A Bayesian multinomial model for analyzing categorical habitat selection data

Modeling the number of uses of discrete habitat types by animals with a multinomial distribution, we illustrate the use of Bayesian methods to estimate selection. An advantage of this approach in assessing selection is the construction of credibility intervals that do not rely on large sample normal theory. In addition, credibility intervals for ranked selection of habitats are easily obtained. Bayes factors and Bayesian p values (posterior predictive values) are used to test the hypothesis of selection for each animal, test selection across all animals and for multiple comparisons among habitats. We compare our method to alternative methods for a real dataset. Freely available WinBUGS software is used to fit the model and test hypotheses.     

Risk factors for excessive tibial plateau angle in large-breed dogs with cranial cruciate ligament disease

OBJECTIVE: To identify risk factors for development of excessive tibial plateau angle (TPA) in large-breed dogs with cranial cruciate ligament disease (CCLD). DESIGN: Case-control study. ANIMALS: 58 dogs with excessive TPAs (ie, TPA >or= 35 degrees ; case dogs) and 58 dogs with normal TPAs (ie, TPA or= 35 degrees in both limbs were 13.6 times (95% confidence interval, 2.72 to 68.1) as likely to have been neutered before 6 months of age as were control dogs with TPA 相似文献   

Identification of Eusynstyelamide B as a Potent Cell Cycle Inhibitor Following the Generation and Screening of an Ascidian-Derived Extract Library Using a Real Time Cell Analyzer

Ascidians are marine invertebrates that have been a source of numerous cytotoxic compounds. Of the first six marine-derived drugs that made anticancer clinical trials, three originated from ascidian specimens. In order to identify new anti-neoplastic compounds, an ascidian extract library (143 samples) was generated and screened in MDA-MB-231 breast cancer cells using a real-time cell analyzer (RTCA). This resulted in 143 time-dependent cell response profiles (TCRP), which are read-outs of changes to the growth rate, morphology, and adhesive characteristics of the cell culture. Twenty-one extracts affected the TCRP of MDA-MB-231 cells and were further investigated regarding toxicity and specificity, as well as their effects on cell morphology and cell cycle. The results of these studies were used to prioritize extracts for bioassay-guided fractionation, which led to the isolation of the previously identified marine natural product, eusynstyelamide B (1). This bis-indole alkaloid was shown to display an IC₅₀ of 5 µM in MDA-MB-231 cells. Moreover, 1 caused a strong cell cycle arrest in G2/M and induced apoptosis after 72 h treatment, making this molecule an attractive candidate for further mechanism of action studies.     

Missing OH reactivity in a forest: evidence for unknown reactive biogenic VOCs

Forest emissions of biogenic volatile organic compounds (BVOCs), such as isoprene and other terpenes, play a role in the production of tropospheric ozone and aerosols. In a northern Michigan forest, the direct measurement of total OH reactivity, which is the inverse of the OH lifetime, was significantly greater than expected. The difference between measured and expected OH reactivity, called the missing OH reactivity, increased with temperature, as did emission rates for terpenes and other BVOCs. These measurements are consistent with the hypothesis that unknown reactive BVOCs, perhaps terpenes, provide the missing OH reactivity.     

Passive immunity and serological immune response in dairy calves associated with natural Giardia duodenalis infections

In a previous study, Giardia infection patterns were studied in newborn dairy calves over a 4-month period. Chronic Giardia infections were observed in all calves with initial cyst excretion occurring at approximately 1 month of age. In the work presented here, the passive immunity and serological immune response associated with these Giardia infections were examined. Colostrum and milk samples were collected from the dams of these calves, and monthly serum samples were collected from each calf. The colostrum, milk and sera samples were analyzed by ELISA and Western blot for the presence of anti-Giardia IgG antibodies. In addition, the in vitro anti-Giardia activity of milk and colostrum was examined using a miniculture adherence assay. When examined by ELISA, mean anti-Giardia antibody titres were found to be significantly higher in colostrum compared to milk. The monthly mean serum antibody titres in the calves were not found to differ significantly at any time point during the study. Western blot analysis revealed that colostrum from the dams reacted strongly with many different Giardia antigens between 205 and 7.5kDa, while milk reacted with few antigens in the same size range. Sera collected from the calves when 30 and 60 days of age reacted with few Giardia antigens, but as the calves aged, IgG antibodies in their sera began to react with antigens of 21, 50, 65, 73 and 79kDa. The miniculture adherence assay demonstrated that colostrum had significantly more anti-Giardia activity in vitro compared to milk. These results suggest that the calves in this dairy did not mount a significant humoral immune response against Giardia following infection. However, colostrum contained a high level of anti-Giardia antibodies and exhibited anti-Giardia activity in vitro. Therefore, colostrum may have the potential to provide initial protection against Giardia infections in calves, but the lack of a strong, specific humoral immune response by these calves could account for the high prevalence and chronic duration of the infections.     

The use of lung biopsy to determine early lung pathology and its association with health and production outcomes in feedlot steers

The objectives of this study were to determine if percutaneous lung biopsy can be used to characterize early pathologic changes in bovine lung associated with bovine respiratory disease (BRD), to determine if specific infectious respiratory pathogens can be identified in association with these changes, and to determine whether pulmonary pathology at arrival and at the time of initial diagnosis are associated with health and production outcomes. One hundred auction-market derived crossbred steer calves from a commercial feedlot in southern Alberta were included in this study. A percutaneous lung biopsy technique was used to obtain lung samples from the right middle lung. Steers were sampled 295 times yielding 283 samples with 210 (74%) containing lung tissue. Overall, histopathological changes were observed in 20 (9.5%) of lung biopsy samples. There were too few samples with pathology to reveal an association between lung pathology and subsequent health events. In general, percutaneous lung biopsy can be done safely on feedlot steers in a commercial feedlot setting with few clinical side effects. This technique did not prove useful as a diagnostic tool or prognostic indicator for early BRD. However, it may be useful for the diagnosis of BRD in targeted populations of commercial feedlot steers.     

Susceptibility of lesser mealworm (Coleoptera: Tenebrionidae) adults and larvae exposed to two commercial insecticides on unpainted plywood panels

BACKGROUND: The susceptibilities of adult and larval lesser mealworms, Alphitobius diaperinus (Panzer), to two commercially formulated insecticides, cyfluthrin and tetrachlorvinphos, were examined through exposure on treated plywood panels. Lesser mealworms were collected from four caged-layer poultry farms, three in New York and one in Maine. An additional strain was obtained from an infestation occurring in a cricket colony.RESULTS: In all poultry farm derived strains, a portion of the population (1.8-16.2%) survived cyfluthrin exposure. The Maine and cricket colony strains were tolerant of tetrachlorvinphos exposure as both larvae and adults, with 55-74% mortality, whereas nearly 100% mortality was observed with New York strains. The cricket colony adult beetles were highly susceptible to cyfluthrin, with 100% mortality following exposure, but larvae were considerably less susceptible (87.7%). Pesticide use histories for the poultry farms and their impact on the results are discussed.CONCLUSION: The results document that tetrachlorvinphos, an active ingredient with a long use history, may be losing its effectiveness against lesser mealworms in some poultry operations; however, it is still effective in many others.     

Practical cytology for inflammatory skin diseases

Cytology is the most common and immediately informative diagnostic tool in the practice of dermatology. It is simple to perform and requires equipment usually already present in most practices such as a microscope and slides, cotton-tipped applicators and stains. Cytology interpretation is also easily self taught. With little practice the practitioner can easily become familiar with sample interpretation from inflammatory lesions; including recognition of bacteria, yeast, dermatophyte spores and hyphae, deeper fungal elements and parasites. Additionally, the practitioner should become familiar with the variety of inflammatory cells seen with these conditions, as well as keratinocyte morphology. This article provides an overview and the initial steps on how to become a more proficient cytologist in practice.     

Management, productivity and livelihood effects on Kenyan smallholder dairy farms from interventions addressing animal health and nutrition and milk quality

We aimed to describe the management and productivity of this group of smallholder dairy farmers in Kenya at the beginning of an intervention program and to document relevant observed changes in the 3rd year of the intervention. A 3-year intervention program, focused on management of animal health and nutrition, and milk quality, was implemented by one Kenyan and two Canadian non-governmental organizations (one university based) to help improve the milk production and livelihoods of Kenyan smallholder dairy farmers (primarily women). Thirty farmers were enrolled and completed questionnaires at the start and end of the project. Focus groups were also conducted to obtain qualitative information on livelihood effects from the program. In 2004, 70% of the eligible youngstock (more than 15 months of age) were pregnant, and cows had a long average days-in-milk of 240 days. External parasites, poor hygiene, and long claws were not uncommon among cows, and 37% and 20% of the farms reported clinical intestinal parasitism and diarrhea in youngstock. In 2006, there were significant improvements in the proportion of farms planting high-protein forages, farms using better milking procedures, and on-farm milk storage methods. The reported mastitis incidence rate fell from 0.55 to 0.20 cases/cow-year (p < 0.01), and the average number of cows and youngstock significantly increased from 1.5 and 0.9 to 2.9 and 2.6, respectively. There were reported improvements in the livelihoods among the member families. The partnership-based intervention program significantly improved management and productivity of this group of smallholder dairy farmers in rural Kenya, leading to reported livelihood benefits.     

Genetic diversity and differentiation of yellowwood [<Emphasis Type="Italic">Cladrastis kentukea</Emphasis> (Dum.Cours.) Rudd] growing in the wild and in planted populations outside the natural range

Yellowwood (Cladrastis kentukea) grows in small, widely scattered populations in the wild, but is also a popular ornamental tree that thrives when planted in urban areas outside its natural range. Since the small native populations of yellowwood in several states are considered at risk of extirpation, the cultivated population could serve as an ex situ repository of yellowwood genetic diversity that could be used to restore lost local populations of the species. The potential value of cultivated yellowwood for conservation depends on the genetic diversity among cultivated trees compared to natural populations. Using nuclear microsatellite markers, we genotyped 180 yellowwoods from natural populations in Indiana, Missouri, Arkansas, and Kentucky, along with 61 trees from urban parks and landscapes in Indiana, Ohio, and Missouri. We found that, even when statistics were adjusted based on population size, the urban “population” had higher genetic diversity than any of the wild populations sampled, indicating that commercially-grown yellowwood is most likely a mixture of genotypes from isolated wild populations. We observed strong genetic differentiation among wild populations, and evidence for inbreeding in at least one of the wild populations.