Determinants of the biodiversity patterns of ammonia-oxidizing archaea community in two contrasting forest stands

Purpose

The variation in soil microbial community patterns is primarily influenced by ecological processes associated with spatial distance and environmental heterogeneities. However, the relative importance of these processes in determining the patterns of soil microbial biodiversity in different successional forests remains unclear.

Materials and methods

Based on the species data from denaturing gradient gel electrophoresis (DGGE) analysis, we described the composition and beta diversity of ammonia-oxidizing archaea (AOA) community, an important functional microbial group in regulating nitrogen cycle, in a middle-succeed stand (60 years of secondary succession) and an undisturbed native stand in a subtropical forest in southern China. The composition pattern was examined using a multi-response permutation procedure (MRPP), and the beta diversity was described using the Sørensen index. The relative influence of edaphic, vegetational, spatial, and topographical factors on AOA composition and beta diversity was assessed by variation partitioning and multiple regression on distance matrices (MRM), respectively.

Results and discussion

We did not find any stand-specific patterns in AOA community composition in the two stands; however, the influential variables were different between the two stands; 7.3 and 4.5 % of the total variation in AOA community composition could be explained by edaphic (i.e., available potassium and total phosphorus) and spatial variables, respectively, in the middle-succeed stand, while 3.7 and 2.8 % of the variation were explained by spatial variable and available phosphorus, respectively, in the native stand. Soil total phosphorus influenced the beta diversity of AOA community most in the middle-succeed stand, while genetic distance of tree species was found to be the most important factor in driving the beta diversity pattern in the native stand.

Conclusions

Soil nutrients influenced the beta diversity of AOA community in the middle-succeed stand more than that in the native stand, while vegetation is more important in the native stand. The substantial unexplained variations were possibly due to the effects of other unmeasured variables. Nevertheless, dispersal process is more important in controlling AOA community composition in the native stand, while processes associated with environmental heterogeneities are more important in the middle-succeed stand in this subtropical forest.

     

有益元素对水稻种子萌发的生理效应

将水稻种子浸于从0到10mg·L-1不同浓度梯度的亚硒酸钠溶液中,对其生理指标进行测量可溶性糖含量、呼吸强度及发芽率等.结果表明在低浓度亚硒酸钠溶液浸种的前提下,亚硒酸钠对以上各项生理指标均有促进作用,而高浓度亚硒酸钠溶液浸种,表现出较大抑制作用,同时.由于植物体内复杂多样的同功酶系统的存在,在一定范围内对亚硒酸钠的毒害作用有某种程度的适应与调节能力.     

Evaluation of genetic and non-genetic factors on foot and mouth disease (FMD) virus vaccine-elicited immune response in Hardhenu (<Emphasis Type="Italic">Bos taurus</Emphasis> x <Emphasis Type="Italic">Bos indicus</Emphasis>) cattle

Foot and mouth disease (FMD) is the most contagious disease of mammals and a major threat to animal husbandry sector. In India, vaccination with the inactivated trivalent (O, A and Asia1) vaccine is one proven way for protecting the livestock from FMD. However, many outbreaks have been reported in different parts of the country. Therefore, present study was aimed at elucidating the effects of genetic and non-genetic factors on FMD viral vaccine-elicited immune response in Hardhenu cattle. The effect of season of vaccination was not consistent. The effect of status of animal was significant for all the pre and post AB titres except for pre AB titre of serotype O and post AB titre of Asia1.The estimates of heritability for response to vaccination were low to high ranging from 0.11 to 0.45. The highest heritability estimate was obtained for serotype O and the lowest for Asia1. The heritability estimates for pre and post AB titres ranged from 0.15 to 0.33. All the pre and post AB titres and responses to vaccination had genetic correlations ranged from high negative to high positive among them. Results of this study highlight the variation in vaccine response which needs to be further exploited on large-scale animal data for better immunization and protection against highly contagious viral vesicular disease of cloven-hoofed animals.     

Achieving food and nutritional security through agroforestry: a case of <Emphasis Type="Italic">Faidherbia albida</Emphasis> in sub-Saharan Africa

Faidherbia albida is an ideal agroforestry tree commonly intercropped with annual crops like millet and groundnuts in the dry and densely populated areas of Africa. With its peculiar reverse phenology, it makes growth demands at a different time from that of crops. In addition, it deposits great amount of organic fertilizer on food crops. Leaves entering soils are comparable to fertilization of almost 50 t·ha 1 ·year 1 of manure in dense stands of 50 large trees per ha. These nutrients help maximize agricultural production and reduce the need for a fallow period on poorer soils. Research has shown that millet grown under F. albida yielded 2.5 and 3.4 fold increases in grain and protein, respectively. Animals eat pods which contain mean amounts of crude protein of 20.63% and carbohydrate of 40.1% in seeds. Moreover, the continued existence of F. albida in agroforestry parklands as in Ethiopia and Mali signifies the success of traditional conservation measures. Modern scientists have also developed much interest in the role of agroforestry in maintaining long-term biological balance between agriculture and livestock production systems. To ensure food security, which still remains a major challenge in sub-Saharan Africa, and concurrently minimize environmental degradation, promotion of agroforestry that specifically involves indigenous trees is crucial. We discuss the prospective role of F. albida in alleviating poverty while simultaneously protecting the environment from factors associated with, for example, deforestation and loss of biodiversity. The overall aim is to promote wide-scale adoption of F. albida as a valuable tree crop in farming systems, particularly in those areas where it remains unexploited.     

Drivers of adoption of eucalypt tree farming by smallholders in Thailand

Eucalypt (Eucalyptus spp.) tree farming is a source of income for many smallholders in developing and emerging countries and critical to the resource supply of many pulp and paper companies. These companies rely on smallholders adopting tree farming, sometimes by offering a contract. This paper reports a study from four regions of Thailand, where smallholder eucalypt tree farming is important, which investigated what characteristics of smallholders were associated with greater adoption of tree farming. A total of 461 eucalypt tree farmers and 171 non-tree farmers were randomly selected and surveyed in these regions, using a door-to-door household survey. A logit analysis corroborated hypotheses about the drivers of adoption. Qualitative analyses were used to inform interpretation of the quantitative results and shed light on the role of eucalypt tree farming in smallholders’ livelihood. Results demonstrate that those with suitable land available are more likely to adopt eucalypt tree farming than others. In addition, perception of land tenure security matters in the adoption of tree growing, but holding a formal land tenure document does not. Adoption of eucalypt tree farming in Thailand is not part of a land use intensification strategy. Instead, eucalypts are used as an alternative crop for low productivity land, on which eucalypts are the most profitable crop. Eucalypt tree farming also gives smallholders an opportunity to diversify their income. In addition, this alternative land use has the advantage of requiring low labour inputs between planting and harvest. This is particularly advantageous for many tree growers who have off-farm income or rely on hired labour for farming their land.     

Avian predation on wild and cultured sea urchin <Emphasis Type="Italic">Strongylocentrotus intermedius</Emphasis> in a rocky shore habitat

ABSTRACT:   The present study reports the annual variation in consumption of the sea urchin Strongylocentrotus intermedius by avian predators on a rocky shore where the culture of sea urchins has been conducted. Carrion crow and a few gull species were the most abundant avian predators and consumed a large number of sea urchins. Crows consumed mostly natural sea urchins, approximately 36 kg ww/ha per year on the intertidal rocky bench, but the gull species consumed mostly cultured sea urchins, approximately 100 kg ww/ha per year in the culture area. The seasonal variation in the amount of sea urchins consumed by crows was higher than that by the gull species, presumably because of the difference in foraging behavior in association with the seasonal tidal cycle. The natural sea urchins consumed are an allochthonous input from the subtidal to the intertidal habitat, and thus, crow predation may not affect the natural and the cultured populations of the sea urchin. The gull species consumed much of the cultured sea urchin, and thus, may be regarded as an effective predator causing damage to sea urchin culture. The results suggest that further studies are needed to determine why the gull species selectively feed on cultured sea urchins.     

皖西南春棉田主要害虫和天敌种群时序动态格局

为探索直播春棉田害虫与其天敌之间的相互作用和竞争共存机制,采用直接观察法,系统研究了棉田主要害虫和天敌种群的时间动态变化,及其生态位宽度和生态位重叠值。研究结果表明,在直播春棉的不同生育期,棉田害虫和天敌的优势种不同。主要害虫和天敌的发生高峰期多集中在6—7月,而棉蚜高峰期在5月下旬,棉叶蝉高峰期在9月下旬。不同种群的时间生态位不同,害虫中棉盲蝽的生态位宽度最大,其次是棉铃虫,棉叶蝉和棉叶螨的生态位宽度较小;天敌中蜘蛛类天敌的生态位宽度最大,其次是小花蝽,黑襟毛瓢虫的生态位宽度最小。而黑襟毛瓢虫和瓢虫类天敌与棉蚜、棉叶螨生态位重叠度较大。因此,皖西南棉区直播春棉田可利用瓢虫类天敌抑制棉蚜和棉叶螨的危害,保护并利用好蜘蛛类天敌,需重点防治棉盲蝽和棉铃虫。     

A 192bp allele at the <Emphasis Type="Italic">Xgwm261</Emphasis> locus is not always associated with the <Emphasis Type="Italic">Rht8</Emphasis> dwarfing gene in wheat (<Emphasis Type="Italic">Triticum aestivum</Emphasis> L.)

The height-reducing gene Rht8 was introduced into Italian wheats by breeder Nazareno Strampelli from the Japanese landrace Akakomugi, and has been widely used in wheats adapted to southern and eastern European conditions. Following identification of a close linkage to Rht8, microsatellite marker Gwm261 has been used extensively to screen large numbers of diverse international germplasm. A 192bp allele at this locus has been taken as “diagnostic” for Rht8 and used to infer the international distribution of Rht8. In this paper, we report several instances of cultivars and mapping populations that vary for the presence of the 192bp allele at the Xgwm261 locus (Xgwm261 ₁₉₂ ), but with no associated reduction in height, suggesting a lack of association with Rht8. For instance, in the population derived from a cross between Sunco (Rht-B1b, Xgwm261 ₁₆₅ ) and Tasman (Rht-D1b, Xgwm261 ₁₉₂ ), there were significant height differences associated with the segregation of Rht-B1b and Rht-D1b, but no height differences between Xgwm261 genotypes. Similar results were obtained in a population derived from the cross between Molineux (Rht-B1b, Xgwm261 ₁₉₂ ) and Trident (Rht-D1b Xgwm261 ₂₀₈ ). In contrast, the cross between Trident and Chuanmai 18 (Xgwm261 ₁₉₂ ) gave significant height effects at both the Rht-D1 and Xgwm261 loci, with no epistatic interaction between loci. Chuanmai 18 is closely related to the Strampelli wheat Mara (ancestrally derived from Akakomugi) and is therefore likely to carry Rht8. The old Japanese cultivar Norin 10, used by Norman Borlaug to introduce Rht-B1b and Rht-D1b into Mexican wheats, also has a 192bp allele at the Xgwm261 locus, and the sequence of the amplified product is identical to that of Akakomugi. We suggest that the widespread use of Norin 10-derived germplasm during and after the Green Revolution introduced a second haplotype into international germplasm, in which Xgwm261 ₁₉₂ has no association with Rht8. Therefore, the presence of Xgwm261 ₁₉₂ is only indicative of Rht8 in wheat cultivars that have inherited this allele from Akakomugi or a Strampelli wheat ancestor.     

The Algorithm of Searching out the Least and Most Loops by Making Use of Direction Factor

Based upon the conception of the least loop,the most loop and direction factor presented by the author firstly,the algorithm of searching out the least and most loops has been designed.By building the adjoining matrix, confirming the start-point of searching,vectorizing the searching sides,calculating the direction factor of adjoining sides,we can search out the next side of the least loop or the most loop rapidly.With a valid searching side being confirmed at every searching and the searching scope being reduced by forming degenerate graph,the time compexity of the algorithm is much less. In the research of the automatic calculating system of construction quantities, the problem of houses partition and out-wall partition had been solved succesfully by utilizing this searching algorithm.