The effects of environmental enrichment and transport stress on the weights of lymphoid organs,cell‐mediated immune response,heterophil functions and antibody production in laying hens

The effects of environmental enrichment and transport stress on the immune system were investigated in laying hens. A total of 48 1‐day‐old chickens were used, half of the chickens were reared in conventional cages (RCC) and the rest in enriched cages (REC). Transport stress was applied in the 17th week. Liver weight decreased, spleen and bursa of Fabricius weights, white blood cell count, CD4+ and CD8+ cell proportions increased due to the transport. Environmental enrichment significantly increased antibody production and tended to increase monocyte percentage and CD8+ cell proportion. The effect of transport on, heterophil (H) and lymphocyte (L) percentages was not significant in RCC chickens. While heterophil percentage and H:L ratio increased, lymphocyte percentage decreased in REC chickens subjected to transport. Transport stress increased heterophil functions both in REC and RCC chickens, but the increase was higher in REC hens than in RCC hens. In conclusion, although environmental enrichment did not neutralize the effect of transport on lymphoid organs, it activated the non‐specific immune system, cellular and the humoral branches of the specific immune system by increasing heterophil functions, CD8+ cells and antibody production, respectively. Therefore, environmental enrichment suggested for improving animal welfare may also be beneficial to improve the immune system of birds exposed to stress.     

Simrank: Rapid and sensitive general-purpose k-mer search tool

Background  

Terabyte-scale collections of string-encoded data are expected from consortia efforts such as the Human Microbiome Project . Intra- and inter-project data similarity searches are enabled by rapid k-mer matching strategies. Software applications for sequence database partitioning, guide tree estimation, molecular classification and alignment acceleration have benefited from embedded k-mer searches as sub-routines. However, a rapid, general-purpose, open-source, flexible, stand-alone k-mer tool has not been available.     

Histological and histochemical characterization of the mucosa of the digestive tract in flower fish (Pseudophoxinus antalyae)

The wall of the digestive tract is composed of the tunica mucosa, tunica muscularis and tunica serosa. Lamina-submucosa separation or any glands were not observed in tunica mucosa. Goblet cells were determined to constitute a much larger reserve at digestive tract mucosa. Histochemical analysis of the intestine of flower fish (Pseudophoxinus antalyae) showed that gastrointestinal mucous content included sulphate-esters and/or carboxylic [Alcian blue (AB) 0.06+], glycogene and/or oxidable dioles [periodic acid/Schiff+ (PAS+)], neutral or acid-rich (PAS/AB pH 2.5+), sialic acid residues (KOH/PAS) and strong acid sulphated [Aldehyde fuchsin+ (AF+)] glycoproteins (GPs). Except these mucosubstances to lower densities, densely sulphate (AB pH 2.5+), O-sulphate esters (AB pH 1+) strong and weak sulphated (AB 0.3 M+), GPs were also determined.     

Determination of the relationship between serum anti‐Müllerian hormone level and superovulatory response in Simmental cows

The most significant focal points of the embryo transfer technology are as follows: the selection of donors, the response of the selected donor to the superovulation protocol and the obtained number of the transferable embryos. For this purpose, it is suggested that donor selection can be done by anti‐Müllerian hormone (AMH) levels, and embryo production is evaluated. AMH is secreted by the granulosa cells of primordial, pre‐antral and antral follicles below 4 mm in the ovary, independent of FSH. Therefore, the aim of this study was to investigate the relationship between serum AMH levels and the number of corpus luteum (CL), total embryos and transferable embryos that were shaped after a uniform superovulation protocol. For this reason, 48 Simmental cows, which were located at General Directory of Agricultural Enterprises (region, province, etc. instead of the general directorate), were used as donors for the embryo transfer. Blood samples were taken at random, regardless of the stage of animal's sexual cycle. AMH levels were measured by enzyme‐linked fluorescent assay (ELFA) method of the miniVIDAS^® (bioMérieux SA) using AMH Bovine Test Kit. According to the statistical analyses of the obtained data, AMH levels were positively correlated with CL and total embryos (p < .05). No significant correlations between AMH and transferable embryos were approved (p > .05). It was also determined that each 200 pg/ml increase in serum AMH level resulted in one increase in CL number. Overall, considering the positive correlation between AMH level and the obtained number of CL and total embryos after a superovulation treatment, it was concluded that measuring blood AMH level prior to any further costly implementation may be an effective method in donor selection.     

Effect of breed on fattening performance, slaughter and meat quality characteristics of Awassi and Morkaraman lambs

The influence of breed on fattening performance, slaughter and meat quality traits was studied in Awassi and Morkaraman male lambs at approximately 8 months of age. All of the groups were fed a diet consisting of concentrate mixture offered ad libitum, and 300 g of grass hay per lamb per day during 60-day fattening period. Initial live weight, final live weight, daily weight gain and feed conversion efficiency (concentrate and hay consumption for 1 kg of live weight gain) were 39.63 kg, 55.08 kg, 0.258 kg and 6.37 for Awassi; 40.54 kg, 55.58 kg, 0.234 kg and 6.77 for Morkaraman, respectively. The effect of breed on fattening performance and slaughter traits except for LD area was not significant. In addition, meat colour parameters (L = lightness, a = redness, b = yellowness, H = hue angle and C = chroma), pH values, drip loss and sensory attributes were not affected by breed in present study. A significant muscle effect was observed for instrumental measurements of some meat quality characteristics as meat colour parameters (L, a and C), collagen, drip loss, pH, moisture and protein content, WBS, and for some sensory attributes (tenderness, juiciness, acceptability and number of chewing). Results of this study indicate that fattening performance, slaughter and meat quality traits were similar between Awassi and Morkaraman male lambs.     

Phenolic Compounds,Antioxidant Activity,Fatty Acids and Volatile Profiles of 18 Different Walnut (Juglans regia L.) Cultivars and Genotypes

The study was carried out to determine phenolic compounds, antioxidant activity, total lipids, saturated fatty acids, unsaturated fatty acids, and volatile organic compounds (VOCs) of 18 different walnut (Juglans regia L.) cultivars and genotypes grown in Usak province, Turkey. The biochemical compounds were identified for each cultivar and genotype and a comparative evaluation was carried out. The results showed that most of the biochemical compounds are significantly varying among each other (p?<?0.05). The existence and abundance of the biochemical compounds in the cultivars and genotypes have not only found to be a cause of differentiation, but they have been important parameters for the similarities among the cultivars and genotypes. Total phenolic content and antioxidant activity ranged from 750.67 to 1245.64?mg GAE ml^?1 and from 42.46 to 56.50% in kernels, respectively. The highest contents of the phenolic compounds were noted from gallic acid (11991?mg kg^?1), ellagic acid (1057.16?mg kg^?1), catechin (425.4?mg kg^?1), and rutin (216.6?mg kg^?1), as an average of all cultivars and genotypes. The highest lipid contents were noted from ‘Franquette’ and ‘Fernette’ as 64.28% and 63.26%, respectively, while the lowest content was noted from ‘Oguzlar 77’ (52.52%). A total of 42 VOCs were described from the 18 different walnut cultivars and genotypes. Overall, results showed that the phenolic profiles, fatty acids composition, and VOCs play an important role in similarities and diversities among the cultivars. According to the results, 7 different clusters were developed from the 18 cultivars and genotypes. Herein, ‘Fernor’, ‘Maras 18’, ‘Arslan Local Type’ and ‘Cisco’ cultivars were found to have the lowest biochemical compositions. The superior cultivars or genotypes, in terms of the abundance of the biochemical composition, were found to be ‘Gulizar Hanim Type’, ‘Lara’, ‘Pedro’, ‘Tulane’, ‘Fernette’, ‘Balkan’ and ‘Franquetta’, where they were found to develop 3 clusters by 1:3:3, respectively.

     

The distribution of external taste buds in flower fish (Pseudophoxinus antalyae)

Purpose of this study was to determine the distribution of external taste buds of flower fish (Pseudophoxinus antalyae) on different body locations (lip, lateral, ventral and dorsal areas, dorsal-pelvic-pectoral-anal fins). In this species, it was found that the density of taste buds was greater on lip epithelium than that of lateral (between pectoral-anal, anal-caudal fins), ventral (between pelvic and anal fins) and dorsal (close to the head) locations. It was observed that the shape of taste bud changed depending upon the epithelium thickness and it was found that some of these structures protruded towards to the exterior of epithelium.     

Effect of injecting with dexamethasone and progestagen-PMSG on reproduction and rearing of lambs in semi-intensive conditions

The aim of the present study was to evaluate the effect of different doses dexamethasone and progestagen-PMSG on fertility and prolificacy in Kivircik ewes during the breeding season. For the experiment, 100 ewes were divided into four groups, with 25 females in each group. Groups were fluorgestone acetate (FGA, 30 mg), administered via intravaginal sponges. Experimental groups 2, 3 and 4 mL dexamethasone injection were given 72 h before mating season. The fertility rates control, 2, 3 and 4 mL were 88.0, 92.0, 100.0 and 100.0%, respectively (p<0.05). The prolificacy rates for the same groups were 122.7, 130.4, 144.0 and 156.0%, respectively (p<0.01). The injections dexamethasone significantly increased lamb birth weight and daily weight gain for 60 days (p<0.05).     

Using empirical equations to determine appropriate furrow length under field condition

In this study, some of the empirical methods such as USDA-SCS and volume balance equations were used for determining furrow length. The main purpose was proving empirical equations application possibility. According to results, USDA-SCS and Volume Balance Equations can be used for determining furrow length at the Bafra Plain, Turkey. The field experiment and Volume Balance results are very close to each other. Experimental results are different from USDA-SCS equation results, but there is a relationship between both. There is a coefficient between field results and USDA-SCS equation result for furrow length. The coefficient (0.41) can multiply by UDSA-SCS result is 73 m which is very close to the field experimental result of 71 m.