Assessing forest structure and function from spectral transmittance measurements: a case study in a Mediterranean holm oak forest

Annual changes in structural attributes and seasonal dynamics in water content, photosynthetic rate and light-use efficiency (LUE) were assessed by spectral transmittance for 4 years (1999-2003) in six stands of a Mediterranean holm oak forest. Green biomass, total biomass and leaf area index (LAI) were determined. In 1999, seasonal dynamics of net carbon dioxide (CO2) exchange and water content were measured. We recorded photosynthetically active radiation (PAR) transmittance and hyperspectral transmittance in the 400-1100 nm region and derived reflectance-based vegetation indices. Transmittance over the PAR region derived from either ceptometer or spectroradiometer measurements (PART and TPAR, respectively) was related to green and total biomass. Both PART and TPAR were also related to LAI (r=0.79 and r=0.70, respectively, P <0.001) and were appropriate for comparison among stands, whereas subtle changes in LAI within a stand were better assessed by the transmittance amplitude in the red edge region (TRE) (within a stand, r=0.77-0.99, P <0.001). Spectral transmittance-based indices successfully captured physiological processes that occurred on temporal (seasonal) and spatial scales. The transmittance-based water index (TWI) was related to both foliage and canopy water content (r=0.69, P <0.001). Estimates of foliage and canopy water content improved in dense (closed) stands (r=0.84 and r=0.87, respectively, P <0.001) compared with low-density stands. Under non-drought conditions, transmittance-based photochemical reflectance index (TPRI) was related to LUE (r=0.58, P <0.05) and net CO2 exchange (r=0.72, P <0.01), and the combined TPAR x TPRI index greatly improved these relationships (r=0.93 and r=0.84, respectively, P <0.01), indicating that both structural and physiological adjustments modified CO2 fixation capacity in these forest stands. Our novel approach to the study of transmitted radiation provides a tool for estimating structural and functional variables such as LAI, LUE and water content, which are key determinants of terrestrial productivity.     

Hydraulic architecture and water relations of a flood-tolerant tropical tree, Annona glabra

Hydraulic architecture parameters, water relation parameters and wood anatomy were studied in roots and shoots of the flood-tolerant tree Annona glabra L. on Barro Colorado Island, Panama. Hydraulic conductivity, leaf specific conductivity, and Huber value were similar to the corresponding values for tree species living in non-flooded habitats. The vulnerability of stems to loss of hydraulic conductivity resulting from embolism was low (50% loss of conductivity at -3.3 MPa). The lowest leaf water potential measured in the field was about -1.0 MPa, indicating that A. glabra has a large margin of safety from embolism, which may provide protection against rare drought events, or may be an adaptation to brackish mangrove habitats. Low absolute conductivity of roots was compensated for by an increase in the number of roots. More than two-thirds of whole-plant resistance to water flow was located in the roots.     

Seasonal variation of inorganic nitrogen and net mineralization in a salt marsh ecosystem

Inorganic nitrogen pools and net mineralization were estimated in three sites of a Tagus estuary salt marsh in Portugal throughout 1 year. Ammonium (NH₄ ⁺) was the major form of inorganic nitrogen found in the salt marsh soil. Extractable NH₄ ⁺ concentrations showed a marked seasonal pattern with a concentration peak during the hotter months of July/August. The great majority (>99%) of the total nitrogen in the soil was found in sedimented organic matter, not readily available for plant uptake. Net nitrogen mineralization, determined using a field incubation method, showed a peak during the months of June/July which resulted in an increase on nitrogen availability. With the exception of the lower salt marsh, estimated rates of in situ net nitrogen mineralization in the soil during summer were well related to the increase in plant aboveground biomass and plant nitrogen pools, indicating that the process is an important source of available nitrogen for plant uptake and growth. Annual net nitrogen mineralization ranged between 2.4 and 4.5gNm^–2yr^{– 1} being significantly higher for the lower salt marsh site. Rates of net nitrogen mineralization were relatively low during most of the year with a particularly active period from June to August, possibly due to an effect of temperature on soil microbial activity.     

Carbon, water and nutrient flux in Maya homegardens in the Yucatán peninsula of México

The Yucatán Peninsula of México has shallow soils and receives low amounts of precipitation, and has therefore low agricultural potential. Lacking large-scale irrigation from rivers and adequate rainfall, the indigenous Maya groups maintain agricultural productivity by adapting a variety of practices. Multistrata homegardens, one of their agricultural systems, have provided goods for trade, sale and personal consumption for many centuries. Nevertheless, an understanding of the controlling biological factors and interactions within these systems can lead to yield improvements. Photosynthetic rates, water use and litter production for a variety of species have been studied in these gardens to determine how Maya management impacts resource flow, productivity and diversity. When irrigated, diurnal photosynthetic rates nearly doubled for Manilkara zapota and water use increased two fold for M. zapota and Cordia dodecandra. Total litter production in traditional homegardens varied from 1,000 to 4,000 kg ha⁻¹ yr⁻¹ and ten arboreal species were found to contribute more than 33% of total litterfall biomass. Nutrient concentrations in the leaves of the predominant species were analyzed; Meliococcusbijugatus and Spondias purpurea were found to contribute the largest quantities of N, P and C. Our research indicates that species and structural diversity are critical to sustainability of homegardens, allowing efficient use and transfer of carbon, nutrients and water. This revised version was published online in June 2006 with corrections to the Cover Date.     

Spatial pattern of the density of Armillaria epiphytic rhizomorphs on tree collar in an oak stand

The density of Armillaria gallica epiphytic rhizomorphs on tree collar was mapped in a young stand of pedunculate oaks (Quercus robur). A quick method to estimate the rhizomorph density was developed, investigating 19 trees, and was used in the subsequent study. The method consists of measuring the frequency of rhizomorphs present on a grid applied to an exposed small area of the tree collar. The pattern in tree collar rhizomorph density was closely related to the pattern of stump colonization by Armillaria and stumps were therefore important as inoculum sources. Rhizomorph density on tree collar showed a strong aggregated spatial pattern which could not be explained by variability in the soil characteristics, in particular waterlogging, or by a spatial pattern in tree vigour. Moreover, rhizomorph density on tree collar did not depend on their dominance status.     

Relationship between root growth potential and field performance in Aleppo pine

Commercial stocks of Aleppo pine in Spain vary in quality, but there is no accepted standard for evaluating quality. A RGP test was applied to six commercial seedling stocklots at two dates (November, February) and under two test conditions (growth-chamber, greenhouse). The RGP’s predictive ability was evaluated on two contrasting sites. There was a considerable variation in the RGP depending on application date, test conditions and stock factors. The RGP results for November were correlated with each other but they did not explain outplanting performance. The February results in the growth-chamber correlated well with survival at both sites. Regression models explained survival both in the lower (R ² = 97%) and in the higher (R ² = 92%) quality sites. RGP has a valid predictive ability for this species although it is sensitive to the test conditions. In this sense, a shorter and more intensive test performed right before planting may be more reliable.     

Co‐expression of PACAP with VIP,SP and CGRP in the Porcine Nodose Ganglion Sensory Neurons

Our previous study revealed the expression of substance P (SP) and calcitonin gene‐related peptide (CGRP) in sensory distal ganglion of the vagus (nodose ganglion) neurons in the pig. As these neuropeptides may be involved in nociception, the goal of these investigations was to determine possible expression of vasoactive intestinal polypeptide (VIP), SP and CGRP in the pituitary adenylate cyclase‐activating polypeptide‐immunoreactive (PACAP‐IR) porcine nodose perikarya. Co‐expression of these substances was examined using a double‐labelling immunofluorescence technique. To reveal the ganglionic cell bodies, the pan‐neuronal marker protein gene product 9.5 (PGP 9.5) was used. Quantitative analysis of the neurons revealed that 67.25% of the PGP 9.5+ somata in the right‐side ganglion and 66.5% in the left side, respectively, co‐expressed PACAP‐IR. Moreover, 60.6% of the PACAP‐IR cells in the right‐side ganglion and 62.1% in the left, respectively, co‐expressed VIP. SP‐IR was observed in 52.2 and 39.9% of the right and left ganglia, respectively. CGRP was found in 27.7 and 34.1% of the right and left distal ganglion of the vagus, respectively. High level of co‐expression of PACAP with VIP, SP and CGRP in the distal ganglia of the vagus sensory perikarya directly implicates studied peptides in their functional interaction during nociceptive vagal transduction.