A network model framework for prioritizing wetland conservation in the Great Plains

Context

Playa wetlands are the primary habitat for numerous wetland-dependent species in the Southern Great Plains of North America. Plant and wildlife populations that inhabit these wetlands are reciprocally linked through the dispersal of individuals, propagules and ultimately genes among local populations.

Objective

To develop and implement a framework using network models for conceptualizing, representing and analyzing potential biological flows among 48,981 spatially discrete playa wetlands in the Southern Great Plains.

Methods

We examined changes in connectivity patterns and assessed the relative importance of wetlands to maintaining these patterns by targeting wetlands for removal based on network centrality metrics weighted by estimates of habitat quality and probability of inundation.

Results

We identified several distinct, broad-scale sub networks and phase transitions among playa wetlands in the Southern Plains. In particular, for organisms that can disperse >2 km a dense and expansive wetland sub network emerges in the Southern High Plains. This network was characterized by localized, densely connected wetland clusters at link distances (h) >2 km but <5 km and was most sensitive to changes in wetland availability (p) and configuration when h = 4 km, and p = 0.2–0.4. It transitioned to a single, large connected wetland system at broader spatial scales even when the proportion of inundated wetland was relatively low (p = 0.2).

Conclusions

Our findings suggest that redundancy in the potential for broad and fine-scale movements insulates this system from damage and facilitates system-wide connectivity among populations with different dispersal capacities.

     

Commuting distances to local non‐farm workplaces and out‐migration: The case of Northeast Thailand

The relationship between commuting distances and where people work has been studied for urban contexts in both developed countries and developing countries. However, few studies have examined the situation in rural areas, and none look at commuting distances to non‐farm workplaces in rural areas of developing countries. This paper investigates how commuting distance, and thus accessibility, to local non‐farm work influences non‐farm employment and out‐migration from rural villages in Northeast Thailand. The main issues examined are: (i) the distance that rural residents travel to work in local non‐farm jobs; and (ii) the influence that local non‐farm employment has on the number of outmigrants from rural villages. The study finds: (i) distance between villages and non‐farm work sites impact the number of villagers who are employed in regular wage work; (ii) beyond 20 km villagers are less likely to travel to non‐farm employment using their own means of transportation; and (iii) employment in regular wage work decreases outmigration. The findings from this study contribute to the debates over the drivers of rural out‐migration, rural livelihood changes, and agrarian changes that are taking place in Southeast Asia.     

Identification of QTL Affecting Protein and Amino Acid Contents in Rice

The phenotypes of protein and amino acid contents were measured in an F9 recombinant inbred line population derived from a cross between Zhenshan 97B and Delong 208. A total of 48 and 64 QTLs were identified in 2004 and 2005, respectively. The contribution of each QTL to the phenotypic variation ranged from 4.0% to 43.7%. Most QTLs co-localized, forming 29 QTL clusters on the chromosomes with three major ones detected in both years, which were mapped on chromosomes 1, 7 and 9, respectively. The two QTL clus...     

The development ofRhizoctonia solani Kühn on the underground parts of the potato plant

Summary The development of the sclerotia (black scurf) ofRhizoctonia solani Kühn, on potato tubers is related to tuber maturity and the health of the root and stolon systems. Few sclerotia formed on tubers from untreated plants until the onset of plant senescence when, as the tubers matured and roots and stolons decayed, sclerotia developed both rapidly and extensively. Application of acid to haulms in early August led to an increase in black scurf on tubers, initially related to the increase in root and stolon infection, but especially after later harvests, to the degree of tuber maturity. Later in August, scurf increases were paralleled both by tuber changes and root and stolon infection. My mid-September, when acid application was to plants becoming senescent, there was little difference between patterns of infection found on treated and check plants.

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Zusammenfassung In diesem Artikel wird der Fortlauf der Infektion durchRhizoctonia solani Kühn an Wurzeln. Stolonen und Knollen beschrieben. Ferner wird der Einfluss der Krautvernichtung und des zeitlichen Abstandes zwischen ihr und der Ernte auf diese Infektion untersucht. Pflanzknollen der Sorte Majestic wurden am Kronenende direkt vor dem Auspflanzen mit vier Isolaten vonR. solani (aus Sklerotien von Kartoffelknollen) inokuliert. An den ausgelesenen Knollen war keine Pockenkrankheit sichtbar. Das Kraut wurde an einem von fünf Daten gespritzt resp, nicht gespritzt und die Pflanzen nachher in Intervallen geerntet (Tabelle 1). Wurzel- und Stolonenteile wurden gewaschen, dann auf Leitungswasseragar, das 50 mg Neomycin und Chloramphenicol proliter enthielt, gebracht und vor der Beurteilung auf Rhizoctoniabefall w?hrend 48 Stunden bei Zimmertemperatur bebrütet. Die Pflanzknollen wurden gem?ss Tabelle 2 auf Sklerotienbefall beurteilt. Zur Reifesch?tzung wurde jede Knolle der L?nge nach geschnitten und der Prozentsatz des Periderms notiert, das mit einer Pinzette entfernt werden konnte, wenn man am Kronenende begann. Die Kontrollpflanzen hatten bis Mitte September bei nur beschr?nkter lokaler Infektion durchR. solani (Abb. 1 und 2) relativ gesunde Untergrundsysteme. In den folgenden drei Wochen reiften die Knollenperiderme. Wurzeln und Stolonen wurden weitgehend vom Pilz besiedelt. Folglich ?nderte sich die N?hrstoffversorgung des Pilzes, eine Situation, von der man weiss, dass sie die Entwicklung zur Sklerotienbildung f?rdert. Mitte September widerspiegelt sich die ?nderung in der Ern?hrung in einem Ansteigen der Anzahl von Knollen mit Pocken und in deren Ausdehnung auf den Knollen (Abb. 3 und 4). Krautvernichtung mit S?ure Anfang August führte zu einer Zunahme der Pockenkrankheit, was anf?nglich auf eine Zunahme der Wurzel- und Stoloneninfektion, sp?ter aber auf den Grad der Knollenreife (Abb. 5) in Beziehung stand.: Sp?ter, im August, wurden die Krankheitszunahmen mit Knollen?nderungen wie mit Wurzel- und Stoloneninfektion gleichlaufend. Die S?ureanwendung Mitte September geschah an alternden Pflanzen und ?nderte das an Kontrollpflanzen beobachtete Infektionsbild wenig.

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Résumé Cet article décrit l'évolution de la contamination, parRhizoctonia solani Kühn, des racines, stolons et tubercules de pommes de terre, et examine l'influence du défanage et de l'intervalle défanagerécolté sur une telle contamination. Des tubercules de la variété Majestic n'étant pas visuellement porteurs de sclérotes ont été inoculés à la couronne, juste avant la plantation, avec 4 souches deR. solani provenant de sclérotes sur tubercules de pommes de terre. Les tiges ont été ou n'ont pas été défanées à 5 dates différentes et on a récolté ensuite les tubercules à intervalles réguliers (tableau 1). Les fragments de racines et de stolons ont été lavés, placés sur une gelose à l'eau du robinet, contenant 50 mg de néomycin et de chloramphénicol par litre, et mis à incuber 48 heures à température ambiante avant notation de l'infection parR. solani. La notation des sclérotes sur tuberculesfils a été effectuée comme cela est indiqué dans le tableau 2. Comme estimation de la ‘maturité’ chaque tubercule a été coupé selon l'axe longitudinal et on a noté le pourcentage de périderme, en partant de la couronne qui a pu être enlevé avec des pinces. Les plantes témoins ont eu leurs systémes souterrains relativement sains jusqu'à la mi-septembre avec des contaminations locales parR. solani, limitées (figures 1 & 2). Les trois semaines suivantes, la maturité des tubercules a augmenté et les racines et stolons ont été fortement contaminés par le champignon. Le support nutritionnel du champignon a donc été altéré, cet élément connu permet de stimuler la maturité des sclérotes en cours de formation. Vers la mi-septembre, des changements nutritionnels se sont soldés par une augmentation du nombre de tubercules porteurs de sclérotes et par l'extension de ces derniers (figures 3 & 4). Le défanage aux colorants nitrés début ao?t a entrainé une augmentation des sclérotes, qui s'était manifestée initialement par une augmentation de la contamination des racines et stolons, et plus tard au niveau du degré de maturité du tubercule (figure 5). Plus tardivement en ao?t, l'augmentation des sclérotes allait de paire avec le changement de tubercule et avec la contamination des racines et stolons. Vers la mi-septembre, le défanage sur des plantes proches de la senescence a eu un léger effet sur la contamination des plantes témoins.

     

Retrospective analysis of the influence of environmental drivers on commercial stocks and fishing opportunities in the Irish Sea

Irish Sea fisheries have undergone considerable change in recent years following the decline of commercially important finfish stocks and their slow response to management's recovery plans. In 2015, the fishing industry called for a holistic exploration into the impact of environmental change and food web effects to identify the drivers underpinning stock dynamics. In this study, we identify correlations between large‐scale climatic indicators, temperature, primary and secondary productivity, and fish recruitment in the Irish Sea and incorporate them into an Ecopath with Ecosim food web model co‐created by scientists and fishers. Negative correlations were found between the North Atlantic Oscillation winter index (NAOw) and large zooplankton abundance and between the Atlantic Multidecadal Oscillation (AMO) and the recruitment of cod (Gadus morhua) and whiting (Merlangius merlangus). Using correlation analyses to direct the addition of environmental drivers to the Irish Sea ecosystem model improved the models fit against observed biomass and catch data and revealed the indirect impacts of environmental change as mitigated through trophic interactions. Model simulations suggest that historic environmental change suppressed the overall production of commercial finfish, limiting opportunities for the fishing industry, whilst also dampening the rate of stock recovery despite marked reductions in fishing effort. These results suggest that failure to account for ecosystem information may lead to misconceived expectations and flawed fisheries management; therefore, there is a need to operationalize ecosystem information through management procedures to support fisheries advice.     

VARIATION IN SUMMER DORMANCY AMONG COLLECTIONS OF PHALARIS TUBEROSA AT DAVIS, CALIFORNIA

The summer-donnancy period among collections of Phalaris tuberosa L. from the eastern Mediterranean region when grown at Davis, California, ranged from 30 to 127 days. Plants from the more arid sites of origin tended to exhibit the longer dormancy. There were exceptions, however, and these, together with the diversity of behaviour in this material, suggest that genotypes with a potential for increased summer growth may be selected for use on rangelands.     

Identification of genetic regions associated with black point in barley

Black point (BP) can cause severe losses to the barley industry through downgrading and discounting of malting barley. The genetic improvement in BP resistance of barley is complex, requiring reliable screening tools, an understanding of genotype by environment interactions and an understanding of the biochemical mechanisms of melanisation involved in BP development. Thus the application of molecular markers for resistance to BP may be a useful tool for plant breeders. We have investigated the genetic regions associated with BP resistance in the barley F₂ population, Valier/Binalong. Quantitative trait loci (QTLs) contributed by the resistant parent Valier, were detected on chromosomes 2HS, 2HC, 3HL, 4HL and a QTL contributed by the susceptible parent, Binalong was detected on 5HL. Three of the four QTLs were detected in two distinctly different environments. The differences observed in BP resistance between these two environments and the implications for accelerated screening are discussed. Identified SSR markers in these regions may be useful for selecting black point resistance in related breeding materials.     

Correlation of fluridone and dye concentrations in water following concurrent application

Herbicide residue samples are expensive and time-consuming to collect and analyze. To test whether Rhodamine WT dye could simulate the dissipation of fluridone, concurrent applications of the chemicals were made in the weed-infested Three Sisters tidal canals (Citrus Co. Fl) and a shallow lake in the Upper St Johns River, Florida. Dye concentrations were measured using a field fluorometer and fluridone concentrations were analyzed by an HPLC method. The coefficient of correlation between dye and herbicide was 0.99 in the canals and 0.93 in Lake Hell ‘n’ Blazes (Upper St Johns River) over 340 and 93 h respectively. Half-lives of the chemicals were not significantly different for either site. The importance of these data in relation to herbicide registration is discussed.     

Effect of a valine residue at codon 352 of the VP2 capsid protein on in vivo replication and pathogenesis of Aleutian disease parvovirus in mink

OBJECTIVE: To determine whether a group of 3 genetic differences in the nonstructural protein (NS1) or 1 genetic difference in the structural protein (VP2) of Aleutian disease parvovirus (ADV) is responsible for an increase in the in vivo replication and pathogenicity of G/U-8, a chimera of ADV-G (nonpathogenic) and ADV-Utah (pathogenic), compared with G/U-10. ANIMALS: 32 eight-month-old female sapphire mink (Mustela vison). PROCEDURE: Chimeric viruses were constructed, propagated in vitro, and used to inoculate mink. Antiviral antibody responses, presence of serum viral nucleic acid, and serum gamma globulin concentrations were monitored for 120 days following inoculation. Histologic examination of the liver, kidneys, spleen, and mesenteric lymph nodes was performed after necropsy. RESULTS: A chimera containing only the 3 amino acid substitutions in NS1 did not elicit measurable responses indicative of replication or pathogenicity in inoculated mink. Serum antiviral antibody responses, frequency of detection of viral nucleic acid in serum, gamma globulin response, and histologic changes in mink inoculated with chimeras containing a valine residue at codon 352 (352V) of VP2 capsid were increased, compared with values from mink inoculated with chimeric viruses that did not contain 352V. CONCLUSIONS AND CLINICAL RELEVANCE: A valine residue at codon 352 in the VP2 capsid protein of ADV affects in vivo viral replication and pathogenicity. This amino acid may be part of an incompletely defined pathogenic determinant of ADV. Further characterization of the pathogenic determinant may allow future development of focused preventive and therapeutic interventions for Aleutian disease of mink.