Coffee biotechnology and its application in genetic transformation

The most important advances obtained on in vitro coffee regeneration systems and in coffee genetic transformation, drawing perspectives and scopes to further studies in these fields are presented and discussed. This revised version was published online in July 2006 with corrections to the Cover Date.     

Brazil nut conservation through shifting cultivation

The regeneration of Brazil nut trees depends on tree-fall gaps in the forest. However, shifting cultivation fallows also create comparable biotic and abiotic opportunities for the dispersion and establishment of this gap-loving species. At the same time, the ability of Brazil nut trees to resprout enables fallow individuals to survive successive slash-and-burn cycles. Recognizing the importance of shifting cultivation for the food security of forest dwellers, we investigated whether the high level of Brazil nut regeneration found in cultivation fallows could be explained by the resprouting capability of Brazil nut trees, the number of cultivation cycles, past agricultural use and distance to the nearest conspecific productive adults. We found that the Brazil nut tree population density increased from 8.86 trees ha⁻¹ to 13.69 trees ha⁻¹ and 27.09 trees ha⁻¹ at sites after one, two and three or more shifting cultivation cycles, respectively. As a consequence of resprouting, after a certain number of shifting cultivation cycles, the fallows become dominated by Brazil nut trees, and the landholders may decide to preserve them and to exclude enriched sites from future agricultural use. Protected for their extractive value, the secondary forests spontaneously enriched with Brazil nut trees are allowed to develop into nut-producing forests that have reduced chances of conversion into crops or pastures, thus reversing the classical process of Amazon forest degradation.     

Molecular and pedigree analysis applied to conservation of animal genetic resources: the case of Brazilian Somali hair sheep

The first registers of Somali sheep in Brazil are from the beginning of the 1900s. This breed, adapted to the dry climate and scarce food supply, is restricted in the northeast region of the country. Molecular marker technologies, especially those based on genotyping microsatellite and mtDNA loci, can be used in conjunction with breeding (pedigree analysis) and consequently the maintenance of genetic variation in herds. Animals from the Brazilian Somali Conservation Nuclei from Embrapa Sheep and Goats in Ceará State were used to validate genetic monitoring by traditional pedigree methods and molecular markers. Nineteen microsatellite markers and 404 base pairs from the control region of mtDNA were used. For total herd diversity, an average 5.32 alleles were found, with expected heterozygosity of 0.5896, observed heterozygosity of 0.6451, 0.4126 for molecular coancestrality, and coefficient of inbreeding (F _IS) was −0.095. Comparing molecular coancestrality means over the years, there was a consistent increase in this parameter within the herd, increasing from 0.4157 to 0.4769 in 2 years (approx. 12% variation). Sixteen mtDNA haplotypes were identified. Inbreeding and other estimates from genealogical analyses confirm the results from molecular markers. From these results, it is possible to state that microsatellites are useful tools in genetic management of herds, especially when routine herd recording is not carried out, or there were gaps in recent generations. As well as pedigree control, genetic diversity can be optimized. Based on the results, and despite herd recording in the herd of Brazilian Somali of Embrapa Sheep and Goats, additional management measures need to be carried out in this herd to reduce inbreeding and optimize genetic variation.     

Serum and Tissue Steroid Hormone Levels in Canine Mammary Tumours: Clinical and Prognostic Implications

Hormonal dependency of canine mammary tumours (CMT) has been studied over the last few decades. However, studies assessing the prognostic and predictive potential of serum and/or tissue steroid hormone levels are still scarce in CMT. To the best of our knowledge, this is the first report relating serum and tissue levels of steroid hormones and prognosis in dogs. Serum and tumour tissue from 45 female dogs with spontaneous CMT were included in the study. Moreover, serum and normal mammary tissue from 13 healthy female dogs were also included as controls. Steroid hormones were determined by competitive enzyme immunoassay. Overall, levels of steroid hormones in serum and tissue homogenates were significantly different between malignant and benign mammary tumours (p < 0.01), except for progesterone (P4) serum levels that revealed no statistical differences between groups. In malignant tumours, oestrone sulphate (SO4E1), dehydroepiandrosterone (DHEA), androstenedione (A4), testosterone (T) and P4 elevated tissue concentrations were significantly associated with tumour relapse and/or distant metastasis during follow‐up. A significant association was found between elevated tissue SO4E1 (p = 0.003), 17β‐oestradiol (E2) (p = 0.036), DHEA (p = 0.022), A4 (p = 0.001) and P4 (p = 0.013) concentrations and shorter disease‐free survival and overall survival in female dogs with malignant mammary tumours. The high levels of tissue steroids found in cases of poor prognosis open the possibility of additional new therapeutic approaches. Future clinical trials will be needed to clarify the usefulness of targeting steroid hormones in the treatment of this neoplastic disease.     

Genetic diversity and population structure in Jatropha (Jatropha curcas L.) based on molecular markers

Genetic Resources and Crop Evolution - Jatropha (Jatropha curcas L.) is an oleaginous potential, howetever, some studies report that there is low genetic diversity in Brazilian genotypes....     

Orchid bees respond to landscape composition differently depending on the multiscale approach

Landscape Ecology - Multiscale approaches are essential for understanding ecological processes and detecting the scale of effect. However, nested multiscale approaches retain the effect of the...     

Genetic diversity of Meloidogyne spp. from rice and identification of multiresistant sources in Oryza spp. accessions

Recently a Meloidogyne species complex was detected parasitizing and causing damage to irrigated rice in southern Brazil, highlighting the need to study the genetic diversity of these species and their pathogenicity to Oryza spp. in order to select genotypes of rice with multiple resistance. This study compared the genetic diversity of Brazilian Meloidogyne spp. isolates from irrigated rice and evaluated the reaction of four wild accessions of Oryza species (O. glumaepatula, O. longistaminata, O. grandiglumis, and O. alta) and two cultivated species, O. glaberrima and O. sativa (control) to M. ottersoni, M. oryzae, and two variants of M. graminicola (Est G2 and Est G3). Genetic variability was assessed using RAPD and AFLP markers. M. graminicola and M. ottersoni showed high intraspecific variability: 83.76% and 41.14%, respectively. Cluster analysis showed a clear separation among rice root-knot nematodes (RKNs) into subclades according to their esterase phenotypes with 100% bootstrap. For rice resistance screening, plants were inoculated with 5,000 eggs, and the nematode reproduction factor evaluated 90–120 days postinoculation. O. glumaepatula, an American wild species, was highly resistant or resistant to all rice RKNs tested and is a valuable source of multiple resistance. Overall, the other rice species also showed different levels of resistance. Conversely, O. longistaminata exhibited low levels of resistance. M. graminicola Est G3 was the most aggressive isolate. Sources of resistance against RKN in wild Oryza genotypes, especially in an AA genome like O. glumaepatula, may be of great interest for future breeding programmes in cultivated rice.     

Meningoencephalomyelitis in a foal due to Salmonella agona infection

CASE HISTORY: A neonatal Thoroughbred foal was presented with rib fractures and left forelimb lameness secondary to dystocia.

CLINICAL FINDINGS: The foal developed a head tilt, seizures and watery diarrhoea during hospitalisation and died at 7 days of age. Histological examination of the brain and spinal cord revealed a suppurative meningoencephalomyelitis with vasculitis, and numerous intralesional, gram-negative bacilli. Similar microscopic lesions were noted in the lungs, renal medullary interstitium, and umbilicus. Bacilli in the brain, spinal cord and umbilicus were identified immunohistochemically as Salmonella group B. Salmonella agona was isolated in pure culture from the brain, lung, liver, kidney, and intestine.

CONCLUSION: This is the first report of meningoencephalomyelitis and septicaemia due to Salmonella infection in an equine neonate.