A measure for the efficiency of water use and its determinants,a case study of small-scale irrigation schemes in North-West Province,South Africa

This paper analyses the efficiency with which water is used in small-scale irrigation schemes in North-West Province in South Africa and studies its determinants. In the study area, small-scale irrigation schemes play an important role in rural development, but the increasing pressure on water resources and the approaching introduction of water charges raise the concern for more efficient water use. With the data envelopment analysis (DEA) techniques used to compute farm-level technical efficiency measures and sub-vector efficiencies for water use, it was shown that under constant returns to scale (CRS) and variable returns to scale (VRS) specification, substantial technical inefficiencies, of 49% and 16%, respectively, exist among farmers. The sub-vector efficiencies for water proved to be even lower, indicating that if farmers became more efficient using the technology currently available, it would be possible to reallocate a fraction of the irrigation water to other water demands without threatening the role of small-scale irrigation. In a second step, Tobit regression techniques were used to examine the relationship between sub-vector efficiency for water and various farm or farmer characteristics. Farm size, landownership, fragmentation, the type of irrigation scheme, crop choice and the irrigation methods applied showed a significant impact on the sub-vector efficiency for water. Such information is valuable for extension services and policy makers since it can help to guide policies towards increased efficiency.     

Parameters causing variation between soil screening values and the effect of harmonization

Background, aim, and scope

This paper discusses the variation between generic soil screening values (SSV) from 17 countries for 11 volatile organic contaminants (VOC). The variation between SSV was one to four orders-of-magnitude (OOM) depending on the SSV and landuse type. What would be the variation if parameter values are harmonized between member states?

Main Features

The effect of harmonization was visualized by firstly reviewing the technical derivation procedure for SSV for 7 SSV from five countries and collecting all parameter values that are involved in the deviation. The parameters were subdivided in scientific (e.g. algorithm plus its parameter values), political (e.g. toxicological reference) or geographical (e.g. building and soil properties) elements. Secondly, new SSV were calculated with progressively harmonized sets of scientific and/or political parameter values, while the geographical parameters varied. Thirdly, the variation between SSV was compared before and after harmonization.

Results

Results show that harmonizing algorithms plus other scientific and political parameters are suited for harmonization. The variation decreases to 1 OOM, after scientific and political parameters were harmonized. Geographical parameters seem to have less impact on the differences between SSV.

Discussion

So, should we harmonize the procedures for deriving SSV between EU member states? The need for discussing harmonization is also raised by the upcoming EU Soil Framework Directive.

Conclusions

Clearly common generic SSV across all of Europe are not appropriate, since countries are allowed to include member state specific geographical and cultural elements and also political decision making. By harmonizing scientific and/or political parameters differences between SSV can be made more transparent between member states and it will encourage convergence in procedures among member states to ensure neutral conditions of competition and a coherent soil protection regime throughout Europe.

Recommendations and perspectives

To promote uniformity it is recommended to construct a toolbox for the calculation of human health risk exposure, carried by a European consensus, that includes different model algorithms for which fixed and flexible input parameters are made available. Fixed algorithm parameters are standardized and applied uniformly by all member states, e.g. physico-chemical parameters, while flexible input parameters permits member states to include region or country specific parameter values and policy decisions.     

Effects of Pro-Tex on zebrafish (Danio rerio) larvae,adult common carp (Cyprinus carpio) and adult yellowtail kingfish (Seriola lalandi)

Aquaculture practices bring several stressful events to fish. Stressors not only activate the hypothalamus–pituitary–interrenal-axis, but also evoke cellular stress responses. Up-regulation of heat shock proteins (HSPs) is among the best studied mechanisms of the cellular stress response. An extract of the prickly pear cactus (Opuntia ficus indica), Pro-Tex, a soluble variant of TEX-OE^®, may induce expression of HSPs and reduce negative effects of cellular stress. Pro-Tex therefore is used to ameliorate conditions during stressful aquaculture-related practices. We tested Pro-Tex in zebrafish (Danio rerio), common carp (Cyprinus carpio L.) and yellowtail kingfish (Seriola lalandi) exposed to aquaculture-relevant stressors (thermal stress, net confinement, transport) and assessed its effects on stress physiology. Heat shock produced a mild increase in hsp70 mRNA expression in 5-day-old zebrafish larvae. Pro-Tex increased basal hsp70 mRNA expression, but decreased heat-shock-induced expression of hsp70 mRNA. In carp, Pro-Tex increased plasma cortisol and glucose levels, while it did not affect the mild stress response (increased plasma cortisol and glucose) to net confinement. In gills, and proximal and distal intestine, stress increased hsp70 mRNA expression; in the distal intestine, an additive enhancement of hsp70 mRNA expression by Pro-Tex was seen under stress. In yellowtail kingfish, Pro-Tex reduced the negative physiological effects of transport more efficiently than when fish were sedated with AQUI-S^®. Overall, our data indicate that Pro-Tex has protective effects under high levels of stress only. As Pro-Tex has potential for use in aquaculture, its functioning and impact on health and welfare of fish should be further studied.     

Calves shedding Mycobacterium avium subspecies paratuberculosis are common on infected dairy farms

Mycobacterium avium subspecies paratuberculosis (MAP) causes Johne’s disease, a chronic progressive enteritis. It is generally assumed that calves rarely shed MAP bacteria and that calf-to-calf transmission is of minor importance. The objectives were 1) to estimate the prevalence of MAP-shedding young stock in MAP-infected dairy herds, and identify predictors for test-positive young stock; and 2) to estimate proportions of MAP-contaminated young stock group housing pens and air spaces, and furthermore, identify predictors for test-positive pens. Fecal samples were collected from 2606 young stock on 18 MAP-infected dairy farms. Environmental fecal samples were collected from all group-housing pens and dust samples were collected from all barns. All individual samples were analysed using IS900 and F57 qPCR; fecal samples positive by either PCR and all environmental and dust samples were cultured. Overall, 8.1, 1.2 and 2.0% of cattle were positive on IS900 qPCR, F57 qPCR and bacterial culture, respectively. Young stock housed on farms with culture-positive environmental samples collected from adult cow housing and manure storage had higher odds of testing IS900 qPCR-positive than young stock housed on farms with only negative environmental samples. Furthermore, 14% of collected environmental samples, but no dust samples, were test-positive. Age of cattle in the pen was a significant predictor for environmental sample results. Young stock excreted MAP bacteria in their feces which provided strong evidence for calves as sources of within-herd transmission of MAP on dairy farms known to be infected with this organism.

Electronic supplementary material

The online version of this article (doi:10.1186/s13567-015-0192-1) contains supplementary material, which is available to authorized users.     

Mapping soil Pb stocks and availability in mainland France combining regression trees with robust geostatistics

Maps of lead (Pb) stocks in soils and estimates of its availability are needed to assess risks of contamination. Stocks in soils of total and ethylenediamine tetraacetic acid (EDTA) extractable Pb, as well as Pb availability, assessed by EDTA/total Pb ratio, were measured and calculated to a depth of 30 cm with the French soil monitoring network at sites defined by a regular 16 × 16 km grid. Setting aside punctual anomalies by winsorizing, these properties were mapped using linear mixed models (LMM). LMMs combined conditional partitioning trees upon 5 predictors (pH, texture, parent material, land use, population density) with robust geostatistics to avoid distortion due to outlying values. Rather than selecting the fixed effects according to expert-knowledge, regression trees were used to account for explanatory variables in a single classification. This original method stressed both the necessity for a geostatistical component to complement regression tree models when spatial correlation is evident, and the usefulness of these trees to interpret maps. Pb stocks varied widely with peak concentrations and availability in densely populated areas. Lithology, texture and forestation also affected total Pb stocks. With regards to availability, forestation and pH appeared as key factors.     

Virtual water: Virtuous impact? The unsteady state of virtual water

“Virtual water,” water needed for crop production, is now being mainstreamed in the water policy world. Relying on virtual water in the form of food imports is increasingly recommended as good policy for water-scarce areas. Virtual water globalizes discussions on water scarcity, ecological sustainability, food security and consumption. Presently the concept is creating much noise in the water and food policy world, which contributes to its politicization. We will argue that the virtual water debate is also a “real water” and food and agricultural policy debate and hence has political effects. Decisions about food strategies and resource allocation play out on the national political economy, benefiting some while harming others. Therefore, a policy choice for virtual water is not politically neutral. “Real␣water” interventions are, likewise, inspired by economic as well as political considerations like control of the countryside, geopolitical strategy, and food sovereignty (independence from international political conditionality and market uncertainties). To illustrate these ideas, we look into case studies of Egypt and the State of Punjab in India. In India, a debate on the merits and demerits of a virtual water strategy is now emerging. In Egypt, which switched to food imports in the early 1970s, a long-standing taboo on debating virtual water is now being relaxed.

A limited set of starch related genes explain several interrelated traits in potato

To understand the molecular basis of potato starch related traits and the underlying starch biosynthesis and degradation, a Quantitative Trait Locus (QTL) analysis in combination with a candidate gene approach was performed. The diploid mapping population C × E, consisting of 249 individuals, was assayed over two consecutive years, for chipping colour, cold induced sweetening, starch content, starch granule size, starch gelling temperature, starch enthalpy, amylose content and degree of starch phosphorylation. QTLs were observed for all traits, except enthalpy on eight out of the twelve potato chromosomes. Several QTLs were found to be consistent over 2 years. Clustering of co-localizing QTLs was observed on some chromosomes, indicating common genetic factors for the different traits. On chromosome 2, Soluble Starch Synthase 2 mapped on the same position as QTLs for starch phosphorylation, starch gelling temperature and amylose content. α-glucan, water dikinase co-localizes on chromosome 5 together with QTLs for starch phosphorylation and cold induced sweetening. Furthermore, the genes coding for two phosphorylases (StPho1a and StPho2) coincide with QTLs for starch gelling temperature, chipping colour and starch granule size on chromosome 2 and a QTL for starch phosphorylation on chromosome 9, respectively. The results suggest allelic variation acting on the genetics of the different traits.     

The impact of elevated water nitrite concentration on physiology,growth and feed intake of African catfish Clarias gariepinus (Burchell 1822)

The nitrite threshold concentration in rearing water of African catfish (Clarias gariepinus) was assessed. African catfish with an initial mean (SD) weight of 219.7 (57.8) g were exposed to an increasing range of water nitrite from 6 (Control) to 928 μM nitrite for 28 days. Mean (SD) plasma nitrite concentrations increased from 5.0 (3.6) to 32.5 (12.6) μM at 928 μM ambient nitrite. The increase in nitrite was accompanied by gradual increase in plasma nitrate from 41.6 (28.4) μM to 420.2 (106.4) μM. Haematocrit, haemoglobin, methemoglobin, plasma concentrations of cortisol, glucose, lactate, osmolality, gill morphology and branchial Na⁺/K⁺‐ATPase activity were not affected. Feed intake, final weight, SGR, FCR and mortality were not affected. We advise not to exceed a water nitrite concentration of 43 μM (0.6 mg L^?1 NO₂^?‐N) to prevent the risk of reduced growth and feed intake in African catfish aquaculture.