Dual Trichoderma consortium mediated elevation of systemic defense response against early blight in potato

European Journal of Plant Pathology - The annual crop loss caused due to phytopathogens is a serious problem affecting food security. To overcome the losses due to phytopathogens, the application...     

Predicting bending rigidity of woven fabrics by neuro-genetic hybrid modeling

The possibility of prediction of bending rigidity of cotton woven fabrics with the application of Neuro-genetic model has been explored. For this purpose, number of cotton grey fabrics meant for apparel end-use was desized, scoured, and relaxed. The fabrics were then conditioned and tested for bending properties. A feed-forward neural network model was first formed and trained with adaptive learning rate back-propagation with momentum. In the second model, a hybrid learning strategy was adopted. A genetic algorithm was first used as a learning algorithm to optimize the number of neurons and connection weights of the neural network. Later, a back-propagation was applied as a local search algorithm to achieve global optima. Results of hybrid neural network model were compared with that of back-propagation neural network model in terms of their prediction performance. Results show that the prediction by Neuro-genetic model is better in comparison with that of back-propagation neural model.     

Prevalence of Bovine viral diarrhoea virus (BVDV) antibodies among sheep and goats in India

The aim of this study was to determine the prevalence of pestivirus antibodies in sheep and goats in India. A total of 2803 serum samples collected between 2004 and 2008 from 1777 sheep in 92 flocks and 1026 goats in 63 flocks belonging to 13 states were tested by competition ELISA for detection of pestivirus antibodies. In sheep, the true prevalence rate was 23.4% (95% confidence interval: 22.9%–27.0%) and in goats it was 16.9% (95% CI: 16.4%–21.3%). The flock level seroprevalence was 66.3% for sheep and 54.0% for goats. Geographical variation in individual and flock prevalence was highly significant. A significant association (p?<?0.05) was found between sheep and goat flocks having cattle contact and the flock level seroprevalence. The seroprevalence was lower in 6 months–1 year age group compared to the 1–2 year and >2 year age groups in both sheep and goats. Cross neutralization studies on 61 seropositive sheep and 34 seropositive goat samples representing all positive flocks, exhibited > four fold higher titre to bovine viral diarrhoea virus type 1 (BVDV-1) in 41 sheep and 23 goat samples and to BVDV-2 in one sheep and goat each. This study for the first time showed serological evidence of wide spread BVDV infections in Indian sheep and goats, with BVDV-1 predominating and BVDV-2 occasionally besides highlighting the potential risk of infection to other species, which needs to be considered whenever BVD control measures are initiated.     

Oxidant/antioxidant balance, minerals status and apoptosis in peripheral blood of dogs naturally infected with Dirofilaria immitis

The present study was aimed to examine lipid peroxides, antioxidants, zinc, copper, iron panels and apoptosis in peripheral blood of dogs with clinical dirofilariosis. In comparison to healthy control, erythrocytic lipid peroxides level and superoxide dismutase activity were significantly (P<0.01) higher in diseased dogs. However, level of reduced glutathione and activities of glutathione peroxidase, glutathione-S-transferase and catalase were significantly (P<0.01) lower in diseased dogs. Blood zinc, copper and iron levels in dogs with dirofilariosis were significantly (P<0.01) lower than the healthy control. The percent apoptotic peripheral leukocytes were significantly higher in dogs with dirofilariosis in comparison with healthy control. From the present study, it is concluded that significant alterations in oxidant/antioxidant balance, mineral status and rate of apoptosis in peripheral blood may be implicated in the pathogenesis of clinical canine dirofilariosis.     

Development of real-time PCR assay for the detection of Mycoplasma bovis

Mycoplasma bovis is one of the important bovine mycoplasma involved in economically important clinical conditions like respiratory diseases, otitis media, and mastitis. The present study was undertaken with the objective of developing a SYBR Green dye-based real-time PCR assay targeting uvrC gene for the diagnosis of M. bovis. The analytical sensitivity and specificity of the assay were evaluated. The test showed 10³-fold more sensitivity than conventional PCR and detected down to 100 fg level of DNA. It was found to be specific, as no cross reactivity was shown with other related bacteria and Mycoplasma species. The developed assay was able to detect down to 40 copies of uvrC gene from spiked bovine milk samples. At present, this developed assay may be used as a valuable diagnostic tool for the detection of Mycoplasma bovis.

     

Relationship between endometritis and oxidative stress in the follicular fluid and luteal function in the buffalo

In this study, alteration in the follicular fluid composition and luteal function was investigated in the buffalo with endometritis. Genitalia were classified into cytological and purulent endometritis on the basis of polymorphonuclear cell cut off while non‐endometritis served as control (n = 10/group). In the follicular phase, the number of surface follicles was counted, diameter of the largest follicle was measured and the follicular fluid was assayed for total protein, cholesterol, malondialdehyde (MDA), total antioxidant capacity (TAC), oestradiol (E₂) and progesterone (P₄). The P₄ content of corpus luteum during mid‐luteal phase was estimated by radioimmunoassay. Ovaries from the follicular phase of oestrous cycle showed no significant difference in the total number of surface follicles, size of the largest follicle and volume of follicular fluid in the buffaloes with and without endometritis (p > .05). However, the antral fluid of the largest follicle from the genitalia of buffalo with cytological and purulent endometritis showed a significant decrease in the concentration of total protein, cholesterol, TAC and E₂ and a significant increase in the concentration of MDA and P₄ (p < .05). The results indicated that there is an association between endometritis and decreased ovarian function.     

Characterisation of cultivated breeding lines of eggplant (Solanum melongena L.) and related wild Solanum species from India

Immature fruit of cultivated species of eggplant (Solanum melongena L.) are commonly used as a summer vegetable in India. Rich morphological variation exists among the cultivated species of eggplant in different growing regions of the country. We have characterised 24 breeding lines of Solanum spp., including 20 eggplant cultivars and four wild species of eggplant, based on 13 morphological characters using Mahalonabis D² statistics. All 24 breeding lines of Solanum spp., including the 20 eggplant cultivars and four wild species, were grouped into four clusters by agglomerative clustering. Cluster II and Cluster IV contained the most accessions (eight each), while Cluster I and Cluster III had four accessions each. The highest inter-cluster (D²) distance (158.33) was observed between Cluster I and Cluster II, followed by Cluster I and Cluster III (108.48), and Cluster II and Cluster IV (102.96), which indicated that accessions in Cluster I and Cluster II were more divergent than those in the other clusters. The highest intra-cluster distance (5.80) was observed in Cluster IV, with eight genotypes, and the lowest intra-cluster distance (2.21) was observed in Cluster II, also with eight genotypes. The intra-cluster distances in all four clusters were lower than the inter-cluster distances, which indicated that genotypes within the same cluster were closely related. Genotypes in Cluster IV had the maximum number of flowers per cluster (3.63), the highest number of fruit per cluster (3.25), and number of fruit per plant (208.63), which revealed that genotypes could be selected from Cluster IV for these characters. The first three principal components (PC1, PC2, and PC3) accounted 73.99% of the total variation among the 24 genotypes. These phenotypic data increase the feasibility of prioritising breeding lines in a crossing programme based on the uniqueness of their desirable morphological traits.     

Conventional and contemporary approaches for drought tolerance rice breeding: Progress and prospects

Drought is becoming a major threat to rice farming across the globe owing to the depletion of water tables in rice-growing belts. Drought affects rice plants at multiple stages, causing damage at morphological and physio-biochemical levels, leading to severe losses that exceed losses from all other stresses. The amalgamation of conventional breeding methods with modern molecular biology tools and biometrical methods could help accelerate the genetic gain for drought tolerance in rice. Many drought-tolerance traits with genetic determinants have been identified and exploited for tolerance rice variety breeding. The integration of genome-wide association study and genomic selection tools with speed breeding shortened the breeding cycle and aided in rapid improvement of genetic gain. In this review, we emphasized the progress made through classical breeding as well as the limitations and usefulness of current genomic methods in improving drought tolerance. We briefly addressed methods for identifying genetic determinants for drought tolerance and deploying them through genomics-assisted breeding programmes to develop high-yielding drought-tolerant rice cultivars.     

Identification of novel quantitative trait loci associated with brown planthopper resistance in the rice landrace Salkathi

The brown planthopper (BPH) is a potent pest of rice in Asia and Southeast Asia. Host resistance has been found to be the most suitable alternative to manage the insect. But varietal resistance has been found to be short-lived. There has been a constant search for alternate resistance genes. We developed an F₈ recombinant inbred population for the BPH resistance gene in Salkathi, an indica landrace from Odisha, India. Phenotyping of RILs against the BPH population at Cuttack, Odisha showed continuous skewed variation with four peaks at 2.1–3.0, 4.1–5.0, 6.1–7.0 and 8.1–9.0 SES score, suggesting the involvement of quantitative loci for resistance to BPH in Salkathi. Mapping showed the presence of two QTLs on the short arm of chromosome 4. One QTL, with phenotype variance of 37.02% is located between the markers RM551 and RM335. The other QTL, with phenotype variance of 7.1% is located between markers RM335 and RM5633. The two QTLs have been designated as qBph4.3 and qBph4.4. QBph4.3 seems to be a novel QTL associated with BPH resistance. We have successfully transferred qBph4.3 and qBph4.4 into two elite rice cultivars, Pusa 44 and Samba Mahsuri. Fine mapping of the identified QTLs may lead to a successful transfer of QTLs into other elite germplasm backgrounds.