octen-3-one and 1-nonen-3-one are excellent candidates for the metallic odor responses often observed in threshold testing of solutions of FeSO4.     

Characterisation of endobacterial communities in ectomycorrhizas by DNA- and RNA-based molecular methods

The diversity of endobacteria associated with ectomycorrhizas of Suillus variegatus and Tomentellopsis submollis, in two Corsican pine (Pinus nigra) stands was analysed by cultivation-dependent and cultivation-independent molecular methods. Denaturing gradient gel electrophoresis (DGGE) analysis revealed the cultivable endobacterial communities associated with S. variegatus were similar within the same stand. The most abundant cultivable bacterial species belonged to the genera Pseudomonas and Burkholderia. Cultivation-independent molecular analysis indicated that the structure of the endobacterial communities in ectomycorrhizas was consistent across all samples regardless of ECM fungal species or the pine stand from which the samples were collected. However, comparison between rDNA- and rRNA-derived DGGE gels showed that metabolically active endobacterial species were not always detected in rDNA-based profiles. Clone libraries constructed from rRNA molecules indicated that Pseudomonas and Burkholderia spp. were metabolically active bacteria. As some of the most abundant cultivable bacteria, including Bacillus/Paenibacillus spp., were not detected in cultivation-independent DGGE profiles, a combination of cultivation-dependent and -independent approaches provided a more complete assessment of the diversity of endobacteria associated with ectomycorrhizas.     

Lakeshore diversity and rarity relationships along interacting disturbance gradients: catchment area, wave action and depth

Diversity patterns of riparian plant communities have been associated with disturbance. Populations of a diversity of Atlantic Coastal Plain plants occur as disjuncts on shores of large catchment area lakes in Nova Scotia. These lakeshore communities contain rare plants with local, national and global rankings. The populations of rare plants are dynamic and their management requires an understanding of the relationship between disturbance and the survival of rare plants. This present study measured (overwinter wooden dowel removal) and observed disturbance along gradients of catchment area (CA), exposure and depth. In three separate experiments ranging from the landscape to the lake, to the single shoreline level, disturbance was linked to lake CA, exposure and depth, respectively. At all scales, disturbance was positively associated with the presence of rare species. The pattern of rare species richness over the river system was complex; at the within-lake level, the frequency of rare species per site was greatest in the intermediate CA lake while the pool of rare species was greatest in the largest CA lake. The findings focus field efforts on wide, exposed shorelines of large CA lakes where new rare plants continue to be discovered. In addition, the discrepancy between highest frequency of rare plants on intermediate CA lakes and highest species pools of rarities on large CA lakes, reinforces the need for larger protected area systems for the most naturally disturbed ecosystems which often support populations having a high turnover rate but a low site to site frequency.     

Dry bean production with various tillage and residue management systems

Limited information is available on the influence of high surface residue tillag systems and the interaction of weed control methods, cultivar maturity, and phosphorus fertilizer placement on yield parameters of dry bean (Phaseolus vulgaris L.) A 3-year field study was conducted on a Fargo clay (fine, frigid, montmorillonitic Vertic Haplaquoll) to evaluate the influence of surface or deep band placed phosphorus fertilizer, tillage systems (PLOW, SWEEP, STRIP, NOTILL) and weed control methods on harvest plant populations, seed yield and seed weight of ‘Upland’ (early maturity) and ‘C-20’ (late maturity) dry bean cultivars. Yield variables were influenced by cultivar planted and climatic conditions. Zinc deficient plants and decreased yield were observed with the ‘C-20’ cultivar when grown on PLOW system plots where phosphorus fertilizer was surface applied. Zinc deficient plants were not present when the phosphorus fertilizer was deep banded or none was applied. No zinc deficient plants were observed on NOTILL, STRIP and SWEEP system plots. Both cultivars matured 7 to 10 days earlier with NOTILL, STRIP and SWEEP systems when compared with the PLOW system. Dry bean yields were reduced 180 to 310 kg ha⁻¹ by cultivation for weed control. Little difference in yields occurred among tillage systems when climatic conditions were normal. During a cool wet season, seed yields on PLOW system plots were 150 to 400 kg ha⁻¹ higher than on plots of systems with surface residue. Seed weight, although lower on the late maturity cultivar, was not greatly changed by tillage or weed control method. Results from this study indicate that dry beans can be successfully grown with small grain surface residue systems in northern climatic areas where growing degree days exceed 1200 and growing season precipitation does not exceed 400 mm. Further, deep band placement of phosphorus fertilizer is essential in dry bean rotations to eliminate potential zinc deficiency on soils low in zinc. Switching to a high residue management system may require a special cultivator design to eliminate yield loss due to pruning of shallow roots present with high surface residue.     

Assessment of C budget for grasslands and drylands of the world

Intergovernmental Panel on Climate Change (IPCC) estimates indicate that potential changes in seasonal rainfall and temperature patterns in central North America and the African Sahel will have a greater impact on biological response (such as plant production and biogeochemical cycling) and feedback to climate than changes in the overall amount of annual rainfall. Simulation of grassland and dryland ecosystem responses to climate and CO₂ changes demonstrates the sensitivity of plant productivity and soil C storage to projected changes in precipitation, temperature and atmospheric CO₂. Using three different land cover projections, changes in C levels in the grassland and dryland regions from 1800 to 1990 were estimated to be ?13.2, ?25.5 and ?14.7 Pg, i.e., a net source of C due to land cover removal resulting from cropland conversion. Projections into the future based on a double-CO₂ climate including climate-driven shifts in biome areas by the year 2040 resulted in a net sink of +5.6, +27.4 and +26.8 Pg, respectively, based upon sustainable grassland management. The increase in C storage resulted mainly from an increase in area for the warm grassland sub-biome, together with increased soil organic matter. Preliminary modeling estimates of soil C losses due to 50 yr of regressive land management in these grassland and dryland ecoregions result in a 11 Pg loss relative to current conditions, and a potential loss of 37 Pg during a 50 yr period relative to sustainable land-use practices, an average source of 0.7 Pg C yr^?1. Estimates of the cost of a 20 yr rehabilitation program are 5 to 8×10⁹ US$ yr^?1, for a C sequestering cost of approximately 10 US$ per tC.