The structure of the upper atmosphere of mars: In situ accelerometer measurements from mars global surveyor

The Mars Global Surveyor (MGS) z-axis accelerometer has obtained over 200 vertical structures of thermospheric density, temperature, and pressure, ranging from 110 to 170 kilometers, compared to only three previous such vertical structures. In November 1997, a regional dust storm in the Southern Hemisphere triggered an unexpectedly large thermospheric response at mid-northern latitudes, increasing the altitude of thermospheric pressure surfaces there by as much as 8 kilometers and indicating a strong global thermospheric response to a regional dust storm. Throughout the MGS mission, thermospheric density bulges have been detected on opposite sides of the planet near 90 degreesE and 90 degreesW, in the vicinity of maximum terrain heights. This wave 2 pattern may be caused by topographically-forced planetary waves propagating up from the lower atmosphere.     

An Economics Approach to Hard Computational Problems

A general method for combining existing algorithms into new programs that are unequivocally preferable to any of the component algorithms is presented. This method, based on notions of risk in economics, offers a computational portfolio design procedure that can be used for a wide range of problems. Tested by solving a canonical NP-complete problem, the method can be used for problems ranging from the combinatorics of DNA sequencing to the completion of tasks in environments with resource contention, such as the World Wide Web.     

Polymorphs of Alumina Predicted by First Principles: Putting Pressure on the Ruby Pressure Scale

Fully optimized quantum mechanical calculations indicate that Al2O3 transforms from the corundum structure to the as yet unobserved Rh2O3 (II) structure at about 78 gigapascals, and it further transforms to Pbnm-perovskite structure at 223 gigapascals. The predicted x-ray spectrum of the Rh2O3 (II) structure is similar to that of the corundum structure, suggesting that the Rh2O3 (II) structure could go undetected in high-pressure x-ray measurements. It is therefore possible that the ruby (Cr3+-doped corundum) fluorescence pressure scale is sensitive to the thermal history of the ruby chips in a given experiment.     

The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)

We report the draft genome of the black cottonwood tree, Populus trichocarpa. Integration of shotgun sequence assembly with genetic mapping enabled chromosome-scale reconstruction of the genome. More than 45,000 putative protein-coding genes were identified. Analysis of the assembled genome revealed a whole-genome duplication event; about 8000 pairs of duplicated genes from that event survived in the Populus genome. A second, older duplication event is indistinguishably coincident with the divergence of the Populus and Arabidopsis lineages. Nucleotide substitution, tandem gene duplication, and gross chromosomal rearrangement appear to proceed substantially more slowly in Populus than in Arabidopsis. Populus has more protein-coding genes than Arabidopsis, ranging on average from 1.4 to 1.6 putative Populus homologs for each Arabidopsis gene. However, the relative frequency of protein domains in the two genomes is similar. Overrepresented exceptions in Populus include genes associated with lignocellulosic wall biosynthesis, meristem development, disease resistance, and metabolite transport.     

Strong regularities in world wide web surfing

One of the most common modes of accessing information in the World Wide Web is surfing from one document to another along hyperlinks. Several large empirical studies have revealed common patterns of surfing behavior. A model that assumes that users make a sequence of decisions to proceed to another page, continuing as long as the value of the current page exceeds some threshold, yields the probability distribution for the number of pages that a user visits within a given Web site. This model was verified by comparing its predictions with detailed measurements of surfing patterns. The model also explains the observed Zipf-like distributions in page hits observed at Web sites.     

Common Kibra alleles are associated with human memory performance

Human memory is a polygenic trait. We performed a genome-wide screen to identify memory-related gene variants. A genomic locus encoding the brain protein KIBRA was significantly associated with memory performance in three independent, cognitively normal cohorts from Switzerland and the United States. Gene expression studies showed that KIBRA was expressed in memory-related brain structures. Functional magnetic resonance imaging detected KIBRA allele-dependent differences in hippocampal activations during memory retrieval. Evidence from these experiments suggests a role for KIBRA in human memory.     

Penny ice cap cores, baffin island, canada, and the wisconsinan foxe dome connection: two states of hudson bay ice cover

Ice cores from Penny Ice Cap, Baffin Island, Canada, provide continuous Holocene records of oxygen isotopic composition (delta18O, proxy for temperature) and atmospheric impurities. A time scale was established with the use of altered seasonal variations, some volcanic horizons, and the age for the end of the Wisconsin ice age determined from the GRIP and GISP2 ice cores. There is pre-Holocene ice near the bed. The change in delta18O since the last glacial maximum (LGM) is at least 12.5 per mil, compared with an expected value of 7 per mil, suggesting that LGM ice originated at the much higher elevations of the then existing Foxe Dome and Foxe Ridge of the Laurentide Ice Sheet. The LGM delta18O values suggest thick ice frozen to the bed of Hudson Bay.     

A Comparison of Three Techniques for Detecting Bovine Herpesvirus Type 1 (BHV-1) in Naturally and Experimentally Contaminated Bovine Semen

Contents: Immune electron microscopy, hybridization (Sandwich, Southern-blot and dot-blot hybridization) as well as two cell culture inoculation techniques to detect bovine herpesvirus 1 (BHV-1) in naturally and artificially contamined bovine semen were compared. Immune electron microscopy was not a suitable method because of its low limit of detection. Dot-blot hybridization, as the most sensitive hybridization technique, could detect 150 pg BHV-1 DNA/semen straw (～ 10⁶TCID₅₀/ 500 μl semen). Best results were obtained by using cell culture techniques. With the first technique embryonic bovine lung cells (EBLC) on microtiterplates were inoculated with an ultracentrifuged pellet of seminal plasma (pelleting method). The second procedure comprised a dilution of 250 μl (1/2 content of a straw) in 6,25 ml cell culture medium which were overlayed on a confluent layer of EBLC in a 25 cm² flask. After an incubation of 4 hours at 37°C the medium was decanted and replaced by 6,5 ml fresh medium (dilution method). With both tissue culture methods as little as 5 TCID₅₀ of BHV-1 in 500 μl of artificially contaminated semen were detectable. However the dilution method was better suited than the pelleting method because toxic effects to cells were less pronounced. It was even possible to detect BHV-1 in naturally contaminated semen samples where all other methods failed. The DNA of virus isolates from semen showed three different restriction patterns. Inhalt: Vergleich dreier Methoden zum Nachweis von bovinem Herpesvirus Typ 1 (BHV-1) in natürlich und experimentell kontaminiertem Rindersamen Die Immunelektronenmikroskopie, die Hybridisation (Sandwich-, Southern-Blot- und die Dot-Blot Hybridisation) sowie zwei Zellkultur-Inokulationstechniken wurden zum Nachweis von bovinem Herpesvirus Typ-1 (BHV-1) in natürlich und künstlich kontaminiertem Stierensamen verglichen. Die Immunelektronenmikroskopie erwies sich dabei als zu wenig empfindliche Methode. Die Dot-Blot Hybridisation war die beste der Hybridbationsmethoden. Es lieβen sich damit bis zu 150 pg BHV-1 DNA/Paillette (～ 10⁶ TCID ₅₀ /500 μl Samen) nachweisen. Am besten eigneten sich Zellkulturmethoden. Eine erste Methode bestand darin, embyonale bovine Lungenzellen in Microtiterplatten mit einem Ultrazentrifugensediment des Samenplasmas zu inokulieren (pelleting method). In einem zweiten Verfahren wurde 1/2 Inhalt einer Pailette (250 μl) in 6,25 ml Zellkulturmedium verdünnt und damit ein Zellrasen von embyonalen bovinen Lungenzellen überschichtet. Nach 4 h bei 37°C wurde das Medium abgegossen und durch 6,5 ml neues Medium ersetzt (Verdünnungsmethode). Mit beiden Methoden lieβen sich 5 TCID₅₀ BHV-1 in 500 μl Rünstlich kontaminiertem Samen nachweisen. Die Verdünnungsmethode war aber besser geeignet, weil der toxische Effekt auf die Zellen geringgradiger war. Mit der Verdünnungsmethode lieβ sich aus Ejakulaten BHV-1 isolieren, auch in Fällen, in denen alle andern Methoden versagten. Die DNA's von Virusisolaten aus Rindersamen wiesen drei verschiedene Restriktionsmuster auf.     

Patterns of Follicular Growth in Superovulated Sheep and Influence on Endocrine and Ovarian Response

Objectives of this study were to characterize patterns of follicular development in sheep superovulated with purified follicle stimulating hormone (FSH) (OVAGEN^TM, ICP, Auckland, New Zealand) and to determine its influence on preovulatory events (onset of the oestrus behaviour and timing of the preovulatory luteinizing hormone surge) and ovarian response (ovulation rate and embryo yield). Number and size of all ≥ 23 mm follicles from the first FSH injection to withdrawal of progestagen sponges was determined by transrectal ultrasonography just prior to every FSH injection in nine Manchega ewes superovulated with eight decreasing doses (ml) (1.5 × 3, 1.25 × 2 and 1 × 3) of OVAGEN injected twice daily from 60 h before to 24 h after the withdrawal of 40 mg fluorogestone acetate sponges. Oestrous detection and jugular blood sampling for LH radioimmunoassay were performed every 3 h from 14 to 53 h after sponge removal and ovulation rate and number of embryos were determined 4 days after progestagen withdrawal. Administration of OVAGEN induced a significant rise (p < 0.0005) in the number of follicles ≥ 4 mm in size because of an increased growth in size of follicles from the first FSH injection to sponge removal, an increase in the number of newly detected follicles from 12 to 36 h of the first FSH dose (p < 0.005) and a decrease in regression rate from 24 h (p < 0.001). The number of follicles 2–3 mm in size at first FSH dose (10.4 ± 1.5) was positively correlated with the number of ≥ 4 mm follicles at 0 h (19.0 ± 2.7, p < 0.01). A higher number of ≥ 4 mm follicles at 0 h was related with an earlier appearance of oestrus (31.5 ± 1.5 h, p = 0.08) and LH surge (45.0 ± 2.3 h, p < 0.005), and a higher ovulation rate (18.2 ± 3.8, p < 0.005). On the other hand, the rate of embryo recovery was decreased in ewes with earlier preovulatory LH peaks (p < 0.005), with a shorter interval between oestrus and LH peak (p < 0.05).