Identification of candidate genes for paratuberculosis resistance in the native Italian Garfagnina goat breed

Paratuberculosis disease is a chronic bacterial disease infection of ruminants of global relevance, caused by MAP (Mycobacterium avium subsp. paratuberculosis). The present study was conducted on the Garfagnina goat breed that is an Italian native goat population registered on the Tuscan regional repertory of genetic resources at risk of extinction. Forty-eight adult goats (27 serologically positive to MAP-positive and 21 serologically negative to MAP-negative) belonging to a single flock that had experienced annual mortalities due to MAP infection were identified and genotyped with the Illumina GoatSNP60 BeadChip. Diagnosis was achieved by serological tests, as well as post-mortem examination of affected animals. A genome-wide scan was then performed on the individual marker genotypes, in an attempt to identify genomic regions associated with MAP infection disease. Nine significant markers were highlighted and they were located within, or nearby, annotated genes. Two genes found in this study encode are linked to protein kinases that are among the most important enzymes involved in the immune response to Johne’s disease, and four genes are involved in the functions of the Golgi complex.     

Nitrogen dynamics in soil solution under different land uses: Atlantic forest and cacao–cabruca system

In the southern region of Bahia, a large portion of the Atlantic Forest was occupied by the cacao–cabruca system, which is implemented after the complete removal of the understory vegetation without altering the canopy. The objective of this study was to determine the nitrogen concentration in the soil solution in two micro-basins; one with the cacao–cabruca system and one in the Atlantic forest in the southern region of the state of Bahia. Samples were collected weekly during two periods, from September to December 2012 and from April to June 2013, using sample extractors installed in the micro-basins at 15, 45 and 90 cm. The inorganic forms in the soil solutions were analyzed through ion chromatography, total nitrogen was analyzed using spectrophotometry and mineralization and nitrification rates were analyzed using the laboratory incubation method. Among the nitrogen forms analyzed in the cacao–cabruca soil solution, the dissolved organic nitrogen prevailed among the rain classes in the three depths. In the forest, nitrate predominated at 15 cm, while the organic nitrogen prevailed in the other depths. The highest mineralization and nitrification rates were recorded in the forest. Of the inorganic nitrogen forms analyzed in the soil, ammonium concentrations showed higher rates than nitrate in both areas. Low inorganic nitrogen concentrations in the cabruca soil solution are associated with low mineralization and nitrification rates. Thus we can conclude that even if some studies point towards the environmental efficiency of this system, there are differences in the N forms in the forest and cacao–cabruca areas.     

Biodegradation and Detoxification Efficiency of Azo-Dye Reactive Orange 16 by <Emphasis Type="Italic">Pichia kudriavzevii</Emphasis> CR-Y103

In consideration of the hazards associated with the presence of the textile azo-dye and their biotransformation products in the environment, the goal of this work was to study bioremediation process by the yeast strain Pichia kudriavzevii CR-Y103 related to the ability to degrade and detoxify the sulfonated Reactive Orange 16 azo-dye. In experimental conditions, the optimal inoculum/dye concentration ratio required for complete decolorization (100%) of culture medium and biomass within 24 h has been 1 g L^?1 yeast cell (dry weight)/50 mg L^?1 Reactive Orange 16. In the presence of 400 mg L^?1 of Reactive Orange 16 (RO16), 95% of the dye was removed after 72 h of incubation. Also, the yeast strain could decolorize other eight textile dyes (56.48–99.98% decolorization within 24 h). NADH-DCIP reductase and azo reductase activities were significantly increased (ca. 5.4 times and ca. 37 times, respectively) during the decolorization process. UV-VIS spectra, high-performance liquid chromatography (HPLC), and Fourier transform infrared spectroscopy (FTIR) analysis confirmed the presence of new biotransformation products in extracted metabolites, highlighting the partial biodegradation of the dye by the new yeast isolate. The phytotoxicity evaluation strongly supported the decreased toxicity of biodegraded products as minor inhibition on germination (%), root and shoots elongation of T. pratense L. and T. aestivum L. seedlings. Increasing of mitotic index value and decreasing the frequency of chromosomal aberrations in tested plant meristem cells treated with biodegraded products, compared with RO16 treatment (500 ppm), confirmed their slightly toxic nature. A cell viability assay also confirmed the reduced toxicity of biodegraded products on healthy monkey kidney cells (Vero cells).     

Lethal and sublethal responses of <Emphasis Type="Italic">Sitophilus zeamais</Emphasis> populations to essential oils

The present study aimed to assess the lethal and sublethal responses of five populations of S. zeamais to the essential oils of Ocimum basilicum and Piper hispidinervum, through toxicity, locomotor behavior (flight and walking activities) and physiological (respiration rate and body mass) evaluations. The populations of S. zeamais were obtained from Machado—MG, Paracatu—MG, Piracicaba—SP, Recife—PE and Tunápolis—SC. To estimate the LC₅₀ of each oil for each population, fumigation tests were performed. The population from Recife exhibited the lowest instantaneous rate of increase (ri) as well the lowest consumption of grain mass. However, Piracicaba was considered the susceptibility pattern, presenting the lowest LC₅₀ for both essential oils, no statistical difference was observed among populations or treatments in the flight activity bioassays. The essential oils effect on walking activity and respiration rates varied among populations. The population from Recife presented the highest walked distance and walk speed, with the lowest resting time and number of stops, as well as the lowest respiration rate and body mass. The present study highlights the importance of the study on population responses, as the five populations of S. zeamais exhibited different patterns of toxic and behavioral effects when subjected to the essential oils of P. hispidinervum and O. basilicum.     

Expression of adipokines and adipocytokines by epidural adipose tissue in cauda equina syndrome in dogs

BackgroundCompression of epidural adipose tissue (EAT) within the scope of cauda equina syndrome (CES) could lead to an enhanced expression of inflammatory mediators, possibly contributing to pain amplification in dogs.ObjectivesTo analyze expression of inflammatory adipo(‐cyto)kines within the EAT of dogs with CES.AnimalsClient‐owned dogs: 15 dogs with CES and 9 dogs euthanized for unrelated medical reasons (controls).MethodsProspective, experimental study. Epidural adipose tissue and subcutaneous adipose tissue were collected during dorsal laminectomy and used for real‐time quantitative polymerase chain reaction. Tissue explants were cultured for measurements of inflammation‐induced release of cytokines.ResultsResults show a CES‐associated upregulation of the cytokines tumor necrosis factor alpha (TNFα: mean ± SD: 18.88 ± 11.87, 95% CI: 10.90‐26.86 vs 9.66 ± 5.22, 95% CI: 5.29‐14.02, *: P = .04) and interleukin‐ (IL‐) 10 (20.1 ± 9.15, 95% CI: 14.82‐25.39 vs 11.52 ± 6.82, 95% CI: 5.82‐17.22, *: P = .03), whereas the expression of the adipokine leptin was attenuated in EAT of dogs with CES (3.07 ± 2.29, 95% CI: 1.80‐3.34 vs 9.83 ± 8.42, 95% CI: 3.36‐16.30, **: P = .007). Inflammatory stimulation of EAT explant cultures resulted in an enhanced release of IL‐6 (LPS: 5491.55 ± 4438, 95% CI: 833.7‐10 149; HMGB1: 1001.78 ± 522.2, 95% CI: 518.8‐1485; PBS: 310.9 ± 98.57, 95% CI: 228.5‐393.3, ***: P < .001).Conclusion and Clinical ImportanceExpression profile of inflammatory adipo(‐cyto)kines by EAT is influenced from compressive forces acting in dogs with CES and might contribute to amplification of pain.