Prion protein genotypes of sheep as determined from 3343 samples submitted from Ontario and other provinces of Canada from 2005 to 2012

This study analyzed sheep prion protein (PrP) genotypes of samples submitted from Ontario and other provinces of Canada to the Animal Health Laboratory at the University of Guelph, Guelph, Ontario, between 2005 and 2012. In Ontario, the proportion of scrapie-resistant sheep increased from 2005 to 2012 as evidenced by an increase in the ARR haplotype. When Canadian provinces (Alberta, Ontario, Quebec, and Nova Scotia) were compared from 2008 to 2012, a high proportion of scrapie-resistant sheep was found in all the provinces. The proportions of resistant sheep were lower in Alberta and Quebec than in Ontario and Nova Scotia. Alberta had higher proportions of susceptible sheep and a higher frequency of VRQ alleles, and Quebec had a higher frequency of the ARQ allele.     

A B-cell targeting virus disrupts potentially protective genomic methylation patterns in lymphoid tissue by increasing global 5-hydroxymethylcytosine levels

The mechanisms by which viruses modulate the immune system include changes in host genomic methylation. 5-hydroxymethylcytosine (5hmC) is the catalytic product of the Tet (Ten-11 translocation) family of enzymes and may serve as an intermediate of DNA demethylation. Recent reports suggest that 5hmC may confer consequences on cellular events including the pathogenesis of disease; in order to explore this possibility further we investigated both 5-methylcytosine (5mC) and 5hmC levels in healthy and diseased chicken bursas of Fabricius. We discovered that embryonic B-cells have high 5mC content while 5hmC decreases during bursa development. We propose that a high 5mC level protects from the mutagenic activity of the B-cell antibody diversifying enzyme activation induced deaminase (AID). In support of this view, AID mRNA increases significantly within the developing bursa from embryonic to post hatch stages while mRNAs that encode Tet family members 1 and 2 reduce over the same period. Moreover, our data revealed that infectious bursal disease virus (IBDV) disrupts this genomic methylation pattern causing a global increase in 5hmC levels in a mechanism that may involve increased Tet 1 and 2 mRNAs. To our knowledge this is the first time that a viral infection has been observed to cause global increases in genomic 5hmC within infected host tissues, underlining a mechanism that may involve the induction of B-cell genomic instability and cell death to facilitate viral egress.     

Fishing gear effects and ecology of the sea whip (Halipteris willemoesi (Cnidaria: Octocorallia: Pennatulacea)) in British Columbia,Canada: preliminary observations

• 1. We conducted a preliminary study of the effects of a shrimp beam trawl and prawn traps on sea whips (Halipteris willemoesi (Cnidaria: Octocorallia: Pennatulacea)) at two bays on Clio Channel, south central coast of British Columbia, Canada. Video and grabs surveys were conducted to estimate abundance and make observations on sea whips and their habitat.
• 2. No adult sea whips were caught in six beam trawls. In 600 prawn (Pandalus platyceros) trap sets at Turnour Bay, 30 sea whips were found entangled in the gear and of these 50% of the colonies were damaged. The length of broken sea whips ranged from 0.09 to 1.03 m. At Turnour Bay, the density of adults observed in video surveys ranged from 7.1 to 14.3 m^?2. Juvenile density in grab samples ranged from 53 to 123 m^?2 and a few adults were also caught. The lengths of intact adult sea whips caught in traps and grabs ranged from 0.20 to 1.98 m and juveniles from 0.3 to 0.7 cm.
• 3. Fewer adult sea whips (<0.1 m^?2) were seen in Bones Bay, where sediments were muddier (grain size <0.25 mm: 84.6 to 97.2%) relative to Turnour Bay (grain size <0.25 mm: 71.4 to 85.9%). Bottom water characteristics at the two bays were similar. Seasonal temperature range was 7.5–8.4°C, salinity 30.63–31.49 psu, and dissolved oxygen 2.76–5.97 mg L^?1. Differences in sediment characteristics and food availability may have been a factor influencing differences in abundance of sea whips between the two bays.
• 4. Further data are needed to investigate the effects of trawling and trapping on sea whips, as sample sizes were small in the present study and only two gear types were evaluated. Studies of effects of otter trawling and heavier traps, such as those used for Dungeness crab (Cancer magister), are warranted.

Copyright © 2005 John Wiley & Sons, Ltd.     

Oxidation of glutathione during hydroperoxide metabolism in isolated hepatocytes of rainbow trout (Salmo gairdneri)

Freshly isolated rainbow trout hepatocytes were exposed to tert-butyl hydroperoxide (BuOOH), a substrate for glutathione peroxidase. BuOOH at a concentration approximately equimolar (1 mM) with intracellular reduced glutathione (GSH) caused a reversible increase in intracellular glutathione disulphide (GSSG) but did not compromise cell viability or damage membrane lipids. BuOOH at 10 mM caused a large irreversible increase in intracellular GSSG followed by efflux into the medium. Considerable leakage of lactate dehydrogenase and loss of highly unsaturated fatty acids, particularly docosahexaenoic acid also occurred. Dependence of hydroperoxide removal on flux through the hexose monophosphate pathway was suggested by the increased release of ¹⁴CO₂ from [1-¹⁴C] glucose from hepatocytes incubated with BuOOH.     

The Value of Seed Potatoes from Four Systems in Kenya

Although potatoes are the second most valuable crop in Kenya, poor seed potato quality has limited industry expansion. The objectives of this study were to describe the seed potato system, identify problems, determine use of high-quality seed and estimate farmer willingness to pay (WTP) for different types of seed. Data was collected from interviews, forums and surveys. A contingent valuation method (CVM) model was also developed to analyze the factors that influence farmer WTP. It was found that the seed system consists of three sub-components: Formal, Semi-Formal and Farmer. More than 96 % of Kenya seed potatoes were produced in the Farmer category, and were considered to be poor quality. Growers identified bacterial wilt, viral diseases and late blight as the most serious problems. The WTP model revealed that farmer age, distance to seed source, potato training, gender and region were statistically significant explanatory variables. The study recommends that training be conducted to increase production of “clean seed” and “positively-selected seed” in the Semi-Formal part of the seed system.     

Global and Phylogenetic Distribution of Quorum Sensing Signals,Acyl Homoserine Lactones,in the Family of Vibrionaceae

Bacterial quorum sensing (QS) and the corresponding signals, acyl homoserine lactones (AHLs), were first described for a luminescent Vibrio species. Since then, detailed knowledge has been gained on the functional level of QS; however, the abundance of AHLs in the family of Vibrionaceae in the environment has remained unclear. Three hundred and one Vibrionaceae strains were collected on a global research cruise and the prevalence and profile of AHL signals in this global collection were determined. AHLs were detected in 32 of the 301 strains using Agrobacterium tumefaciens and Chromobacterium violaceum reporter strains. Ethyl acetate extracts of the cultures were analysed by ultra-high performance liquid chromatography-high resolution mass spectrometry (MS) with automated tandem MS confirmation for AHLs. N-(3-hydroxy-hexanoyl) (OH-C6) and N-(3-hydroxy-decanoyl) (OH-C10) homoserine lactones were the most common AHLs found in 17 and 12 strains, respectively. Several strains produced a diversity of different AHLs, including N-heptanoyl (C7) HL. AHL-producing Vibrionaceae were found in polar, temperate and tropical waters. The AHL profiles correlated with strain phylogeny based on gene sequence homology, however not with geographical location. In conclusion, a wide range of AHL signals are produced by a number of clades in the Vibrionaceae family and these results will allow future investigations of inter- and intra-species interactions within this cosmopolitan family of marine bacteria.