The genetic landscape of the childhood cancer medulloblastoma

Medulloblastoma (MB) is the most common malignant brain tumor of children. To identify the genetic alterations in this tumor type, we searched for copy number alterations using high-density microarrays and sequenced all known protein-coding genes and microRNA genes using Sanger sequencing in a set of 22 MBs. We found that, on average, each tumor had 11 gene alterations, fewer by a factor of 5 to 10 than in the adult solid tumors that have been sequenced to date. In addition to alterations in the Hedgehog and Wnt pathways, our analysis led to the discovery of genes not previously known to be altered in MBs. Most notably, inactivating mutations of the histone-lysine N-methyltransferase genes MLL2 or MLL3 were identified in 16% of MB patients. These results demonstrate key differences between the genetic landscapes of adult and childhood cancers, highlight dysregulation of developmental pathways as an important mechanism underlying MBs, and identify a role for a specific type of histone methylation in human tumorigenesis.     

Use of aglepristone for the treatment of P4 induced insulin resistance in dogs

Insulin resistance (IR) in dogs is suspected when hyperglycemia is present despite administration of insulin doses greater than 1.0 to 1.5 UI/kg. IR is caused by increases in counter regulatory hormones concentrations (glucagon, glucocorticoids, catecholamines and growth hormone). This study was conducted to investigate the use of aglepristone (RU 46534), a P₄ receptor antagonist, for the treatment of IR diabetes mellitus in bitches during the luteal phase. All animals were treated with porcine insulin zinc suspension (Caninsulin) and aglepristone (Alizin) 10 mg/kg subcutaneously at day 1, 2, 9 and 17 from diagnosis. At day 5, no significant variation in glycemia was shown. At day 12 and 20, serum glucose concentrations were significant lower (p < 0.05). From day 12 the insulin dose was reduced to 0.8 IU BID. Insulin was reduced in the following weeks and glycemia was controlled.     

Results of an online questionnaire to survey calf management practices on dairy cattle breeding farms in Austria and to estimate differences in disease incidences depending on farm structure and management practices

Background

Calf disease may result in great economic losses. To implement prevention strategies it is important to gain information on management and to point out risk factors. The objective of this internet based survey was to describe calf management practices on registered dairy breeding farms in Austria and to estimate differences in calf disease incidences depending on farm structure and management practices.

Results

A total of 1287 questionnaires were finally analysed (response rate 12.2 %). Herd characteristics and regional distribution of farms indicated that this survey gives a good overview on calf management practices on registered dairy farms in Austria. The median number of cows per farm was 20 (interquartile range 13–30). Significant differences regarding farm characteristics and calf management between small and large farms (≤20 vs >20 cows) were present. Only 2.8 % of farmers tested first colostrum quality by use of a hydrometer. Storing frozen colostrum was more prevalent on large farms (80.8 vs 64.2 %). On 85.1 % of the farms, whole milk, including waste milk, was fed to the calves. Milk replacer and waste milk were more often used on large farms. In accordance with similar studies from other countries, calf diarrhoea was indicated as the most prevalent disease. Multivariable logistic regression analysis revealed that herd size was associated with calf diarrhoea and calf respiratory tract disease, with higher risk of disease on large farms. Furthermore, feeding waste milk to the calves was associated with increasing calf diarrhoea incidence on farm. In the final model with calf respiratory tract disease as outcome, respondents from organic farms reported less often a respiratory tract disease incidence of over 10 % compared with conventional farms [odds ratio (OR) 0.40, 95 % confidence interval (CI) 0.21–0.75] and farmers that housed calves individually or in groups after birth significantly reported more often to have an incidence of respiratory tract disease >10 % compared with farms where all calves were housed individually (OR 2.28, 95 % CI 1.16–4.48).

Conclusion

The results obtained in this study provide an overview on calf management on dairy breeding farms in Austria and may help to further point out areas to be improved on farm.

Electronic supplementary material

The online version of this article (doi:10.1186/s13028-015-0134-y) contains supplementary material, which is available to authorized users.     

Antibody response in sheep experimentally infected with different small ruminant lentivirus genotypes

Two groups of sheep were experimentally infected by intratracheal route with two small ruminant lentivirus (SRLV) isolates belonging to different genotypes (It-561 genotype A3 and It-Pi1 genotype B2). Seroconversion was evaluated using recombinant homologous and heterologous matrix protein/capsid antigen fusion protein. Results clearly indicate that seroconversion against homologous antigen was detected well in advance as regards heterologous antigen in both groups, although the advantage of using homologous antigen was less evident in detecting seroconversion against the caprine arthritis encephalitis virus (CAEV)-like strain, compared with the maedi-visna virus (MVV)-like infection. Commercially available ELISAs detect CAEV-like seroconversion earlier than MVV-like infection suggesting a closer relationship between CAEV-like isolate and the antigen used in the latter ELISA tests. Seven recombinant subunits developed from matrix protein and capsid antigen of strain K1514 (prototype A1) were used to better define the antibody response in sheep infected with It-561 isolate. Two animals clearly reacted against type specific epitopes in the early stage of infection. This study highlights the relative insensitivity of gag encoded cross-reacting epitopes during the early stage of infection and suggests the development of novel diagnostic tests based on both genotype specific antigens.     

Comparison of four peribulbar anaesthetic techniques: a preliminary study in equine cadavers

ObjectiveTo compare the peribulbar injectate distribution and probability of regional anaesthesia of four peribulbar anaesthetic techniques in equine cadavers.Study designProspective experimental cadaver study.AnimalsA total of 12 isolated equine cadaver heads and 24 eyes.MethodsThe 24 orbits underwent one of four injection techniques (six orbits each) with a mixture (1:4) of contrast medium and saline (CM): 20 mL ventrolateral peribulbar injection (V-20), 20 mL dorsolateral peribulbar injection (D-20), combined ventrolateral and dorsolateral peribulbar injections 10 mL each (VD-20) or 20 mL each (VD-40). To evaluate and score CM distribution at the base of, within the extraocular muscle cone (EOMC), and around the optic nerve (before and after pressure application to the periorbital area), computed tomography was performed. To assess the probability of achieving locoregional anaesthesia, two criteria were applied and both scored as ‘likely’, ‘possible’ or ‘unlikely’. To compare CM distribution scores between injection techniques, Kruskal-Wallis analysis of variance was used. Mann-Whitney U test was used for post hoc comparisons between groups when needed. A p value < 0.05 was considered significant.ResultsThe CM distribution within the EOMC and around the optic nerve circumference was detected as ‘possible’ only after pressure application in seven out of 24 orbits (V-20, 3; D-20, 1; VD-40, 3). It was never considered ‘likely’ either before or after pressure application. The CM distribution at the EOMC base was considered ‘likely’ to provide regional anaesthesia in 50% (V-20), 0% (D-20), 33% (VD-20), 100% (VD-40) and in 66% (V-20), 16% (D-20), 50% (VD-20), 100% (VD-40) before and after applying pressure, respectively.Conclusions and clinical relevanceComplete regional anaesthesia seems more likely using the VD-40 technique, although the authors advise caution due to the risk of potential complications. Future studies are necessary to evaluate the efficacy of the technique in vivo.     

An integrated approach for cetacean knowledge and conservation in the central Mediterranean Sea using research and social media data sources

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Mesquite bean (Prosopis juliflora) meal in diets of Nile tilapia (Oreochromis niloticus): Nutritional value,growth, physiological responses and health

Two experiments were conducted to assess the nutritional value and potential use of mesquite bean (Prosopis juliflora) meal (MBM) to substitute corn in extruded diets for Nile tilapia (Oreochromis niloticus). Digestible energy and the content of protein, soluble carbohydrates and amino acids were measured for 160 Nile tilapia juveniles (average weight 25.58 ± 5.52 g), allocated to eight treatment groups (four fed the experimental diet, and four fed a reference diet). To determine the inclusion potential of MBM, 384 fish (average weight 21.85 ± 1.01 g) were used and allocated to 24 tanks (1,000 L capacity). The experimental design was completely randomized with six levels of substitution (0%, 20%, 40%, 60%, 80% and 100%), and four repetitions. After the feeding experiment, tissue samples (blood, liver, muscle and intestine) were used to analyse metabolic and haematological variables. MBM produced apparent digestibility coefficients (ADC) similar to those of traditional diet ingredients: 81.85% dry matter (DM), 83.02% crude energy, 88.57% crude protein, 82.88% lysine and 82.57% methionine. Differences were observed in the digestibility of soluble carbohydrates (p < 0.05), with MBM having higher levels of starch (72.19%) and sucrose (88.99%). A 20% substitution with MBM produced a decrease in zootechnical performance (p < 0.05). Enzymatic activity of amylase and sucrose seemed to be induced in response to the proportion of their respective substrate in the diets. We observed a reduction in the efficiency of dietary protein utilization, with reduced levels of plasma amino acids (p < 0.05), owing to the increase in the enzymatic activity of muscular alanine and aspartate transaminases (ALT and AST) and the deaminase glutamate dehydrogenase in the hepatic and muscular tissues. Haematological variables did not indicate any adverse effects of MBM on the health status or survival of the fish (100%). Therefore, we conclude that MBM may be a viable alternative to corn meal in the diet, enabling substitution of up to 20%.     

The budget of nitrogen in the grow‐out of the Amazon river prawn (Macrobrachium amazonicum Heller) and tambaqui (Colossoma macropomum Cuvier) farmed in monoculture and in integrated multitrophic aquaculture systems

This work determined the nitrogen inputs, outputs and accumulation in compartments of stagnant earthen ponds for the monoculture and integrated multi‐trophic aquaculture (IMTA) of the Amazon river prawn (Macrobrachium amazonicum) and tambaqui (Colossoma macropomum), using recycled hypereutrophic water. A completely randomized experiment was designed with four treatments and three replications: PM–monoculture with 30 prawns/m², FM ‐ monoculture with 3 fish/m², IMTA ‐ polyculture with 30 prawns/m² and 30 fish/m² free, POLY‐CAGE ‐ polyculture with 30 prawns/m² free and 40 fish/m³ in net‐cages. Animals, rain, water, feed, soil, gas, accumulated sludge, and suspended sediments were collected throughout the experiment to determine their nitrogen contents and to calculate the nitrogen budget. Results showed that much of the nitrogen available escapes to atmosphere as N₂ (~40%–56%) after denitrification or accumulated within bottom sludge (~14%–42%). The remaining nitrogen was converted in animal biomass (~5%–21%) or was discharged to receiving waterbodies in the outlet water (~11%–13%). Feed management appeared to influence the major biological processes in the aquatic nitrogen cycle, such as photosynthesis and denitrification. The fish‐prawn IMTA systems converted approximately 53%–75% of feed nitrogen into harvestable products, which is more efficient than the 19%–46% of feed nitrogen converted in the monocultures. However, a large amount of nitrogen is accumulated in the pond bottom in all systems. An increased prawn density or the addition of a mud‐feeder species to the culture may enhance the incorporation of this material in harvested biomass, improving the efficiency of the systems.