Environmental Conditions and Channel Catfish Ictalurus punctatus Production under Similar Pond Management Regimes in Alabama and Mississippi

This study was conducted to compare water quality and channel catfish production in earthen ponds located in two dissimilar physiographic regions of the southeastern United States and supplied with water of disparate quality. Ponds at Auburn, Alabama are on acidic Piedmont soils and filled with poorly mineralized runoff water; ponds at Stoneville, Mississippi are on slightly alkaline alluvial clays and filled with groundwater of high total alkalinity and hardness. Channel catfish were stocked at 8,750 fish/ha, fed daily, and provided nightly aeration in 0.04-ha ponds at both sites. Ponds were managed as similarly as possible. Minimum daily water temperatures and pH were higher at Stoneville than at Auburn, and there were greater concentrations of suspended clay turbidity, dissolved inorganic phosphorus, total ammonia-nitrogen, and nitrite-nitrogen at Auburn than at Stoneville. The taxonomic composition of the phytoplankton community was broadly different between the two sites. Taste tests revealed off-flavor in fish at both sites, but there were no significant differences (P > 0.05) in flavor scores between sites. The quality of flavor was somewhat different between sites, and these differences in quality were thought to result from observed differences in the taxonomic composition of phytoplankton communities. All differences in water quality seemed to be directly or indirectly related to the dissimilarity in the quality of the water supply and soils at the two locations. Although some water quality variables differed between sites and changed over time at both sites, environmental conditions never deteriorated enough at either site to cause serious stress or mortality in fish. There were no significant differences (P > 0.05) in average net fish production, survival, weight of individual fish at harvest, or feed conversion ratios. Average net fish production and feed conversion ratios, respectively, were 4,905 kg/ha and 1.27 at Auburn and 5,286 kg/ha and 1.27 at Stoneville. The results of this study demonstrate the need for site-specific investigations when conducting certain types of aquaculture research.     

Functional CpG methylation system in a social insect

DNA methylation systems are well characterized in vertebrates, but methylation in Drosophila melanogaster and other invertebrates remains controversial. Using the recently sequenced honey bee genome, we present a bioinformatic, molecular, and biochemical characterization of a functional DNA methylation system in an insect. We report on catalytically active orthologs of the vertebrate DNA methyltransferases Dnmt1 and Dnmt3a and b, two isoforms that contain a methyl-DNA binding domain, genomic 5-methyl-deoxycytosine, and CpG-methylated genes. The honey bee provides an opportunity to study the roles of methylation in social contexts.     

Population demography and fecundity do not decline with habitat fragmentation in the rainforest tree Macadamia integrifolia (Proteaceae)

Habitat fragmentation is often associated with reduced levels of fitness and local extinction of plant species, and consequently poses a major threat to the persistence of species worldwide. The majority of demography-based fragmentation studies to date have focussed primarily on fragmentation impacts on individual plant fecundity. Here we investigate the impact of habitat fragmentation on the demography (plant height classes and density) and key population dynamic processes for the rainforest tree species Macadamia integrifolia (Proteaceae). Raceme and fruit production and seedling emergence across fragmented sites exceeded that in more intact sites with no apparent difference in short-term mortality rates. Fecundity of flowering trees did not appear to be affected by fragmentation. Instead, overall reproductive output in fragmented sites was enhanced relative to undisturbed sites due to a higher proportion of reproductively active individuals. The probability of flowering and fruiting was negatively correlated with the projected foliage cover (PFC) surrounding individual trees, and average PFC was significantly lower in small and medium fragments, suggesting light availability as a potential contributor to the trends observed here.This study demonstrates that the short-term effects of habitat fragmentation on population viability may not necessarily be detrimental for some species, and highlights the importance of assessing not only the fecundity of flowering individuals but also the proportion of individuals reproducing within fragments.     

Alkalinity and Hardness: Critical but Elusive Concepts in Aquaculture

Total alkalinity and total hardness are familiar variables in aquatic animal production. Aquaculturists—both scientists and practitioners alike—have some understanding of the two variables and of methods for adjusting their concentrations. The chemistry and the biological effects of alkalinity and hardness, however, are more complex than generally realized or depicted in the aquaculture literature. Moreover, the discussions of alkalinity and hardness—alkalinity in particular—found in water chemistry texts are presented in a rigorous manner and without explanation of how the two variables relate to aquaculture. This review provides a thorough but less rigorous discussion of alkalinity and hardness specifically oriented toward aquaculture. Alkalinity and hardness are defined, their sources identified, and analytical methods explained. This is followed by a discussion of the roles of the two variables in aquaculture, including their relationships with carbon dioxide, pH, atmospheric pollution, ammonia, and other inorganic nitrogen compounds, phytoplankton communities, trace metals, animal physiology, and clay turbidity. Liming and other practices to manage alkalinity and hardness are explained. Changes in alkalinity and hardness concentrations that occur over time in aquaculture systems are discussed. Emphasis is placed on interactions among alkalinity, hardness, water quality, and aquacultural production.     

Prevention of organ allograft rejection by a specific Janus kinase 3 inhibitor

Because of its requirement for signaling by multiple cytokines, Janus kinase 3 (JAK3) is an excellent target for clinical immunosuppression. We report the development of a specific, orally active inhibitor of JAK3, CP-690,550, that significantly prolonged survival in a murine model of heart transplantation and in cynomolgus monkeys receiving kidney transplants. CP-690,550 treatment was not associated with hypertension, hyperlipidemia, or lymphoproliferative disease. On the basis of these preclinical results, we believe JAK3 blockade by CP-690,550 has potential for therapeutically desirable immunosuppression in human organ transplantation and in other clinical settings.     

Rheological Properties of Vital Wheat Gluten Suspensions

Flour and doughs represent rheologically complex materials whose properties are dependent on many factors including processing conditions. To avoid some of the problems associated with the rheological characterization of dough, we have initiated a study focused on the rheological properties of one of the major components of dough, vital wheat gluten. Suspensions of vital wheat gluten were prepared with concentrations of 225–325 mg/mL.The moduli of the gluten suspensions was 0.2 Pa at 225 mg/mL to 37 Pa at 325 mg/mL. At <250 mg/mL, the gluten suspensions exhibited fluidlike behavior. The crossover frequency, (G′[ω] = G″[ω]) shifted slightly from 0.5 rad/sec at 225 mg/mL to 0.9 rad/sec at 250 mg/mL. At >300 mg/mL, the gluten suspensions exhibited solidlike behavior. The crossover frequencies were independent of concentration and equal to 100 rad/sec. At <250 mg/mL, the high‐frequency behavior of moduli were proportional to ω^3/4, as expected for a semiflexible coil. At >300 mg/mL, the high‐frequency behavior of moduli were proportional to ω^1/2, indicating a flexible coil. These results suggest vital wheat gluten suspensions undergo a structural change between 250 and 300 mg/mL.     

Epizootics of metazoan gill parasites did not threaten feasibility of farming southern bluefin tuna (Thunnus maccoyii) in a trial extending over summer months

Tuna farming off Port Lincoln, Australia, involves catching wild 2–4-year-old southern bluefin tuna in summer and then fattening for periods of 2–8 months. As fresh product is not available year-round, the feasibility of maintaining tuna for longer periods was trialled, including over a summer season, when temperatures may exceed 24 °C. As the rates of growth and reproduction in ectoparasites of fishes are usually most rapid during warm temperatures, parasite epizootics at this time may adversely affect the health of tuna. We collected epidemiological data on burdens of metazoans on the gills of tuna from the time of stocking in April 2005 through to final harvest in August 2006 (N = 220). We document an epizootic of the copepod Pseudocycnus appendiculatus, characterised by a significant increase in both prevalence and mean intensity in the first winter, followed by a decline in these parameters over the next 12 months. This epizootic pattern appears to be independent of seasonal changes in temperature. For two other species, a second copepod (Euryphorus brachypterus) and a polyopisthocotylean flatworm (Hexostoma thynni), there were no clearly discernible trends in infections. As the high water temperatures over the summer period did not lead to increased infections of any species of gill parasites, we conclude that they do not threaten the feasibility of farming of Thunnus maccoyii.     

The evolutionary relationship between bere barley and other types of cultivated barley

Genetic Resources and Crop Evolution - We used genotyping-by-sequencing to investigate the evolutionary history of bere, the oldest barley variety still cultivated in Britain and possibly in all of...     

Inheritance of fenvalerate and carbofuran resistance in colorado beetles—Leptinotarsa decemlineata (Say)—from North Carolina

Progeny from reciprocal F1 crosses and F1 backcrosses between fenvalerate-resistant and fenvalerate-susceptible Colorado beetles, Leptinotarsa decemlineata (Say), and between carbofuran-resistant and carbofuran-susceptible Colorado beetles were bioassayed to investigate the mode of inheritance of resistance to these chemicals. Bioassays of progeny from these crosses indicate that resistance to fenvalerate is inherited in a semi-recessive, sex-linked manner and carbofuran resistance is inherited in a partially dominant autosomal fashion. Log concentration/probit mortality lines and chi-square tests, however, indicate that multiple genes may be involved in resistance to both insecticides.