A Note on Determining Parameter Redundancy in Age-Dependent Tag Return Models for Estimating Fishing Mortality,Natural Mortality and Selectivity

Jiang et al. (JABES 12:177–194, 2007) present models for tag return data on fish. They examine whether the models are parameter redundant, but need to resort to numerical methods as symbolic methods were sometimes found to be intractable. Also, their results are only applicable for a specified number of years of tagging data and age-classes. Here we show how symbolic methods can in fact be used and also how conclusions apply to any number of years of tagging data and age-classes.     

Spatial analysis reveals differences in soil microbial community interactions between adjacent coniferous forest and clearcut ecosystems

Knowledge of how forest management influences soil microbial community interactions is necessary for complete understanding of forest ecology. In this study, soil microbial communities, vegetation characteristics and soil physical and chemical properties were examined across a rectangular 4.57 × 36.58 m sample grid spanning adjacent coniferous forest and clearcut areas. Based on analysis of soil extracted phospholipid fatty acids, total microbial biomass, fungi and Gram-negative bacteria were found to be significantly reduced in soil of the clearcut area relative to the forest. Concurrent with changes in microbial communities, soil macroaggregate stability was reduced in the clearcut area, while no significant differences in soil pH and organic matter content were found. Variography indicated that the range at which spatial autocorrelation between samples was evident (patch size) was greater for all microbial groups analyzed in the clearcut area. Overall, less spatial structure could be resolved in the forest. Variance decomposition using principal coordinates of neighbor matrices spatial variables indicated that soil aggregate stability and vegetation characteristics accounted for significant microbial community spatial variation in analyses that included the entire plot. When clearcut and forest areas were analyzed separately, different environmental variables (pH in the forest area and soil organic matter in the clearcut) were found to account for variation in soil microbial communities, but little of this variation could be ascribed to spatial interactions. Most microbial variation explained by different components of microbial communities occurred at spatial scales other than those analyzed. Fungi accounted for over 50% of the variation in bacteria of the forest area but less than 11% in the clearcut. Conversely, AMF accounted for significant variation in clearcut area, but not forest, bacteria. These results indicate broadly disparate controls on soil microbial community composition in the two systems. We present multiple lines of evidence pointing toward shifts in fungi functional groups as a salient mechanism responsible for qualitative, quantitative and spatial distribution differences in soil microbial communities.     

Effects of twenty percent corn wet distillers grains plus solubles in steam-flaked and dry-rolled corn-based finishing diets on heifer performance, carcass characteristics, and manure characteristics

Two hundred sixty-four crossbred heifers (initial BW = 354 kg ± 0.5) were used to determine effects of corn processing method and wet distillers grains plus solubles (WDGS) inclusion in finishing diets on animal performance, carcass characteristics, and manure characteristics. The study was conducted as a randomized complete block with a 2 × 2 factorial arrangement of treatments. Dietary treatments included steam-flaked corn (SFC)- and dry-rolled corn (DRC)-based finishing diets containing 0 or 20% WDGS (0SFC, 20SFC, 0DRC, and 20DRC, respectively). Heifers averaged 154 d on feed and were marketed in 3 groups. There were no interactions between corn processing method and WDGS detected (P ≥ 0.29) for any performance or carcass response variables. Heifers fed diets containing WDGS tended to have greater final BW (P = 0.10) and increased G:F (P = 0.08) compared with heifers fed diets without WDGS. Heifers fed SFC-based diets consumed 7% less feed (P < 0.01) and were 9% more efficient (P < 0.01) than heifers fed DRC-based diets. Carcass characteristics were not affected by corn processing method or WDGS inclusion (P ≥ 0.16). Intakes of OM, N, P, and K were greater (P ≤ 0.05) for heifers fed DRC-based diets than those fed SFC-based diets, which resulted in greater net accumulation of the nutrients in the manure (P ≤ 0.04). Heifers fed diets containing WDGS had greater (P < 0.01) intakes of N, P, and K than heifers fed diets without WDGS. As a result, a greater net accumulation of P and K (P ≤ 0.03) and N (P = 0.10) were present in the manure from cattle fed diets containing WDGS compared with those fed diets without WDGS. There was no interaction (P ≥ 0.16) between corn processing and WDGS on N volatilization losses. Nitrogen volatilization losses from manure (expressed as a percentage of intake and g·heifer(-1)·d(-1)) were greater (P < 0.01) for heifers fed SFC-based diets than heifers fed DRC-based diets. Feeding DRC-based finishing diets to heifers resulted in increased manure production and nutrient excretion and decreased N volatilization. Both corn processing method and WDGS inclusion affected animal performance and manure characteristics.     

Owner-reported equine health disorders: results of an Australia-wide postal survey

OBJECTIVE: To establish the prevalence of health disorders reported by horse owners registered with veterinary practices in Australia. DESIGN AND METHOD: Mailed questionnaire-based study of horse owners in Australia conducted in 2001. RESULTS: Data were obtained for 3901 horses belonging to 621 owners. The most prevalent health disorders were non-laminitic lameness (13.0%), skin disorders (6.1%) and behavioural disorders (4.5%). Prevalence of health disorders varied among different age, breed and sex categories within the study population, and disorders were more prevalent in male and older horses. CONCLUSION: The most frequent disorders reported by owners were lameness, skin disorders and behavioural disorders. The disease profile was similar to that described in other owner reported studies conducted in the UK and USA.     

Quantitation of house dust mites and house dust mite allergens in the microenvironment of dogs

OBJECTIVE: To quantitate the density of Dermatophagoides farinae and D pteronyssinus and concentrations of house dust mite (HDM) allergens (Der f 1, Der p 1, and Group 2 allergens) in the indoor microenvironment of dogs. Sample Population-50 homes in Columbus, Ohio. PROCEDURES: n each home, samples of dust were collected from 3 locations in which dogs spent most time. Whenever possible, the species of mites collected was identified. Mite density (mites/g of dust) was assessed, and allergen concentrations were assayed by standardized ELISAs. Relative humidity and temperature in each home were monitored during a 5-day period. Characteristics of homes and sample sources were evaluated. RESULTS: Dust samples from all 50 homes contained > or = 1 HDM allergen; Der f 1 and Der p 1 were detected in 100 and 74% of homes, respectively. Fifteen homes had HDMs; compared with D pteronyssinus, D farinae was found more commonly (14/15 homes) and at a higher density. Basements, homes without central air-conditioning, and dog beds that were > or = 1 year old had high HDM allergen concentrations. Homes with > or = 2 microg of Der f 1 or Group 2 allergens/g of dust or > or = 100 mites/g of dust were significantly more likely to have a maximum relative humidity > or = 75%. CONCLUSIONS AND CLINICAL RELEVANCE: Results indicate the presence of HDMs and HDM allergens in the specific microenvironment of dogs in homes. Factors associated with high levels of exposure were identified, which may be associated with increased risk for sensitization and development of atopic diseases.     

Behavioral training and hydraulic chute restraint enables handling of eland antelope (Taurotragus oryx) without general anesthesia.

Difficulties and risks associated with restraining large nondomestic ungulates are limiting factors toward developing and applying assisted reproductive technologies, such as artificial insemination and embryo transfer. In this study on 10 female eland (Taurotragus oryx), we evaluated the use of behavioral training and handling handling in a hydraulic chute to perform transvaginal ultrasound-guided oocyte retrieval and other clinical procedures. Nine females were conditioned to associate specific sound cues with food treats. The interval from the audio cue until acceptance of handheld treats varied among females (1.8-58.3 min). Animals also differed in their response to training for voluntary entry into the chute. Handling eland for oocyte retrieval in the hydraulic chute required xylazine sedation. During sedation and handling, eland undergoing oocyte retrieval procedures had higher blood glucose levels (14.4 +/- 3.1) than females handled similarly but without oocyte retrieval (9.3 +/- 2.7 mmol/L). Plasma osmotic pressure, hematocrit, and creatine phosphokinase activity were similar between these two groups. Females that were more difficult to train had higher blood glucose levels than the more cooperative animals. Cooperative females had fewer vertical stripes on their sides. More than 40 procedures were conducted without complications or mortality. The combination of behavioral conditioning-training and restraint of sedated eland in a hydraulic chute was a reliable and repeatable method for performing minimally invasive assisted reproductive techniques.     

Endoscopy via a gastric cannula to monitor the development of ulcers in the pars esophagea in pigs after consumption of a finely ground feed combined with a period of withholding of feed

OBJECTIVE: To develop an endoscopic technique for use in monitoring devlopment of gastric ulcers via a gastric cannula during withholding of feed and administration of a finely ground diet to pigs. ANIMALS: 6 pigs weighing between 60 and 70 kg. PROCEDURE: A gastric cannula was surgically inserted adjacent to the pars esophagea in each pig. Pigs were fed a finely ground diet for two 7-day periods that were separated by a 48-hour period during which feed was withheld. Endoscopic examination via the gastric cannula was used to monitor development of ulcers in the pars esophageal region of the pigs during the 48-hour period of feed withhold and subsequent 7-day feeding period. An ulcer score was assigned during each endoscopic examination. A final examination was performed during necropsy and compared with results for the final endoscopic examination. RESULTS: Consumption of a finely ground diet for 7 days resulted in progressive erosive damage to the pars esophageal region of the stomach. Further significant increases in ulcerative damage were detected after 24 and 48 hours of withholding of feed. Final examination during necropsy did not reveal significant differences from results obtained during the final endoscopic examination. CONCLUSIONS AND CLINICAL RELEVANCE: Endoscopic examination via a gastric cannula was an effective means of monitoring ulcer development in the pars esophagea of pigs. Feeding a finely ground diet and withholding of feed induced endoscopically observable ulcers in the stratified squamous epithelial region of the stomach. Direct visual examination during necropsy confirmed the accuracy of endoscopic examination.