Calculation of CFP and verification of effect on CO2 emission reduction for the use of certified wood in Kyoto Prefecture

The representative carbon footprint of product (CFP) value of “certified wood in Kyoto Prefecture” was calculated as 241?kg-CO₂/m³. The CFP value was 158?kg-CO₂/m³ when wood was not kiln dried and final processing was not involved, whereas that of “kiln-dried, finished wood” was 284?kg-CO₂/m³. Comparisons of different types of wood were also conducted to examine CO₂ emission-reducing effects of “certified wood in Kyoto Prefecture”. We compared the CFP of lumber produced (in Japan) from logs supplied from Japan and other countries and that of “certified wood in Kyoto Prefecture”; the lumber products as a target for comparison are shipped to markets throughout the country. The CFP of “certified wood in Kyoto Prefecture” was approximately 50% lower compared to that of North American wood lumbered in Japan and shipped to markets throughout the country, and about 30% lower compared to the mean CFP of lumber produced (in Japan) from logs supplied from Japan and other countries and shipped to markets throughout the country. We then compared the CFP of “products imported from other countries after being cut into lumber” to that of “certified wood in Kyoto Prefecture”. The CFPs of lumber products from North America and Europe were lower than that of “certified wood in Kyoto Prefecture” (kiln-dried, finished wood). However, when only woodchips were used as a heat source in the process of kiln drying, the CFP of “certified wood in Kyoto Prefecture” was lower than any other kiln-dried lumber products. Regarding “certified wood in Kyoto Prefecture”, the use of woodchips as a heat source in the process of kiln drying or a shift to air drying decreases the CFP.     

Kujigamberol, a new dinorlabdane diterpenoid isolated from 85million years old Kuji amber using a biotechnological assay

A new compound, 15,20-dinor-5,7,9-labdatriene-18-ol (1), named kujigamberol, was isolated from amber, fossilized tree resin from the Kuji area in Japan, has been dated as being 85 million years old (late Cretaceous). Kujigamberol was identified using the hypersensitive mutant yeast (zds1? erg3? pdr1? pdr3?) with respect to Ca²⁺-signal transduction. The structure was elucidated on the basis of spectroscopic analysis including 1D NMR, 2D NMR and HR-EI-MS. It was different from known diterpenoids with a similar activity isolated from Baltic amber (agathic acid 15-monomethyl ester (2), dehydroabietic acid (3) and pimaric acid (4)). Kujigamberol showed glycogen synthase kinase-3β (GSK-3β) inhibition activity involving the growth restored activity against the mutant yeast and was cytotoxic to HL60 cells (IC₅₀ = 19.6 μM).     

Predicting the price of Vietnamese shrimp products exported to the US market using machine learning

Accurately predicting the price of exported fishery products is an important task for fisheries because it will enable market trends to be determined, leading to the development of high-quality fishery products. In this study, we predicted prices in selected base periods (2, 3, 6, and 12 months) to investigate how historical data influenced the Vietnamese export price. A dataset (from May 1995 to May 2019) was collected from the US Department of Agriculture (USDA). We initially hypothesized that the dependent variable, Vietnamese export price, was affected by 33 independent variables, but ultimately used 15 key variables, which were chosen on the basis of Akaike information criterion (AIC) to train the models. A tree-based machine learning technique, including the random forest and gradient boosting tree algorithms, was applied for predictions. It was found that the random forest algorithm performed well for historical data for periods of more than 6 months, while the gradient boosting tree algorithm was better over short durations of less than 6 months.

     

Isolation and characterization of a novel simazine-degrading beta-proteobacterium and detection of genes encoding s-triazine-degrading enzymes

A moderately persistent herbicide, simazine, has been used globally and detected as a contaminant in soil and water. The authors have isolated a simazine-degrading bacterium from a simazine-degrading bacterial consortium that was enriched using charcoal as a microhabitat. The isolate, strain CDB21, was gram-negative, rod-shaped (0.5-0.6 microm x 1.0-1.2 microm) and motile by means of a single polar flagellum. Based on 16S rRNA sequence analysis, strain CDB21 was identified as a novel beta-proteobacterium exhibiting 100% sequence identity with the uncultured bacterium HOClCi25 (GenBank accession number AY328574). PCR using primers that were specific for the genes of the atrazine-degrading enzymes (atzABCDEF) of Pseudomonas sp. strain ADP showed that strain CDB21 also possessed the entire set of genes of these enzymes. Nucleotide sequences of the atzCDEF genes of strain CDB21 were 100% identical to those of Pseudomonas sp. strain ADP. Sequence identity of the atzA genes between these bacteria was 99.7%. The 398-nucleotide upstream fragment of the atzB gene of strain CDB21 was 100% identical to ORF30 of Pseudomonas sp. strain ADP, and the 1526-nucleotide downstream fragment showed 99.8% sequence similarity to the atzB gene of the pseudomonad.     

Geographical distribution of vampire bat-related cattle rabies in Brazil

Seventy-seven rabies virus (RV) isolates originating from Brazilian cattle were genetically characterized. Partial nucleoprotein gene sequences of these isolates were phylogenetically and geographically analyzed. Cattle isolates, which clustered with the vampire bat-related RV group, were further subdivided into nine genetic subgroups. These subgroups were distributed widely in lowland regions, with some subgroups separated from each other by mountain ranges. In addition, separation of the groups in mountainous regions was correlated with altitude. These results indicate that cattle rabies is derived from several regionally-defined variants, which suggests that its geographical distribution is related to that of the vampire bat population.     

Application of buccal mucosal graft to establish a new urination passage in male cats with penile traumatic injury

Two male cats were presented with penile part of urethra injury due to dog attacks to the perineum and genitalia area. Chronic wound around a remained penile part of urethra due to the dog bite and perineal area was evident due to urine irritation. The buccal mucosa was harvested and subsequently placed on the granulation tissue of the wound to reconstruct the urinary passage. The buccal mucosal graft completely attached to the skin and urethra without any complications. From the follow-up at 3 months, the cats were able to urinate normally and the skin irritation from urine was resolved. In summary, the buccal mucosa is a good graft source and is suitable for the reconstruction of the urinary passage in severe and complicated cases of penile part of urethra injury in male cats.     

Evaluation of bovine uterine gland functions in 2D and 3D culture system

In ruminants, uterine glands play key roles in the establishment of pregnancy by secreting various factors into the uterine lumen. Although a three-dimensional (3D) culture system has been used for investigating cellular functions in vitro, the detailed functions of uterine gland have not been fully elucidated. In this study, we examined the benefits of 3D culture system to examine the innate functions of bovine uterine glands. Isolated bovine uterine glands were cultured on Matrigel (2D) or in Matrigel (3D), respectively, and the mRNA levels of secreted proteins (SERPINA14, MEP1B, APOA1, ARSA, CTGF, and SPP1) were measured in isolated and cultured uterine glands. The protein expression of estrogen receptor β (ERβ) and progesterone receptor (PR) and the establishment of apico-basal polarity were examined. In isolated uterine glands, the mRNA levels of secreted proteins changed during the estrous cycle. Although uterine glands cultured in both 2D and 3D expressed ERβ and PR, progesterone did not affect SERPINA14 mRNA expression. The expression of APOA1 mRNA in 2D cultured uterine glands did not respond to estrogen and progesterone. Additionally, the mRNA levels of secreted proteins in the 3D culture system were significantly higher than those in the 2D culture system, which might be attributed to the different cellular morphology between them. The locations of ZO-1 and β-catenin in 2D cultured uterine glands were disordered compared with 3D cultured uterine glands. These results showed that the hormonal responsiveness of secreted factor expression and cellular morphology were different between 2D and 3D cultured bovine uterine glands.     

Structural insights into the interaction between gabazine (SR-95531) and Laodelphax striatellus GABA receptors

γ-Aminobutyric acid receptors (GABARs) mediate fast inhibitory neurotransmission and are targets for insecticides. GABARs are composed of five subunits, the composition of which dictates the pharmacological characteristics of GABARs. Both competitive and noncompetitive GABAR antagonists can be used as insecticides. Gabazine is a potent competitive antagonist of mammalian α1β2γ2 GABARs; however, it is less potent against insect GABARs. To explore how gabazine interacts with GABARs, we examined whether the sensitivity of the small brown planthopper (Laodelphax striatellus) RDL GABAR (LsRDLR) to gabazine is increased when its amino acid residues are substituted with α1β2γ2 GABAR residues. In the results, two of the generated mutants showed enhanced gabazine sensitivity. Docking simulations of gabazine using LsRDLR homology models and an α1β2γ2 GABAR cryo-EM structure revealed that the accommodation of gabazine into the “aromatic box” in the orthosteric site lowered the binding energy. This information may help in designing GABAR-targeting insecticides with novel modes of action.