Tree girdling increases soil N mineralisation in two spruce stands

Tree girdling is a common practice in forestry whenever trees are to be killed without felling. The effect of tree girdling on soil nitrogen (N) mineralisation was estimated in both an old and a young spruce forest. The dynamics of mineral N (NO₃⁻–N and NH₄⁺–N) and soil microbial biomass carbon (MBC) and N (MBN) were determined for different seasons. The in situ net N mineralisation was measured by incubating soil samples in stainless steel cylinders and the gross N mineralisation rates were measured by ¹⁵N pool dilution method. Mineral N concentrations increased significantly in the girdled plots in both old and young spruce forests and showed variations between soil horizons and between sampling times. Tree girdling significantly increased net N mineralisation in both spruce forests. Annual net N mineralisation was 64 and 39 kg N ha⁻¹ in O horizon of the girdled plots in old and young forest plots, respectively, compared to 25 and 21 kg N ha⁻¹ in the control plots. Annual N mineralisation in A horizon was similar between girdled and control plots (31 kg N ha⁻¹) in the old forest whereas in the young forest A horizon N mineralisation was about 2.5 times higher in the girdled plots. As a result, the annual carbon budget was significantly more positive in the girdled plots than in the control plots in both old and young forests. However, we found significantly higher gross N mineralisation rates in both horizons in the control plots than the girdled plots in the old forest, but no differences between the treatments in the young forest. The MBC and MBN contents only showed significant changes during the first three months of the experiment and were similar later on. They first decreased as girdling removed the root carbohydrate, amino and organic acid exudation from the C sources for microorganisms then increased two months after the treatment root dieback acted as a new source of C. Mineralising microorganisms enhanced the mineral N concentrations in girdled plots as a result of greater activity rather than larger population size.     

Evaluation of real-time RT-PCR assay for the routine intra vitam diagnosis of classical swine fever

The aim of the study was to evaluate the diagnostic quality of the real-time RT-PCR assay described by Hoffmann et al. [Hoffmann, B., Beer, M., Schelp, C., Schirrmeier, H., Depner, K., 2005. Validation of a real-time RT-PCR assay for sensitive and specific detection of classical swine fever. J. Virol. Methods 130, 36-44] for the routine intra vitam diagnosis of classical swine fever (CSF). We compared the assay with conventional diagnostic methods by using defined diagnostic material from an animal experiment with pigs showing different clinical forms of CSF. Compared to virus isolation and antigen ELISA an enhanced sensitivity of the real-time RT-PCR could be shown. We were able to detect all infected pigs regardless of the clinical course of CSF. CSF infection was detected already during the incubation period, during the entire clinical phase as well as at the beginning of convalescence when the first antibodies were detected and no virus could be isolated any more. In most cases, positive PCR results were obtained 2 days earlier than with virus isolation and 2-4 days earlier than with the antigen ELISA.     

Kinetics of the release of dissolved organic matter (DOM) from air‐dried and pre‐moistened soil material

In this study, the kinetics of soil organic matter (SOM) dissolution from soil samples in different states of moisture was investigated, using a continuous extraction method. The investigation distinguished three processes of SOM dissolution. They include an initial, fast process (probably hydrophilic dissolved organic matter) and two slow, rate limited processes, which probably correspond to hydrophobic dissolved organic matter (DOM). The second process indicates a slow, continuous release of DOM, whereas the third process is determined by a power law. The rate of the third process strongly depends on temperature and state of moisture. It is diffusion limited, with the diffusion control probably being located in the solid soil organic matter. This was explained by a gel structure, which slowly forms in the hydrating SOM and allows diffusion of mobile particles of SOM. The results show the importance of considering the moisture state of SOM for the kinetics of DOM dissolution.     

Averting the baiji syndrome: conserving habitat for critically endangered dolphins in Eastern Taiwan Strait

• 1. Numbering no more than 100 individuals and facing many threats, the geographically isolated Eastern Taiwan Strait population of Indo‐Pacific humpback dolphins (Sousa chinensis) is in peril. The estuarine and coastal waters of central‐western Taiwan have historically provided prime habitat for these dolphins, but environmental conditions today bear little resemblance to what they were in the past.
• 2. The humpback dolphins must share their habitat with thousands of fishing vessels and numerous factories built upon thousands of hectares of reclaimed land.
• 3. They are exposed to chemicals and sewage released from adjacent terrestrial activities. Noise and disturbance associated with construction, vessel traffic and military activities are features of everyday life for these animals.
• 4. Measures to slow the pace of habitat deterioration and reduce the many risks to the dolphins are urgently needed. As one practical step in this direction, this paper describes the habitat needs of these small cetaceans so that decision makers will be better equipped to define ‘priority habitat’ and implement much needed protection measures under the terms of local legislation.
• 5. The preferred habitat of these dolphins in Taiwan consists of shallow (<30 m), near‐shore marine waters with regular freshwater inputs.
• 6. For such a small, isolated and threatened population, ‘priority habitat’ should not be limited to areas of particularly intensive dolphin use or high dolphin density, but rather it should encompass the entire area where the animals have been observed (their current ‘habitat’), as well as additional coastal areas with similar bio‐physical features (‘suitable habitat’). Such a precautionary approach is warranted because the loss of only a few individuals could have serious population‐level consequences.
• 7. While conventional socio‐economic analysis might suggest that implementing protection measures over an area stretching ～350 km north–south along Taiwan's west coast and ～3 km out to sea would be too ‘costly’, the loss of this charismatic species from Taiwan's waters would send a troubling message regarding our collective ability to reconcile human activities with environmental sustainability. Copyright © 2010 John Wiley & Sons, Ltd.

     

Measurement and simulation of herbicide transport in macroporous soils

Lysimeter experiments were carried out to study pesticide transport through macroporous soils. In order to differentiate between the effects of soil structure and chemical behaviour, the leaching experiments were conducted using disturbed and undisturbed soil samples. Two herbicides with different sorption behaviours, and bromide as tracer were applied. The results were used to validate a dynamic simulation model which considers bypass flow in macropores. The simulation results show that the model is able to reproduce the soil suction within the soil as well as the spatial distribution of bromide and the herbicides. The continuity of the macropores is most important for the efficiency of bypass flow. The results indicate that cultivation practices like ploughing significantly influence the temporal and spatial distribution of the macropores. © 1998 SCI.     

Chlorogenic acid,a metabolite identified by untargeted metabolome analysis in resistant tomatoes,inhibits the colonization by Alternaria alternata by inhibiting alternariol biosynthesis

Tomato fruits can be contaminated by saprophytic strains of Alternaria alternata which is the reason for the frequent occurrence of Alternaria toxins like alternariol, alternariol monomethylether or tenuazonic acid in these types of products. It was shown earlier that alternariol is a colonization factor for tomatoes. In the current analysis two different tomato genotypes were analysed by untargeted comprehensive two-dimensional gas chromatography mass spectrometry (GC×GC-MS). This analysis revealed clear differences in the metabolic profiles which were paralleled by differences in resistance towards Alternaria colonization. One of the genotypes was more resistant against A. alternata infection and contained high amounts of chlorogenic acid in contrast to the other genotype which was sensitive against infection. In in vitro analysis, chlorogenic acid reduced alternariol biosynthesis during the first days of growth of A. alternata. Expression analysis of the alternariol polyketide synthase gene, a key gene in the biosynthesis of alternariol, also revealed a temporal reduction in its expression in the first phases of growth. However by chromatographic analysis it could be demonstrated that chlorogenic acid was degraded over time. This degradation leads to a relief of inhibition resulting in an only temporal inhibition of alternariol biosynthesis. In vivo colonization experiments revealed that chlorogenic acid reduces colonization of tomatoes by A. alternata in a concentration dependent manner, which however is partly counteracted by the addition of alterariol.     

Application of mycorrhizal roots improves growth of tropical tree seedlings in the nursery: a step towards reforestation with native species in the Andes of Ecuador

Most tree species in tropical mountain rain forests are naturally associated with arbuscular mycorrhizal fungi. Previous studies in southern Ecuador of 115 tree species revealed that only three species were not associated with arbuscular mycorrhizal fungi. Seedlings of tropical tree species raised in the nursery may need to be associated with arbuscular mycorrhizal fungi to survive transplantation shock in higher numbers. Methods for establishing plantations with native tree species are not yet established for Ecuador. Thus, we investigated the feasibility of using mycorrhizal roots of seedlings of Inga acreana, Tabebuia chrysantha, Cedrela montana and Heliocarpus americanus that had trapped mycorrhizal fungi from forest humus in the nursery to inoculate C. montana and H. americanus with native arbuscular mycorrhizal fungi. Inoculation with either a mixture of mycorrhizal roots from the four species or only with mycorrhizal roots from the same tree species were compared with effects of moderate fertilization. Assessment of plant growth and mycorrhizal status of 6-months-old Cedrela montana and Heliocarpus americanus revealed an improvement in growth and diverse associated fungi through mycorrhizal root inoculation in comparison with moderate fertilization. Moderate fertilization did not suppress mycorrhization.     

Detection of head blight (Fusarium ssp.) in winter wheat by color and multispectral image analyses

The use of camera vision to automatically detect head blight (scab) on wheat ears could provide information about the severity of this dangerous disease and help meet future food traceability requirements. Fusarium spp. is dangerous for both human and animal consumption and the ability to monitor symptom location and severity before the harvested product is further processed or stored could help determine whether the grain is fit for human/animal consumption, for bio-conservation, or is completely unusable.To generate various infection levels, field trials were conducted in 2008 and 2009 using wheat varieties with differing levels of susceptibility to the disease; plots were artificially infected with a spore suspension. A color (red, green, and blue) and a multispectral (red, infrared) camera system with real-time image analysis software were developed and compared to detect disease symptoms in the plots.The chlorophyll defect of the infected wheat ears was classified against the image background by setting binarization thresholds. The result was a black and white image. Single pixels or tiny clusters of pixels not belonging to the symptoms were eliminated by setting an area threshold. For both systems, a linear correlation was found between the camera and the visually detected disease levels of the wheat ears in the plots.In the non-infected control plots without disease symptoms, the multispectral system accurately measured “no disease” even though the digital color system detected too much infection (i.e., a false positive). The multispectral system showed a superior calibration capacity. While the color system had to calibrate for each variety, the multispectral system used only one calibration step before starting the measurements.