Toward the Identification of Novel Antimicrobial Agents: One-Pot Synthesis of Lipophilic Conjugates of N-Alkyl d- and l-Iminosugars

In the effort to improve the antimicrobial activity of iminosugars, we report the synthesis of lipophilic iminosugars 10a–b and 11a–b based on the one-pot conjugation of both enantiomeric forms of N-butyldeoxynojirimycin (NBDNJ) and N-nonyloxypentyldeoxynojirimycin (NPDNJ) with cholesterol and a succinic acid model linker. The conjugation reaction was tuned using the established PS-TPP/I₂/ImH activating system, which provided the desired compounds in high yields (94–96%) by a one-pot procedure. The substantial increase in the lipophilicity of 10a–b and 11a–b is supposed to improve internalization within the bacterial cell, thereby potentially leading to enhanced antimicrobial properties. However, assays are currently hampered by solubility problems; therefore, alternative administration strategies will need to be devised.     

Water availability affects nectar sugar production and insect visitation of the cup plant Silphium perfoliatum L. (Asteraceae)

The perennial cup plant (Silphium perfoliatum L.) is considered as an alternative feedstock to maize for biogas plants. Due to its ecological advantages of an extensive management and function as food resource for pollinators, it can be grown in Ecological Focus Areas (EFAs) since 2018. However, studies at the Julius Kühn-Institute in Braunschweig (Germany) showed that the assumed advantage of the cup plant of a high drought tolerance could not be confirmed regarding aspects of crop production and yield. We complemented this experiment by assessing how different soil moisture conditions affect the production of floral resources and insect visitation. In 2014, we sampled three irrigated and three rainfed plots of the cup plant. We quantified the nectar volume and sugar mass per inflorescence, the number of inflorescences per plant and calculated the total nectar sugar production. We further counted insect visitation on the inflorescences. Due to reduced numbers of inflorescences per plant and an earlier harvest, the estimated nectar sugar production was 58 kg/ha regarding irrigated and 20 kg/ha regarding rainfed plots. Honeybee visitation per inflorescence was about twice as high in the irrigated plots. Furthermore, the early harvest is a disadvantage for wild pollinators with a late activity period.     

Effects of no‐take area size and age of marine protected areas on fisheries yields: a meta‐analytical approach

Marine protected areas (MPAs) are often promoted as tools for biodiversity conservation as well as for fisheries management. Despite increasing evidence of their usefulness, questions remain regarding the optimal design of MPAs, in particular concerning their function as fisheries management tools, for which empirical studies are still lacking. Using 28 data sets from seven MPAs in Southern Europe, we developed a meta‐analytical approach to investigate the effects of protection on adjacent fisheries and asking how these effects are influenced by MPA size and age. Southern European MPAs showed clear effects on the surrounding fisheries, on the ‘catch per unit effort’ (CPUE) of target species, but especially on the CPUE of the marketable catch. These effects depended on the time of protection and on the size of the no‐take area. CPUE of both target species and the marketable catch increased gradually by 2–4% per year over a long time period (at least 30 years). The influence of the size of the no‐take area appeared to be more complex. The catch rates of the entire fishery in and around the MPA were higher when the no‐take areas were smaller. Conversely, catch rates of selected fisheries that were expected to benefit most from protection increased when the no‐take area was larger. Our results emphasize the importance of MPA size on its export functions and suggest that an adequate, often extended, time frame be used for the management and the evaluation of effectiveness of MPAs.     

Detection and characterization of a rhabdovirus causing mortality in black bullhead catfish,Ameiurus melas

This study fully describes a severe disease outbreak occurred in 2016 in black bullhead catfish farmed in Italy. Affected fish showed nervous clinical signs as well as emaciations and haemorrhagic petechiae on the skin at the fin bases, abdomen and gills. Viral isolation in cell culture allowed the subsequent identification of a rhabdovirus, tentatively named ictalurid rhabdovirus (IcRV), through electron microscopy, immunofluorescence and whole genome sequencing (WGS). The newly isolated virus, together with 14 additional viral strains stored in our repository and detected during similar mortality episodes in the period 1993–2016, was phylogenetically analysed on the basis of the nucleoprotein and the glycoprotein nucleotide and amino acid sequences. The genetic distances among Italian IcRV strains were also estimated. Our results show that all the IcRV strains belong to the genus Sprivivirus and are closely related to the tench rhabdovirus (TenRV). Italian catfish production is constantly decreasing, mainly due to viral infections, which include the newly characterized IcRV. Data presented in this work will assist to investigate the molecular epidemiology and the diffusive dynamics of this virus and to develop adequate surveillance activities.     

Guanine-cytosine contents of the host and symbiont cDNA in a symbiotic coral

ABSTRACT:   Hermatypic (reef-building) corals harbor dinoflagellate endo-symbionts Symbiodinium spp. In studying gene expression in such symbiotic corals, problems arise regarding how to distinguish the coral and symbiont mRNA, and how to estimate their fractions in the mRNA population of the holobiont (symbiotic complex of the coral and Symbiodinium cells). In this study, these issues were addressed using juveniles of hermatypic coral Acropora tenuis in symbiosis with Symbiodinium cells of strain PL-TS-1. First, the guanine-cytosine (GC) contents were determined in expressed sequence tags (EST) from PL-TS-1 cells cultured in vitro and symbiont-free larvae of A. tenuis , and their average GC contents were found to be significantly different. The average GC content of the EST from the holobiont was much closer to that of A. tenuis larvae, suggesting that the majority (>90%) of mRNA isolated from the holobiont originated in the host. In protein-coding sequences, little overlap was observed between the GC-content distributions of PL-TS-1 cells and A. tenuis larvae. All of the coding sequences ( n  = 59) found in the A. tenuis EST had GC contents below 0.5, whereas the GC content exceeded 0.5 in the majority (43/44) of coding sequences from the nuclear genome of PL-TS-1 cells.     

Strip-till as a means of decreasing spatial variability of winter barley within a field scale

The tillage system, which joins soil tillage, fertilisation, and seed sowing in one pass of a machine, is rarely used in cereal cultivation. This research aimed to study whether strip-till and conventional tillage (post-harvest ripping and mixing of stubble, ploughing, pre-sowing fertilisation, and seedbed preparation) differ in plant density, yield components, and grain yield of winter barley cultivated on Cambisol in a region with low rainfall, the annual average is about 500?mm. To reach this aim, a two-year, large-plot experiment was conducted in a production field. The soil within the field was spatially variable in texture, moisture, and chemical and biological properties, CV 2.3% do 29.6%. Strip-till had lower within-field spatial variability of winter barley grain yield than conventional tillage. The standard deviation was 0.36?t?ha^?1, 0.67?t?ha^?1 in the first year and 0.12?t?ha^?1, 0.30?t?ha^?1 in the second year, respectively. During the period of limited rainfall, strip-till had greater uniformity of plants after emergence; after the winter with low air temperature and a low amount of snow, it had greater plant density. Thus, strip-till can reduce variability of plants and their yield within a field, especially in adverse environmental conditions.