我国北方梨产区主栽品种病毒种类的鉴定研究

１９８８－１９９３年对梨树的病毒鉴定表明，我国北方梨产区１５个主栽品种的带病毒株率为８６．３％，其中梨环纹花叶病毒４４．３％、梨脉黄病毒６１．８％、　　矮化病毒１１．５％、苹果茎沟病毒３２．８％；国家梨种质资源圃（辽宁兴城）５个梨系统２３个主要品种的带病毒株率为６０．９％，其中梨环纹花叶病毒４１．３％、梨脉黄病毒５４．４％、矮化病毒２７．２％、苹果茎沟病毒３８．０％。研究显示，上述４种病毒与指示植物的最佳组合为杂种／梨脉黄病毒、Ａ２０／梨环纹花叶病毒、　　Ｃ７／１／矮化病毒、弗吉尼亚小苹果／苹果茎沟病毒。经鉴定证明，梨环纹花叶病毒与苹果褪绿叶斑病毒、梨脉黄病毒与苹果茎痘病毒分别为同一种病毒。     

高通量测序鉴定柑橘黄化脉明病毒诱导柠檬差异表达microRNA

 柑橘黄化脉明病毒(Citrus yellow vein clearing virus,CYVCV)是我国新发生的危害柠檬的重要病毒。本研究对接种和未接种CYVCV的柠檬叶片样品进行了高通量小RNA测序,以甜橙基因组作为参考,采用生物信息学软件进行miRNA鉴定和靶基因预测。结果显示CYVCV侵染对13个保守miRNA和12个新鉴定的非保守miRNA的表达具有调控作用,对这些差异表达miRNA的靶基因进行预测和功能分析的结果显示,保守miRNA的靶基因功能在植物逆境反应及光合作用和能量代谢相关通路中具有明显的富集现象,推测与CYVCV侵染柠檬植株及诱导病害症状表现有关,而多数新鉴定的非保守miRNA的靶基因功能未能注释到KEGG通路。采用实时荧光定量PCR对部分miRNA的表达水平进行了分析,结果表明miRNA的表达水平在接种CYVCV后30~90 d呈时间动态变化。研究结果为进一步揭示CYVCV与柠檬互作机制提供了重要信息。     

侵染梨的苹果茎痘病毒基因组序列及小RNA分析

苹果茎痘病毒(Apple stem pitting virus,ASPV)是危害梨(Pyrus spp.)和苹果(Malus spp.)的重要病毒。本研究采用小RNA深度测序技术获得了ASPV基因组的部分序列,在此基础上设计引物对该病毒基因组进行RT-PCR扩增,通过序列拼接得到1个来源于玉露香(Yuluxiang)梨的ASPV分离物(YLX)长度为9 291个核苷酸(nt)(不包括基因组5'末端约30个核苷酸)的基因组序列,该序列与已报道的13个ASPV分离物的基因组核苷酸序列相似性为71.6%~80.7%,与多个来自苹果的ASPV分离物系统进化关系较近。首次分析了来源于ASPV基因组的干扰性小RNA(siRNA),发现来源于ASPV基因组链和互补链的siRNA长度均以21 nt和22 nt为主,siRNA的5'端具有一定的碱基偏好性。本研究结果为深入了解ASPV的分子特性提供了重要信息。     

不同引物对检测柑桔黄龙病菌灵敏度比较

对目前常用的5对引物(fOI1/rOI2c、fOI2/r23S1、fA2/rJ5、fP535/rP535、fP400/rP400)检测柑桔黄龙病菌的灵敏度进行了比较。结果发现,不同引物对的检测灵敏度不同,5对引物检测灵敏度由高到低依次为:fP400/rP400>fP535/rP535>fA2/rJ5>fOI1/rOI2c>fOI2/r23S1;引物对fP400/rP400比广谱引物对fOI2/r23S1的灵敏度高近千倍。半巢式PCR及巢式PCR的检测灵敏度远高于常规PCR,可检测出接近极限浓度10-7ng/μL,二者没有明显的差别。因此,按照不同目的选择合适的检测引物非常重要,特别是当待测样品中的黄龙病菌浓度极低时,应选择高灵敏度的小片段特异性引物对。     

梨褪绿叶斑伴随病毒的RT-PCR和巢式RT-PCR检测技术建立

 梨褪绿叶斑伴随病毒(Pear chlorotic leaf spot-associated virus,PCLSaV)是新近发现的为害梨树的欧洲花楸环斑病毒属(Emaravirus)病毒,该病毒基因组由5条负义单链RNA组成。本研究比较分析了反转录引物pd(N)6、3C和5H及基于该病毒基因组RNA3和RNA5链序列设计的4对引物用于RT-PCR检测梨样品中PCLSaV的效果,结果显示,采用与该病毒基因组RNA链3′末端互补的引物3C用于cDNA合成及基于该病毒RNA5链序列的引物5-F/R用于PCR扩增时,检测PCLSaV的灵敏度相较采用引物pd(N)6和5H合成cDNA为模板时高10~100倍;不同部位和不同发病状况的梨树组织中PCLSaV检测结果差异明显。进一步建立了具有高灵敏度的巢式RT-PCR技术,采用外侧引物5-F/R和内巢引物5-IF/IR结合可用于梨不同组织样品中PCLSaV的检测。本研究为系统分析PCLSaV在我国栽培梨树上的危害状况及无病毒梨种质培育奠定了技术基础。     

柑橘衰退病毒检测试剂研制及其分子特性研究

柑橘衰退病毒(Citrus tristeza virus,CTV)广泛分布于世界各柑橘产区,其引起的衰退病是最具危害性的柑橘病害之一,该病毒主要通过蚜虫和带毒接穗传播.CTV存在明显的株系分化现象,除少数株系在许多柑橘品种上不产生可见症状外,大部分株系能在柑橘上产生明显症状,常见症状可分为三大类型,即速衰型、茎陷点型和苗黄型.速衰型症状主要表现在以酸橙作砧木的甜橙等感病柑橘上;茎陷点症状的发生与砧木种类无关,常导致葡萄柚或甜橙产量降低、品质下降、植株矮化;苗黄症状在田间很少发生,主要是在酸橙、来檬或葡萄柚的苗期引起严重褪绿和矮化.     

来源于新疆的3 个苹果褪绿叶斑病毒分离物的分子变异研究

Apple chlorotic leaf spot virus (ACLSV) isolates from Korla pear (KI-2), New pear no. 7 (XI-1) and Red Fuji apple (API-4) were collected from XinJiang and characterized by analyzing sequences of their near genomic 3忆-terminal. The RT-PCR products were cloned, and analyzed by single-strand conforma-tion polymorphism (SSCP). Eight out of 39 collected positive clones showing different SSCP patterns were sequenced. The results showed that the amplified products had sizes ranging 676 - 703 bp, including partial coat protein (CP) gene (506 bp, accounts for 87% of the complete cp gene) and 3忆-terminal non-coding re-gion (3忆NCR) sequences. The cp gene sequences from isolate KI-2 showed a high intra-isolate divergence,with 84. 8% - 85. 4% identities at the nucleotide (nt) level, and the intra-isolate identities were 99. 8 % and 92.5% - 99. 8 % for isolate XI-1 and API-4, respectively. Phylogenetic analysis on the nt sequences of cpgene showed that the analyzed ACLSV variants from three isolates fell into two different clusters. A variant KI-2-6 from KI-2 was clustered into a group with an apple isolate aclsv-c from China and a plum isolated from France, and all other variants fell into a large cluster. The 3忆NCR sequences of these variants were identical ranging 80. 6% - 100 % .     

中国果树类病毒的发生及其研究进展(英文)

概述了在中国发生且己鉴定明确的5种果树类病毒,即苹果绣果类病毒(Apple scar skin viroid,ASSVd)、梨泡状溃疡类病毒(Pear blister canker viroid,PBCVd)、葡萄黄斑类病毒-1(Grapevine yellow speckle viroid-1,GYSVd-1)、柑橘裂皮类病毒(Citrus exocortis viroid,CEVd)和桃潜隐花叶类病毒(Peachlatent mosaic viroid,PLMVd)的研究进展,包括病害的首次发现、症状特征、发病规律、检测方法与防治对策以及这些类病毒的生物学与分子生物学特性。     

芋花叶病毒的RT-PCR检测及外壳蛋白基因序列分析

 采用RT-PCR技术对采自中国湖北、浙江和山东的91份芋[Colocasia esculenta（L.）Schott]样品的芋花叶病毒（Dasheen mosaic virus,DsMV）进行了检测,检出率为26.4%。对其中14个DsMV分离物的317 bp扩增产物（为外壳蛋白基因的一部分）序列分析的结果显示,各分离物内的核苷酸变异相对较低,而分离物间存在较大的分子变异,相似性为68.3% ~ 97.8%。对来自湖北和浙江的2个DsMV分离物DsMV-SCS和DsMV-JH的外壳蛋白基因（coat protein gene,cp）进行了测序,全长分别为951 bp和987 bp,二者cp核苷酸和氨基酸序列相似性分别为79.0%和82.3%,与已报道DsMV的cp核苷酸和氨基酸序列相似性分别为73.0% ~ 92.1%和74.8% ~ 98.2%,在构建的系统发育树上聚在两个不同的簇,各DsMV分离物的系统进化关系与其寄主和地理来源无显著相关性。     

梨和苹果腐烂病菌不同培养表型菌株的致病性分析

The pathogenicity of three strains (F-SD-8, F-BJ-2c-2 and F-HN-2a-1) of Valsa mali var. pyri causing pear canker and one strain (F-SX-A6) of V. mali var. mali causing apple canker in China were comparatively tested by wound inoculation on in vitro twigs of pear, apple and some other woody plants, and in vivo twigs of pear. Significant pathogenicity differentiation was detected in V. mali var. pyri. Generally strains F-SD-8 and F-BJ-2c-2 were highly pathogenic on pear although their culturing characteristics differed greatly. The strain F-SX-A6 was more aggressive on apple than on pear, and the strain F-HN-2a-1 showed significant lower pathogenicity on ten pear cultivars and other seven species of woody plants. Our results confirmed that two variants of V. mali had host preference and were also aggressive to crabapple, apricot, and peach besides apple and pear. Meanwhile, strains F-SD-8 and F-BJ-2c-2 could induce the formation of pycnidia on in vivo twigs of pear, which was not observed on in vivo twigs inoculated with F-HN-2a-1 and F-SX-A6.