Positional syntenic cloning and functional characterization of the mammalian circadian mutation tau

The tau mutation is a semidominant autosomal allele that dramatically shortens period length of circadian rhythms in Syrian hamsters. We report the molecular identification of the tau locus using genetically directed representational difference analysis to define a region of conserved synteny in hamsters with both the mouse and human genomes. The tau locus is encoded by casein kinase I epsilon (CKIepsilon), a homolog of the Drosophila circadian gene double-time. In vitro expression and functional studies of wild-type and tau mutant CKIepsilon enzyme reveal that the mutant enzyme has a markedly reduced maximal velocity and autophosphorylation state. In addition, in vitro CKIepsilon can interact with mammalian PERIOD proteins, and the mutant enzyme is deficient in its ability to phosphorylate PERIOD. We conclude that tau is an allele of hamster CKIepsilon and propose a mechanism by which the mutation leads to the observed aberrant circadian phenotype in mutant animals.     

Anti-Mycobacterial Nucleoside Antibiotics from a Marine-Derived Streptomyces sp. TPU1236A

Five new nucleoside antibiotics, named streptcytosines A–E (1–5), and six known compounds, de-amosaminyl-cytosamine (6), plicacetin (7), bamicetin (8), amicetin (9), collismycin B (10), and SF2738 C (11), were isolated from a culture broth of Streptomyces sp. TPU1236A collected in Okinawa, Japan. The structures of new compounds were elucidated on the basis of their spectroscopic data (HRFABMS, IR, UV, and 2D NMR experiments including ¹H-¹H COSY, HMQC, HMBC, and NOESY spectra). Streptcytosine A (1) belonged to the amicetin group antibiotics, and streptcytosines B–E (2–5) were derivatives of de-amosaminyl-cytosamine (6), 2,3,6-trideoxyglucopyranosyl cytosine. Compound 1 inhibited the growth of Mycobacterium smegmatis (MIC = 32 µg/mL), while compounds 2–5 were not active at 50 µg/disc. Bamicetin (8) and amicetin (9) showed the MICs of 16 and 8 µg/mL, respectively.     

Effects of late sowing on soybean yields and yield components in southwestern Japan

ABSTRACT

Soybean production in southwestern Japan tends to be unstable owing to wet soils during the rainy season. Although late sowing after the rainy season can avoid excess water, information on its yield potential is limited. The objective of this study was to reveal the effect of late sowing on yields and yield components of new soybean cultivars developed for warm regions. The experiment was conducted in 2016 and 2017 in Fukuyama, Hiroshima, Japan. Upland fields converted from paddy fields with a subirrigation system were planted in June (normal) or July (late sparse or late dense). Lodging was prevented with a net. The effects of late sowing and dense treatment were analyzed in relation to solar radiation use. In 2016, differences in yield among cultivars and among environments were not significant. In 2017, yield was significantly reduced following late sparse sowing. The total aboveground dry matter at maturity was correlated with total solar radiation intercepted (r = 0.76) but not with radiation use efficiency (r = 0.47). Late sowing increased harvest index (HI) significantly from 0.464 to 0.571 in 2016 and from 0.524 to 0.585 in 2017, but density had no significant effect. The changes in HI were correlated with stem dry weight (r = ?0.80 in 2016 and r = ?0.79 in 2017) rather than seed yield (r = 0.08, n.s. in 2016 and r = 0.19, n.s. in 2017). Thus, under irrigation, late dense sowing might stabilize yield in southwestern Japan because of higher HI.

Abbreviations: DM: dry matter; FOEAS: farm-oriented enhancing aquatic system; HI: harvest index; RUE: radiation use efficiency     

Isolation of influenza A viruses from migratory waterfowl in San-in District, western Japan in the winter of 1983-1984

Certain species of winter migratory waterfowl in San-in District, western Japan, were surveyed for influenza virus from November 1983 to March 1984. Faeces of the waterfowl were collected regularly at five stations. Eleven influenza A viruses including H5N3 and H10N4 subtypes were isolated from 450 faecal samples from whistling swans, 28 viruses including H2N2 and H10N4 subtypes were isolated from 362 faecal samples from pintails; and subtype H13N6 was isolated from 240 faecal samples of black-tailed gulls.     

Two new tryptamine derivatives, leptoclinidamide and (-)-leptoclinidamine B, from an Indonesian ascidian Leptoclinides dubius

Two new tryptamine-derived alkaloids, named as leptoclinidamide (1) and (-)-leptoclinidamine B (2), were isolated from an Indonesian ascidian Leptoclinides dubius together with C2-α-D-mannosylpyranosyl-L-tryptophan (3). The structure of 1 was assigned on the basis of spectroscopic data for 1 and its N-acetyl derivative (4). Compound 1 was an amide of tryptamine with two β-alanine units. Although the planar structure of 2 is identical to that of the known compound (+)-leptoclinidamine B (5), compound 2 was determined to be the enantiomer of 5 based on amino acid analysis using HPLC methods. Compounds 1 to 4 were evaluated for cytotoxicity against two human cancer cell lines, HCT-15 (colon) and Jurkat (T-cell lymphoma) cells, but none of the compounds showed activity.     

Plant–Water Relations of Kidney Bean Plants Treated with NaCl and Foliarly Applied Glycinebetaine

Salinity is at present one of the most serious environmental problems influencing crop growth. It has been extensively demonstrated that salinity affects several physiological processes in the plant, including the plant–water relations of most salt-sensitive crops species. In this study, the effects of salinity on the plant–water relations of kidney bean ( Phaseolus vulgaris L.) and the possibility that foliarly applied glycinebetaine improves these water relations are examined. Kidney bean plants were grown in a greenhouse and treated with 0, 30, 50 and 100 m M NaCl, combined with 0, 10 and 30 m M glycinebetaine in foliar applications. Increased salinity levels decreased stomatal conductance, photosynthetic rate, transpiration and leaf relative water content in the 30, 50 and 100 m M treatments relative to the control treatment. Glycinebetaine applications of 10 m M increased stomatal conductance at 50 m M NaCl, ameliorating significantly the effect of salinity on water relations through increases in the leaf relative water content. At 100 m M NaCl, 30 m M glycinebetaine applications in particular contributed to osmotic stress, and had an adverse effect on plants. Our experiment suggests that glycinebetaine can be used as an alternative treatment to reduce the effects of salt stress on the water relations of salt-sensitive plants, but only to limited salinity levels. Furthermore, the improvement in the water status of kidney beans was dose dependent, suggesting that the concentration of glycinebetaine essential for the survival of salt-sensitive plants is species specific and must be determined individually for each plant species.     

Simplified culture method of detached ears and its application to vernalization in wheat

Summary The effects of the addition of sulfurous acid into culture solution and of cold treatment of the solution were examined to simplify the culture of detached wheat ears. In the simplified method, detached ears could be cultured at room temperature on the liquid medium containing 100 g/l sucrose and 0.075% sulfurous acid without any sterilization. The immature seeds in detached ears cultured by this method were treated with low temperature or with chemicals known to have vernalizing effect. The chemical treatment did not affect the chilling requirement of immature embryos, although photoperiodic response and narrow-sense earliness were reduced by kinetin and trypsin. The low temperature treatment drastically affected the chilling requirement, and fully vernalized mature seeds having normal germinability were obtained by treating the detached ears in culture with low temperature from 10 days after anthesis.     

Evolution of meson science in Japan

Forty years after Yukawa predicted the existence of mesons, experimental research activities with the use of mesons were started in Japan. Particles of the "second generation," which have nothing to do with the structure of ordinary materials, such as muons, K mesons, and other exotic particles have been exploited as unique probes to study new constituents of matter.     

Resetting central and peripheral circadian oscillators in transgenic rats

In multicellular organisms, circadian oscillators are organized into multitissue systems which function as biological clocks that regulate the activities of the organism in relation to environmental cycles and provide an internal temporal framework. To investigate the organization of a mammalian circadian system, we constructed a transgenic rat line in which luciferase is rhythmically expressed under the control of the mouse Per1 promoter. Light emission from cultured suprachiasmatic nuclei (SCN) of these rats was invariably and robustly rhythmic and persisted for up to 32 days in vitro. Liver, lung, and skeletal muscle also expressed circadian rhythms, which damped after two to seven cycles in vitro. In response to advances and delays of the environmental light cycle, the circadian rhythm of light emission from the SCN shifted more rapidly than did the rhythm of locomotor behavior or the rhythms in peripheral tissues. We hypothesize that a self-sustained circadian pacemaker in the SCN entrains circadian oscillators in the periphery to maintain adaptive phase control, which is temporarily lost following large, abrupt shifts in the environmental light cycle.