Plant and Bird Community Dynamics in Mixed-Grass Prairie Grazed by Native and Domestic Herbivores

Native colonial and large ungulate herbivores infrequently coexist on contemporary landscapes but frequently would have in the past, and understanding these interactions is important for conservation in working landscapes—those lands managed for biological and economic objectives. Although many factors contribute to grassland bird declines, consistent and long-term removal of native herbivores from western grasslands promotes homogenous landscapes that are now uniformly grazed by cattle (Bos taurus). This shift in grassland disturbance patterns limits habitat availability for specialized grassland species. We investigated vegetation and bird community dynamics in pastures grazed by domestic cattle and a native colonial herbivore, the black-tailed prairie dog (Cynomys ludovicianus). The study occurred in the northern mixed-grass prairie of the United States on four experimental pastures stratified by the proportion of prairie dog occupancy to create an ecological gradient. Vegetation and bird surveys were conducted from 2012 to 2015 on and off prairie dog colonies. Vegetation and bird communities were not different along the experimental pasture gradient but did differ relative to location on versus off town. Prairie dogs induced changes in the plant community with midstatured grasses like side-oats grama (Bouteloua curtipendula) and green needlegrass (Nassella viridula) being associated with off-colony sites while on-colony sites were associated with disturbance-tolerant species such as fetid marigold (Dyssodia papposa). The bird community responded to changes in vegetation structure resulting from prairie dogs with grasshopper sparrows (Ammodramus savannarum) being more abundant off colonies in areas with greater vegetation structure, while bird species with more complex life histories, such as the upland sandpiper (Bartramia longicauda), were associated with both on ? and off ? prairie dog colonies. Our findings demonstrate the importance of maintaining spatial heterogeneity in working landscapes and show that native colonial herbivores can help achieve this in the presence of herbivory by domestic cattle.     

Linkage disequilibrium and effective population size in Gir cattle selected for yearling weight

Linkage disequilibrium (LD) plays an important role in genomic selection and mapping of quantitative trait loci (QTL). This study investigated the pattern of LD and effective population size (N_e) in Gir cattle selected for yearling weight. For this purpose, 173 animals with imputed genotypes (from 18 animals genotyped with the Illumina BovineHD BeadChip and 155 animals genotyped with the Bovine LDv4 panel) were analysed. The LD was evaluated at distances of 25–50 kb, 50–100 kb, 100–500 kb and 0.5–1 Mb. The N_e was estimated based on 5 past generations. The r² values (a measure of LD) were, respectively, .35, .29, .18 and .032 for the distances evaluated. The LD estimates decreased with increasing distance of SNP pairs and LD persisted up to a distance of 100 kb (r² = .29). The N_e was greater in generations 4 and 5 (24 and 30 animals, respectively) and declined drastically after the last generation (12 animals). The results showed high levels of LD and low N_e, which were probably due to the loss of genetic variability as a consequence of the structure of the Gir population studied.     

Hepatic intranuclear glycogen inclusions in western barred bandicoots (Perameles bougainville).

The western barred bandicoot, Perameles bougainville, is an endangered Australian marsupial species. Routine histology of liver samples collected at necropsy from 19 of 20 (95%) western barred bandicoots revealed the sporadic to common occurrence of abnormal hepatocyte nuclei characterized by margination of chromatin and concomitant central pallor. Some abnormal hepatocyte nuclei were mildly to markedly enlarged and irregularly shaped. Periodic acid-Schiff reagent stained 131 of 142 (92%) of these abnormal hepatocyte nuclei. Positive staining was completely eliminated by diastase pretreatment. Transmission electron microscopy revealed that abnormal hepatocyte nuclei with marginated chromatin did not contain viral particles. Rather, glycogen beta-particles and alpha-rosettes were identified within some abnormal hepatocyte nuclei. Glycogen intranuclear inclusions were an incidental finding in western barred bandicoot hepatocytes.     

Oropharyngeal teratoma in a neonatal sable antelope (Hippotragus niger)

A neonatal male sable antelope (Hippotragus niger) was found dead. A 5 by 12-cm lobulated mass was present in the oral cavity, attached to the caudal border of the soft palate; this mass contained hair, cartilage, bone, nervous tissue, muscle, and multiple gland-like structures. Histopathologic diagnosis was consistent with oropharyngeal teratoma. As a result of the lack of wear of the fetal hooves, the firm, collapsed appearance of the lungs, and the lack of other gross or histopathologic abnormalities, the oropharyngeal tumor is suspected to have caused an airway obstruction, resulting in the calf's early postnatal death. This is the first report of an oropharyngeal teratoma in the veterinary literature.     

Eumycetoma and disseminated phaeohyphomycosis in a Sumatran tiger

A 16-y-old female Sumatran tiger (Panthera tigris sumatrae) was evaluated for hyporexia. Examination revealed chronic kidney disease and a large subcutaneous axillary mass with draining tracts that contained numerous small black grains. Histologic examination revealed the presence of intralesional fungal hyphae. Persistent hyporexia and pyogranulomatous disease, as well as progressive cachexia and azotemia occurred despite treatment, and euthanasia was performed. Disseminated phaeohyphomycosis was diagnosed on postmortem examination, additionally affecting various lymph nodes, the nasal cavity, mesenteric adipose tissue, abdominal aorta, pericardium, and kidney. Fungal culture from a deep-tissue sample isolated a pure growth of Curvularia sp., a dematiaceous opportunistic fungus able to cause eumycetomas and/or phaeohyphomycosis. Phaeohyphomycosis is a rare but emerging condition, not previously reported as disseminated disease in an exotic carnivore, to our knowledge. Aggressive systemic antifungal treatment was unsuccessful, likely complicated by diagnostic challenges and concurrent renal disease. The presence of a swelling with abundant grains exiting draining tracts should direct clinicians to the diagnosis of a mycetoma, warranting early and aggressive treatment.     

Soil Microbial Communities Reflect both Inherent Soil Properties and Management Practices in Wisconsin Potato Fields

Microbial communities in soils provide numerous functions vital to agricultural productivity, and there is growing interest in understanding and manipulating these communities to achieve more sustainable production systems. We investigated microbial communities in potato fields in Wisconsin to determine the extent to which microbial communities were structured by inherent soil properties versus factors under grower control. We found that soil properties, including texture and chemistry, shaped microbial communities at broad levels, determining the diversity and abundance of phyla. Organic versus conventional management, however, correlated with finer scale differences in microbial communities, while crop variety was not associated with microbial community composition in this study. These results suggest that grower practices have the potential to alter microbial communities, but these effects will take place within an existing soil context. Future research is necessary to determine how these patterns in microbial community structure relate to functional outcomes for plant health.     

Effect of the duration of inoculum exposure on development of citrus canker symptoms on seedlings of Swingle citrumelo

Citrus canker (Xanthomonas citri subsp. citri, Xcc) is one of the most serious diseases citrus in Florida, and elsewhere in the world. The disease causes yield loss and some fresh fruit trade restrictions may apply. Cultural management techniques such as windbreaks may work by not only reducing wind speed, but also reducing the period of exposure of susceptible foliage or fruit to those wind speeds that support infection from incoming inoculum. To investigate the effect of exposure period to inoculum of Xcc, seedlings of canker-susceptible Swingle citrumelo were exposed to sprayed inoculum for increasing periods at different wind speeds. The incidence and severity of citrus canker was assessed. In three experiments the incidence and severity of citrus canker most often increased with longer periods of exposure to inoculum, especially so at wind speeds of ≥16 m/s compared to wind speeds of ≤5 m/s (wind speed also increased disease incidence and severity). Regression analysis demonstrated relationships between period of exposure to inoculum and the percent infected leaves per plant, the number of lesions per plant, the number of lesions per infected leaf, and for the percent of infected leaves with lesions on the petioles at wind speeds of ≥16 m/s (R²?=?0.16–0.72). Due to the effect of inoculum exposure period and wind speed, attempts should be made to minimize exposure of canker-susceptible citrus when wind speed is highest and inoculum is available. Windbreaks should help minimize periods of exposure to splashed inoculum in high winds.     

Ontogenetic niche shifts in the American Alligator establish functional connectivity between aquatic systems

Individual animals undergoing ontogenetic shifts in habitat use may establish a mobile link between discrete ecosystems via movement of energy, nutrients and matter, as well as through impacts on ecosystem and habitat structure. The American Alligator (Alligator mississippiensis) is a model species for studying ecological implications of ontogenetic niche shifts, because they grow in size by several orders of magnitude, and they play a critical role as both top predators and ecosystem engineers. We used equal trapping effort, radio telemetry and nest surveys to document ontogenetic habitat shifts of alligators between hydrologically isolated, seasonal wetlands and riverine systems. To estimate the degree of functional connectivity between systems, we quantified alligator biomass and nutrient excretion in both systems. Seasonal wetlands provided nesting and nursery sites for adult females and juveniles, which constituted 0.78 g/m² biomass and excreted 0.05 g/m²/yr N, P, Ca, Mg, Na and K in that system. In contrast, the riverine system provided non-nesting habitat for adults and sub-adults of both sexes, totaling 0.18 g/m² biomass and excreting 0.01 g/m²/yr of nutrients. Furthermore, sub-adults and adult females were documented moving across the terrestrial matrix, while adult males spent the duration of the study in the creek. Our results demonstrated that ontogenetic niche shifts in alligators establish connectivity between seasonal wetlands and riverine systems and with the surrounding terrestrial matrix. These findings have implications for the definition of jurisdictional wetlands under the US Supreme Court’s 2001 SWANCC decision and highlight the importance of ecological, as well as hydrological, connectivity.