Assessment of genetic diversity among selected groundnut germplasm. I: RAPD analysis

Assessment of genetic diversity in a crop species is prerequisite to its improvement. The use of germplasm with distinct DNA profiles will help to generate genetically diversified breeding populations. The aims of the present experiment were to study molecular diversity among selected groundnut accessions and identify those with distinct DNA profiles for mapping and genetic enhancement. Twenty‐six accessions and eight primers of a 10‐mer were selected for random amplified polymorphic DNA assay. The genetic similarity (S_ij) ranged from 59.0% to 98.8%, with an average of 86.2%. Both multidimensional scaling and unweighted pair‐group method with arithmetic averages (UPGMA) dendrograms revealed the existence of five distinct clusters. However, this classification could not be related to known biological information about the accessions falling into different clusters. Some accessions with diverse DNA profiles (ICG 1448, 7101, and 1471, and ICGV 99006 and 99014) were identified for mapping and genetic enhancement in groundnut.     

Soil boron status: impact of lime and fertilizers in an Indian long-term field experiment on a Typic Paleustalf

In Indian agriculture, nitrogen (N) and phosphorus (P) fertilizers are predominantly used by the farmers, often ignoring secondary and micronutrients. Significance of boron (B) in nutrient management studies has been increasingly underlined under intensive cropping systems particularly in acid soils. In order to understand the distribution of soil native B in different fractions and their contribution to plant B uptake as influenced by nutrient management, soil samples collected after wheat (2009–2010) from a long-term experiment (LTE) continuing since 1972–1973 on Typic Paleustalf of Ranchi were subjected to sequential fractionation of soil B. Treatments included N alone, NP, NPK, 150% of recommended NPK, NPK + farmyard manure (FYM), NPK + lime, and an unfertilized-control. Five soil B fractions were determined along with hot CaCl₂-extractable (available) B. Averaged across the treatments, the soil had low organic carbon (C), pH and cation exchange capacity (CEC), and high free sesquioxides. Total B content was 21.7 mg kg^?1. Among different B fractions, residual B was the major contributor to total B and other fractions collectively shared 7% of total B only. Application of N alone depleted readily soluble, specifically adsorbed and organically bound B bringing the contents even below unfertilized-control. Conjoint use of lime or FYM with NPK increased significantly these fractions, whereas a decrease in oxide bound B was noticed under these treatments. Available B was positively correlated with these fractions indicating their significance in controlling B availability in the soil. The study revealed that use of lime or FYM helped modifying the distribution of soil B in different fractions by way of changing soil pH and organic C content, resulting in enrichment of plant available pool. A drastically low available B content in different treatments receiving fertilizers alone, however, suggested the necessity of B fertilization at prescribed rates for maintaining soil B fertility as also high crop yields.     

Long-term irrigation with zinc smelter effluent affects important soil properties and heavy metal content in food crops and soil in Rajasthan,India

Use of wastewater for irrigating agricultural crops is on the rise, particularly in the developing countries. The present study was undertaken to assess the long-term effect of irrigation with zinc smelter effluent on important soil properties including heavy metal status. Metal concentration in the edible parts of the crops grown on smelter effluent-irrigated soils was also measured. For this purpose, the agricultural lands which have been receiving the zinc smelter effluent irrigation for about five decades at Debari, Udaipur, India were selected. The adjacent tubewell water-irrigated fields were selected as reference. Long-term irrigation with smelter effluent resulted into significant buildup of ethylenediaminetetraacetic acid extractable Zn (57.7 fold), Cu (4.51 fold), Fe (3.35 fold), Mn (1.77 fold), Ni (1.20 fold), Pb (45.1 fold), and Cd (79.2 fold) in soils over tubewell water-irrigated fields. Total Zn, Cu, Mn, Ni, Pb, and Cd content in effluent-irrigated soils was also increased by 27.0, 1.60, 1.40, 1.30, 26.2, and 167 fold, respectively. Risk assessment indicated a very high to moderate potential ecological risk due to Cd, Pb, and Zn in soils close to the immediate vicinity of the smelter plant. Cadmium and Pb concentrations in edible parts of almost all the crops grown on effluent-irrigated soils were above the safe limit of CODEX commission. On an average, soil pH dropped by 0.31 units due to smelter effluent irrigation. Smelter effluent irrigation resulted into significant increase in soil organic carbon, electrical conductivity, and CaCO₃ content. On an average, there was decrease in available N (21.0%) and P (20.8%) content in effluent-irrigated soils over the tubewell water-irrigated ones. An increase in available K (102%) and S (26.0 fold) was recorded in effluent-irrigated soils. Long-term irrigation with zinc smelter effluent resulted into reduced microbial activities in soil as evidenced from the level of microbial biomass carbon and dehydrogenase activity. In view of the buildup of heavy metals and subsequent imbalance in essential plant nutrients in smelter effluent-irrigated soils, appropriate remediation-cum-fertilization strategy needs to be adopted for better soil health and plant nutrition.     

Developing Sustainability Indicators for Woody Biomass Harvesting in the United States

Bioenergy production has increased significantly in the last decade, and recent legislative efforts such as the discussion draft for the American Clean Energy and Security Act of 2009 and the Energy Independence and Security Act (EISA) of 2007 Energy Independence and Security Act. (2007). H. R. 6: 110th United States Congress. http://frwebgate.access.gpo.gov/cgi-bin/getdoc.cgi?dbname=110_cong_bills&docid=f:h6enr.txt.pdf (http://frwebgate.access.gpo.gov/cgi-bin/getdoc.cgi?dbname=110_cong_bills&docid=f:h6enr.txt.pdf)  [Google Scholar] are expected to encourage even more growth. The growing demand for bioenergy will necessitate production of large quantities of woody biomass and plant residues if it is to be met. However, concerns are being raised as to how increased pressures will affect the sustainability of woody biomass. In order to avoid potential pitfalls and ensure the sustainability of wood-based bioenergy systems, a set of sustainability indicators needs to be developed. Some of these indicators can be based on standards similar to those developed for sustainable forest management, energy balances, greenhouse gas emission reductions, and existing codes and guidelines for biomass harvesting. This article discusses a potential set of sustainability indicators encompassing ecological, economic, and social principles for harvesting woody biomass for bioenergy. The extent to which existing standards and certification systems reflect these indicators is elaborated upon. Methods for making these standards operational are also suggested.     

Economic and Life-Cycle Analysis of Forest Carbon Sequestration and Wood-Based Bioenergy Offsets in the Central Hardwood Forest Region of United States

This study investigates the combined impact of carbon and bioenergy markets on upland oak dominated mixed hardwood forests in the Central Hardwood Forest Region (CHFR) of the United States. A modification of the Hartman model was used for the economic analysis of carbon sequestration and using wood-based biomass for bioenergy. A life-cycle assessment was used to determine the amount of carbon sequestered due to stand growth and emitted during harvesting and decay of wood products. Two scenarios were taken, one where additionality of carbon is considered and the other where it is not. Sensitivity analysis was done with the range of carbon and bioenergy prices. The results show that net carbon payments have more impact on land expectation value (LEV) when additionality is not considered; in contrast, bioenergy payments have more impact on LEV when additionality is considered. Carbon and bioenergy prices also influenced the amount of stand level supply of forest products and carbon in both scenarios. In general, sawtimber, wood bioenergy, and carbon supply increased with an increase in carbon prices, whereas, pulpwood supply decreased. With few exceptions at higher carbon prices, bioenergy supply decreased with the increase in wood bioenergy prices, showing a backward bending supply curve in both scenarios.     

Improving androgenesis‐mediated doubled haploid production efficiency of FCV tobacco (Nicotiana tabacum L.) through in vitro colchicine application

Production of doubled haploid plants through androgenesis in flue‐cured Virginia (FCV) tobacco is a promising and convenient alternative to conventional selfing techniques for the generation of absolute homozygous lines. Here, we show a robust in vitro haploid and doubled haploid development protocol in FCV tobacco with major emphasis on improving the efficiency of chromosome doubling using in vitro colchicine treatment. We used five FCV tobacco hybrids for comparison of colchicine treatments. The anther culture response varied with developmental stages of the buds, and the highest response was observed in stage 2 buds. The effect of cold pretreatment was significant, and 4 days of pretreatment was optimum for gametic embryogenesis. Among the methods used for determining the ploidy status of plants, flow cytometry was found to be easy, fast and reliable for high‐throughput screening of haploids. Doubled haploids regeneration percentage varied from 6.77 to 11.95 in in vivo treatment, while the range of variation was 22.11% to 28.40% in in vitro colchicine treatment. We observed a pronounced increase in plant survival and the proportion of doubled haploid plants in in vitro treatment compared with the standard in vivo approach.     

Porcine reproductive and respiratory syndrome virus induces pronounced immune modulatory responses at mucosal tissues in the parental vaccine strain VR2332 infected pigs

Porcine reproductive and respiratory syndrome (PRRS) is a chronic viral disease of pigs caused by PRRS virus (PRRSV). The PRRSV VR2332 is the prototype North American parental strain commonly used in the preparation of vaccines. Goal of this study was to understand missing information on VR2332 induced immune modulation at the lungs and lymphoid tissues, the sites of PRRSV replication. Pigs were infected intranasally and samples collected at post-infection day (PID) 15, 30, and 60. Microscopically, lungs had moderate interstitial pneumonia, and the virus was detected in all the tested tissues. Peak antibody response and the cytokine IFN-γ secretion were detected at PID 30, with increased TGF-β until PID 60. Population of CD8⁺, CD4⁺, and CD4⁺CD8⁺T cells, Natural killer (NK) cells, and γδ T cells in the lungs and lymphoid tissues were significantly modulated favoring PRRSV persistence. The NK cell-mediated cytotoxicity was significantly reduced in infected pigs. In addition, increased population of immunosuppressive T-regulatory cells (Tregs) and associated cytokines were also observed in VR2332 strain infected pigs.     

Impact of Thermal Processing on Legume Allergens

Food induced allergic manifestations are reported from several parts of the world. Food proteins exert their allergenic potential by absorption through the gastrointestinal tract and can even induce life threatening anaphylaxis reactions. Among all food allergens, legume allergens play an important role in induction of allergy because legumes are a major source of protein for vegetarians. Most of the legumes are cooked either by boiling, roasting or frying before consumption, which can be considered a form of thermal treatment. Thermal processing may also include autoclaving, microwave heating, blanching, pasteurization, canning, or steaming. Thermal processing of legumes may reduce, eliminate or enhance the allergenic potential of a respective legume. In most of the cases, minimization of allergenic potential on thermal treatment has generally been reported. Thus, thermal processing can be considered an important tool by indirectly prevent allergenicity in susceptible individuals, thereby reducing treatment costs and reducing industry/office/school absence in case of working population/school going children. The present review attempts to explore various possibilities of reducing or eliminating allergenicity of leguminous food using different methods of thermal processing. Further, this review summarizes different methods of food processing, major legumes and their predominant allergenic proteins, thermal treatment and its relation with antigenicity, effect of thermal processing on legume allergens; also suggests a path that may be taken for future research to reduce the allergenicity using conventional/nonconventional methods.