Genomic Prediction of Arsenic Tolerance and Grain Yield in Rice: Contribution of Trait-Specific Markers and Multi-Environment Models

Many rice-growing areas are affected by high concentrations of arsenic(As). Rice varieties that prevent As uptake and/or accumulation can mitigate As threats to human health. Genomic selection is known to facilitate rapid selection of superior genotypes for complex traits. We explored the predictive ability(PA) of genomic prediction with single-environment models, accounting or not for trait-specific markers, multi-environment models, and multi-trait and multi-environment models, using the genotypic(1600 K SNPs) and phenotypic(grain As content, grain yield and days to flowering) data of the Bengal and Assam Aus Panel. Under the base-line single-environment model, PA of up to 0.707 and 0.654 was obtained for grain yield and grain As content, respectively; the three prediction methods(Bayesian Lasso, genomic best linear unbiased prediction and reproducing kernel Hilbert spaces) were considered to perform similarly, and marker selection based on linkage disequilibrium allowed to reduce the number of SNP to 17 K, without negative effect on PA of genomic predictions. Single-environment models giving distinct weight to trait-specific markers in the genomic relationship matrix outperformed the base-line models up to 32%. Multi-environment models, accounting for genotype × environment interactions, and multi-trait and multi-environment models outperformed the base-line models by up to 47% and 61%, respectively. Among the multi-trait and multi-environment models, the Bayesian multi-output regressor stacking function obtained the highest predictive ability(0.831 for grain As) with much higher efficiency for computing time. These findings pave the way for breeding for As-tolerance in the progenies of biparental crosses involving members of the Bengal and Assam Aus Panel. Genomic prediction can also be applied to breeding for other complex traits under multiple environments.     

The Anglesey lakes,Wales, UK—A conservation resource

1. The environment of the island of Anglesey, North Wales, UK, is described and related to the ecology of the lake systems present. 2. Estimates are given of the number and types of lakes present on the island. Sixteen biological Sites of Special Scientific Interest (SSSIs) have standing water as a recognized habitat feature and their reasons for receiving a conservation designation are discussed. 3. Brief reviews are given of the lacustrine flora, invertebrates, fish and aquatic bird populations of Anglesey and their importance in assessing the conservation value of a site. 4. These reviews are followed by detailed accounts of the current ecology of three of the island's lake systems—Llyn Coron, Llyn Dinam and Llyn Penrhyn—which occur within biological Sites of Special Scientific Interest. Original data are presented on their physical and chemical characteristics, diatom assemblages, macrophyte communities, littoral and open water zooplankton communities and macroinvertebrate assemblages. 5. Artificial enrichment, the introduction of alien species, the legacy of metal mining operations and recreational pressures are identified as the main threats to lake conservation on Anglesey. 6. The Anglesey Wetland Strategy, an informal operational level liaison procedure, is described. Using this mechanism, broad targets and indicative strategies are highlighted by the partner organizations active in wetland conservation on the island, and opportunities for collaboration are developed.     

Field measurement of the sheltering effect of vegetation on erodible land surfaces

Natural vegetation on erodible land surfaces, such as the loose sandy soils found in the southwestern United States and in Soviet Central Asia, absorbs part of the wind momentum flux (stress) and thus protects the erodible soil to a degree that depends on the geometry of plant distribution and profile. The sheltering effect of natural plants may be expressed as the ratio, R, of threshold friction velocity for the bare soil (determined in the laboratory or in specially prepared areas of bare soil in the field) to that for the naturally vegetated surface. We used new automated instrumentation to detect erosion thresholds in locations where erosion events are widely separated in time. Measured values of R were low for our most vegetated sites and nearer unity for the sparsely vegetated site.     

人参皂苷Rg3(R),Rg3(S),Rg5/Rk1对乙醇致小鼠记忆阻碍改善作用的影响

采用被动回避穿越法研究了人参皂苷Rg3(R),Rg3(S)和Rg5/Rk1(1∶1)对乙醇致小鼠记忆阻碍改善作用的影响。结果表明:灌服人参皂苷Rg3(R),Rg3(S)和Rg5/Rk110 mg/kg后,显著延长了小鼠避暗的潜伏期,尤其以人参皂苷Rg5/Rk1作用最为显著,Rg5/Rk1处理组的潜伏期是对照组的2.97倍,Rg3(R),Rg3(S)分别为对照组的2.35和2.53倍,差异极显著(P<0.01)。说明这些化合物具有改善乙醇致小鼠的记忆障碍的能力。     

若干家蚕品种的复壮及比较试验

对浙江省夏秋蚕品种薪杭,白云,丰1和54A等进行了充血复壮改良,基本稳定后的复壮系与现行生产系进行了生产性能的比较试验。结果表明复壮系在各项性状都有一定的提高,其中龄期经过,各品种的复壮系与生产系之间差别不大,只有薪杭丙和白云丙稍有延长。全茧量和茧层量基本上复壮系都比生产系有所提高。生命率差异比较大,奠中薪杭的复壮系低下生产系,差异达到显著水平,白云复壮系略微低于白云甲,但高于白云乙,丰1的复壮系与生产系无明显差异,54A则是复壮系高于生产系。良卵数除薪杭丙比薪杭甲略低外,其他品种的复壮系都比生产系显著提高,有的甚至达到极显著水平。说明复壮系在生产性能上有较大的改良,有一定的推广应用价值。     

Effects of increased ambient temperature and supplemental altrenogest before pregnancy establishment in gilts

Heat stress (HS) mitigation strategies are critically needed to combat the substantial economic effects on animal agriculture. The manifestations of seasonal infertility include delayed puberty onset, reduced conception rates, decreased litter size, and increased wean to estrus interval. To assess the effects of HS during early gestation and evaluate the benefit of supplemental altrenogest (ALT) as a mitigation strategy, 30 crossbred postpubertal gilts (157 ± 11 kg body weight) were subjected to estrous synchronization via 14 d oral administration of ALT. Artificial insemination during estrus was performed, and gilts were then placed into one of four treatment groups: HS (35 ± 1 °C for 12 h/31.60 ± 1 °C for 12 h) with (HSALT, n = 7) or without (HSCON, n = 7) 15 mg/d ALT supplementation or thermal neutral (TN; 20 ± 1 °C) conditions with (TNALT, n = 8) or without (TNCON, n = 8) 15 mg/d ALT supplementation until 12 d post-estrus (dpe). Administrating ALT occurred at 0600 hours from 3 to 12 dpe, and rectal temperatures (T_R) and respiration rates (RR) were recorded. Blood was collected via jugular venipuncture on 0, 4, 8, and 12 dpe. Gilts were euthanized humanely at 12 dpe followed by the collection of ovarian tissue, and uterine flushing for conceptus collection. In HS compared with TN gilts, RR and T_R were increased (P < 0.01) but unaffected by ALT supplementation. Feed intake was reduced (P < 0.01) by HS but unaltered by the ALT treatment. Corpora lutea (CL) weight was reduced (P < 0.01) in HSCON gilts when compared with TNCON and HSALT gilts despite progesterone concentrations in serum and luteal tissue not being affected by treatment (P ≥ 0.10). CL diameter was reduced (P ≤ 0.05) in HSALT gilts compared with other treatments. Interleukin-1β (IL1B) uterine flush concentration was not affected (P > 0.20) by environment or ALT supplementation, although moderate (P = 0.06) interaction between environment and ALT existed, as IL1B concentration in TNALT was increased (P = 0.03) compared with TNCON gilts. While environment did not affect conceptus development (P = 0.90), ALT supplementation advanced conceptus elongation (P < 0.01). Collectively, these data demonstrate that HS may affect luteal development before pregnancy establishment, and ALT increases conceptus elongation by 12 dpe.     

Marine-Derived Chitosan Nanoparticles Improved the Intestinal Histo-Morphometrical Features in Association with the Health and Immune Response of Grey Mullet (Liza ramada)

Marine-derived substances are known for their beneficial influences on aquatic animals’ performances and are recommended to improve intestinal health, immunity, and anti-oxidative status. The present study investigates the role of chitosan nanoparticles on the intestinal histo-morphometrical features in association with the health and immune response of Grey Mullet (Liza ramada). Chitosan nanoparticles are included in the diets at 0, 0.5, 1, and 2 g/kg and introduced to fish in a successive feeding trial for eight weeks. The final body weight (FBW), weight gain (WG), and specific growth rate (SGR) parameters are significantly increased while feed conversion ratio (FCR) decreases by chitosan nanoparticles compared to the control (p < 0.05). The morphometric analysis of the intestines reveals a significant improvement in villus height, villus width, and the number of goblet cells in chitosan-treated groups in a dose-dependent manner. Additionally, there is a positive correlation between the thickness of the enterocyte brush border and the chitosan dose, referring to an increasing absorptive activity. Histologically, the intestinal wall of Grey Mullet consists of four layers; mucosa, sub-mucosa, tunica muscularis (muscular layers), and serosa. The histological examination of the L. ramada intestine shows a normal histo-morphology. The epithelial layer of intestinal mucosa is thrown into elongated finger-like projections, the intestinal villi. The values of hemoglobin, hematocrit, red blood cells (RBCs), total protein (TP), albumin, and globulin are significantly increased in fish fed 1, and 2 g/kg of chitosan nanoparticles compared to fish fed 0 and 0.5 g/kg (p < 0.05). The highest levels of TP and albumin are observed in fish fed 1 g/kg diet (p < 0.05). The lysozyme activity and phagocytic index are significantly enhanced by feeding chitosan nanoparticles at 0.5, 1, and 2 g/kg, whereas the phagocytic activity is improved in fish fed 1 and 2 g/kg (p < 0.05). The highest lysozyme activity and phagocytic index are observed in fish fed 1 g/kg. SOD is significantly activated by feeding chitosan nanoparticles at 1 g/kg. Simultaneously, glutathione peroxidase (GPx) and catalase (CAT) activities also are enhanced by feeding chitosan at 1 and 2 g/kg, compared to fish fed 0 and 0.5 g/kg (p < 0.05). The highest GPx and CAT activities are observed in fish fed 1 g/kg (p < 0.05). Conversely, the malondialdehyde (MDA) levels are decreased by feeding chitosan at 1 and 2 g/kg, with the lowest being in fish fed 1 g/kg (p < 0.05). To summarize, the results elucidate that L. ramada fed dietary chitosan nanoparticles have a marked growth rate, immune response, and anti-oxidative response. These improvements are attributed to the potential role of chitosan nanoparticles in enhancing intestinal histo-morphometry and intestinal health. These results soundly support the possibility of using chitosan nanoparticles at 1–2 g/kg as a feasible functional supplement for aquatic animals.