Soil organic carbon quality in forested mineral wetlands at different mean annual temperature

Forested mineral soil wetlands (FMSW) store large stocks of soil organic carbon (SOC), but little is known on: (i) whether the quality of SOC stored in these soils (proportion of active versus more resistant SOC compounds) differs from SOC in upland soils; (ii) how the quality of SOC in FMSW varies with mean annual temperature (MAT); and (iii) whether SOC decomposition rates in these environments respond to warming and drying more strongly than those observed in upland soils. To address this substantial knowledge gap, we identified nine FMSW and fifteen paired upland forest sites across three bioregions in North America (sub-alpine in Colorado; north-temperate in Minnesota; and south-temperate in South Carolina) to test the following three hypotheses. First, FMSW store a higher proportion of active SOC compared with upland systems because long anaerobic periods favor the accumulation of labile substrates. Second, in FMSW, SOC quality decreases from cold to warm bioregions because high quality detritus accumulates preferentially at cool sites where decomposition is slow. Finally, decomposition of SOC in FMSW will respond more strongly to warming under aerobic conditions than SOC from upland forest soils because of higher accumulation of active SOC in FMSW. To test these hypotheses, we incubated FMSW and upland forest soils at two constant temperatures (10 and 30 °C) for 525-d under aerobic conditions and constant moisture. In contrast to our first hypothesis, we observed similarly rapid depletion of active SOC compounds at initial stages of incubation across FMSW and upland sites, and across the 525-d incubations we observed overall lower SOC decomposition rates in our FMSW soils. In line with our second hypothesis, and across FMWS and upland soils, we found greater SOC loss in the sub-alpine bioregion than both temperate regions. In contrast to our last hypothesis, we found no difference in the temperature sensitivity (Q₁₀) of SOC decomposition in FMSW and upland forest soils. Critically, total SOC loss (g SOC per g soil) was larger in FMSW because of the large amount of SOC stored in these ecosystems, indicating that despite a lack of difference between FMSW and upland responses, the total release of C from FMSW that could result from global warming may be large.     

Panagrellus redivivus mass produced on solid media as live food for Litopenaeus vannamei larvae

The free‐living soil nematode Panagrellus redivivus is well known to be an excellent food source for first feeding fish larvae. It represents an alternative to the highly expensive Artemia, which is commonly used. The lack of a proper method for mass production of P. redivivus has prevented its wider use in commercial hatcheries. A new cultivation method allows the production of a sufficient quantity of nematodes to deliver a standardized and permanently available live food of high quality, throughout the larval rearing period. In two experiments – carried out at the Centro de Investigación en Alimentación y Desarrollo, Mexico – several feeding regimes were established to prove the quality of the mass produced P. redivivus for larvae of Litopenaeus vannamei, the Pacific white shrimp. Two different nematode treatments were compared with a no‐feed group and a control group that was fed with Artemia. All treatments had an additional algal co‐feed and were run in five replicates. Panagrellus redivivus was cultured on two different media (wheat/corn flour and oat flour) to compare these for their suitability as high‐quality live food for the larvae. Shrimp fed nematodes grown on wheat/corn medium reached the postlarval stage earlier than those from other treatments. The nematode treatments showed promising results; however, further research is needed on the development of improved culture media or enrichment methods to further increase the nutritional value of P. redivivus.     

Comparative genome and proteome analysis of Anopheles gambiae and Drosophila melanogaster

Comparison of the genomes and proteomes of the two diptera Anopheles gambiae and Drosophila melanogaster, which diverged about 250 million years ago, reveals considerable similarities. However, numerous differences are also observed; some of these must reflect the selection and subsequent adaptation associated with different ecologies and life strategies. Almost half of the genes in both genomes are interpreted as orthologs and show an average sequence identity of about 56%, which is slightly lower than that observed between the orthologs of the pufferfish and human (diverged about 450 million years ago). This indicates that these two insects diverged considerably faster than vertebrates. Aligned sequences reveal that orthologous genes have retained only half of their intron/exon structure, indicating that intron gains or losses have occurred at a rate of about one per gene per 125 million years. Chromosomal arms exhibit significant remnants of homology between the two species, although only 34% of the genes colocalize in small "microsyntenic" clusters, and major interarm transfers as well as intra-arm shuffling of gene order are detected.     

Changes in albacore tuna habitat in the northeast Pacific Ocean under anthropogenic warming

Albacore tuna are widespread in the North Pacific Ocean and the basis of an important commercial fishery. These fish live mainly within a fairly narrow thermal niche range defined by sea surface temperature (SST) isotherms between 14 and 19°C. Because the fish's thermal range coincides with strong latitudinal temperature gradients off the northwest coast of North America, there is a great deal of seasonal and interannual variability in the distribution of these fish, and a significant potential for a new habitat in this region with anthropogenic climate change. We use historical catch and effort data from the Canadian troll fleet to define the fish's thermal niche, and document observed shifts in distribution associated with interannual climate variability. We then use an ensemble of climate model simulations from the Coupled Model Intercomparison Project to estimate northward extension of the potential habitat under anthropogenic warming scenarios. A potential new habitat is about half a million square kilometres even under a moderate mitigation scenario. Estimates are smaller for some months of the year in which the fishery is conducted, but as well as opening up new regions, the length of season in which the fishery is active may be extended in the northern part of the range. However, much of the potential new habitat will be in oceanic waters with relatively low productivity. Our estimated area of potential habitat is based on the fish's thermal niche and assumes that other biologically important factors such as food will not be limiting.     

From regionally predictable to locally complex population structure in a freshwater top predator: river systems are not always the unit of connectivity in Northern Pike Esox lucius

Contemporary genetic diversity is the product of both historical and contemporary forces, such as climatic and geological processes affecting range distribution and continuously moulded by evolutionary forces selection, gene flow and genetic drift. Predatory freshwater fishes, such as Northern Pike Esox lucius, commonly exhibit small population sizes, and several local populations are considered endangered. Pike inhabit diverse habitat types, including lakes, rivers and brackish marine waters, thus spanning from small isolated patches to large open marine systems. However, pike population structure from local to regional scales is relatively poorly described, in spite of its significance to developing conservation measures. We analysed microsatellite variation in a total of 1185 North European pike from 46 samples collected across both local and regional scales, as well as over time, to address two overarching questions: Is pike population structure associated with local and/or regional connectivity patterns, and which factors likely have the main influence on the contemporary distribution of genetic diversity? To answer this, we combined estimators of population diversity and structure to assess evidence of whether populations within (i) habitats, (ii) drainage systems and (iii) geographical regions are closer related than among these ranges, and whether patterns are temporally stable. Contrasting previous predictions that genetic drift obscures signals of postglacial colonisation history, we identified clear regional differences in population genetic signatures, suggesting a major effect of drainage divides on colonisation history and connectivity. However, several populations deviated from the general pattern, showing that local processes may be complex and need to be examined case‐by‐case.     

Polymorphic mountain whitefish (Prosopium williamsoni) in a coastal riverscape: size class assemblages,distribution, and habitat associations

We compared the assemblage structure, spatial distributions, and habitat associations of mountain whitefish (Prosopium williamsoni) morphotypes and size classes. We hypothesised that morphotypes would have different spatial distributions and would be associated with different habitat features based on feeding behaviour and diet. Spatially continuous sampling was conducted over a broad extent (29 km) in the Calawah River, WA (USA). Whitefish were enumerated via snorkelling in three size classes: small (10–29 cm), medium (30–49 cm), and large (≥50 cm). We identified morphotypes based on head and snout morphology: a pinocchio form that had an elongated snout and a normal form with a blunted snout. Large size classes of both morphotypes were distributed downstream of small and medium size classes, and normal whitefish were distributed downstream of pinocchio whitefish. Ordination of whitefish assemblages with nonmetric multidimensional scaling revealed that normal whitefish size classes were associated with higher gradient and depth, whereas pinocchio whitefish size classes were positively associated with pool area, distance upstream, and depth. Reach‐scale generalised additive models indicated that normal whitefish relative density was associated with larger substrate size in downstream reaches (R² = 0.64), and pinocchio whitefish were associated with greater stream depth in the reaches farther upstream (R² = 0.87). These results suggest broad‐scale spatial segregation (1–10 km), particularly between larger and more phenotypically extreme individuals. These results provide the first perspective on spatial distributions and habitat relationships of polymorphic mountain whitefish.     

Tyrosine hydroxylase activity and dopamine turnover of rainbow trout (Oncorhynchus mykiss) brain: the special status of the hypothalamus

The dynamics of catecholamine (CA)-synthesis enzymes have been poorly studied in fish. Tyrosine hydroxylase (TH), the rate-limiting enzyme of CA synthesis has been only studied inin vitro conditions. In the present report thein vivo CA synthesis and the CA metabolism were studied in different regions of the forebrain of the rainbow trout. Levels of norepinephrine (NE), dopamine (DA), 3,4-dihydroxyphenylacetic acid (DOPAC) and the rate of accumulation of 3,4-dihydroxyphenylalanine (DOPA) were determined by HPLC following a treatment with hydroxybenzylhydrazine (NSD), a potential inhibitor of DOPA decarboxylase. Kinetics of the accumulation of DOPA and of the decline of DOPAC were in agreement with those found in rat, evidencing that the accumulation of DOPA following NSD can be used in trout to quantify thein vivo enzymatic activity of tyrosine hydroxylase. Experiments using treatment with NSD or with methyl-p-tyrosine reached a same conclusion: the DA neuronal activity in trout is much higher than NE neuronal activity. However, the hypothalamus had high DA levelsvs. lowin vitro andin vivo TH activities and exhibited a low CA turnover.