Assessment of biochemical and antioxidant diversities in a shallot germplasm collection from Vietnam and its surrounding countries

The shallot is considered an important genetic resource for Allium breeding programs because, compared to the bulb onion, the shallot contains higher levels of several functional chemical compounds. However, there may be differences in content, composition and beneficial activity among shallot landraces. This study was carried out to characterize the differences in phenolic, quercetin, sugar, S-alk(en)yl-l-cystein sulfoxide (ACSO), and saponin contents and antioxidant capacities of a shallot germplasm including 31 strains derived from different regions of Vietnam and six other countries. A wide variation was observed in the quantitative analyses of the chemical contents. Shallots with high contents of polyphenols, saponins, and quercetins were found in the south of Vietnam and other low-latitude countries. Meanwhile, those possessing fairly high ACSO and sugar contents were observed in the north of Vietnam. Qualitative analysis of saponins via thin layer chromatography did not show clear variation among shallot strains, but polymorphism was observed between the shallot and other Allium species, such as A. roylei. The principal component analysis could clearly discriminate shallot strains by their geographical origins. All shallot strains showed potent antioxidant activities in a DPPH assay. The highest antioxidant capacity was in the strains possessing relatively high contents of polyphenol, quercetin, and saponin. Significant correlations were found between antioxidant capacity (IC ₅₀ ^?1 ) and four groups of chemical compounds (polyphenols, quercetins, saponins, and ACSOs) (r = 0.40–0.59). A strong correlation was observed between IC ₅₀ ^?1 and quercetin contents (r = 0.59, p < 0.01). The six Fusarium-inoculated shallot strains seemed to be adequately resistant against disease, and the levels of resistance may be related to the saponin content in the bulb tissues.     

Comparison of phospholipid fatty acid composition in percolating water,floodwater, and the plow layer soil during the rice cultivation period in a Japanese paddy field

Azolla has been used as a green manure for rice in Vietnam and southern China (3). Recently it was adopted by farmers in the Koronadal area in South Cotabato Province, the Philippines (2). In that area Azolla pinnata grows reasonably well without phosphate fertilizer, which is generally used for stimulating Azolla growth (3, 5).     

Optimal periods of night‐time lighting in the sea cage culture of Pacific bluefin tuna,Thunnus orientalis,juvenile (Temminck and Schlegel)

We have previously reported that night‐time lighting prevents the mass death of Pacific bluefin tuna (PBT) juvenile due to collision and/or contact with the walls of sea cages, immediately after transfer to the cages, and that night‐time lighting does not negatively impact fish stress levels. However, the period of night‐time lighting should be limited to minimize negative impacts on the surrounding environment and aid management. Therefore, we investigated the optimal period of night‐time lighting by evaluating the whole‐body cortisol and glucose levels as stress parameters, growth performance and survival of PBT juvenile in four cages with different periods of night‐time lighting (i.e. unlit, 4‐day, 8‐day and 12‐day lighting). The results showed that almost all fish were died 1 day after transfer to the unlit cage. In comparison, the other groups (4‐day, 8‐day and 12‐day lighting) had high survival rates (92.5–96.0%) without significant difference. However, in the 4‐day‐lighting group, an obvious stress response was recorded on day 5, and growth performance was significantly lower. In the 8‐day‐lighting group, whole‐body cortisol levels were slightly elevated on day 9; however, significantly elevation was not recorded on day 12. These results indicate that the recommended lighting period of night‐time lighting in sea cages is 8–12 days.     

Control of dissolved oxygen levels of water in net pens for fish farming by a microscopic bubble generating system

ABSTRACT:   A microscopic bubble generating system (MBGS) has been developed to control dissolved oxygen (DO) levels suitable for fish farming. The MBGS has been tested to confirm its capability in net pens. Water conditions in a fish farm were monitored every two hours from June to October 2004 by setting an online vertical profiling system (OVPS) close to the net pen. DO in the net pen water decreased to physiologically stressful levels for the fish during the night (4.84–5.51 mg/L), while the DO was kept in saturated conditions during the day, due to oxygen supply from phytoplankton. The MBGS was operated from the evening to the morning of the next day for 16 h, to successfully create DO-saturated conditions in the net pen water at night. By using microscopic bubbles during the warm seasons, DO levels in the net pen water could be improved to a level suitable for fish farming. However, the low DO levels (<5.0 mg/L) of the bottom water occasionally extended to the net pen layers, despite the supply of microscopic bubbles to the water. To maintain the DO of the net pen water at levels suitable for fish farming, DO supply to the net pen water and the bottom water needs to be increased, and the organically enriched sediment just below the net pens needs to be treated.     

Promotion of initial swimbladder inflation in Pacific bluefin tuna,Thunnus orientalis (Temminck and Schlegel), larvae

Initial swimbladder inflation (ISI) of Pacific bluefin tuna (PBT), Thunnus orientalis, larvae was studied to increase the survival of cultured larvae. Experiment 1 was conducted to explore promotion and inhibition of ISI under different water surface conditions; including the use of surface skimmer to remove autogenous surface substances (SS), covering the water surface with liquid‐paraffin‐layer (LP) and oil film (OF), and a control (non‐treatment, NT). Significantly higher inflation frequency was observed in SS (62.2%) than NT (11.9%), LP (2.7%) and OF (3.9%). This indicates that ISI in PBT larvae can be promoted by removal of surface substances on rearing water which inhibit larval air gulping. Experiment 2 aimed to elucidate proper day of larval age to start skimming for promoting ISI with four different periods of oil film removal: from 3 to 8 (SF3D), 4 to 8 (SF4D), 5 to 8 (SF5D), 6 to 8 (SF6D) days‐post‐hatch (dph). Significant improvement in ISI frequency was observed in SF3D (80.2%) but the frequency was very poor in SF4D, SF5D, and SF6D (17.8–7.5%). This implies the need of oil film removal without missing a narrow window, 1 day of 3 dph, to promote ISI in practical PBT larviculture.     

Growth of larval and early juvenile Japanese anchovy, Engraulis japonicus, in the Kuroshio-Oyashio transition region

Larvae, juveniles, and adults of Japanese anchovy, Engraulis japonicus , were distributed throughout the Kuroshio-Oyashio transition region off northern Japan as far offshore as 170°E in 1996 and 1997. The growth trajectories of individual larvae and early juveniles were backcalculated using the biological intercept method based on the allometric relationship between otolith radius and somatic length. Mean larval growth rates ranged from 0.49 to 0.71 mm day^–1 in the transition region, and were comparable to those reported from the Pacific coastal waters of central Japan, which is the principal distribution range of E. japonicus . In terms of growth, the Kuroshio-Oyashio transition region seemed to be a favourable nursery area for larval E. japonicus . Larval growth tended to decline from the inshore to the offshore waters in the transition region. Thermal conditions did not show an inshore–offshore trend in the survey area and did not explain the longitudinal trend in growth rates.     

Assemblages of vertical migratory mesopelagic fish in the transitional region of the western North Pacific

Assemblages of vertical migratory mesopelagic fish are described for the nighttime upper 20 m layer of the transitional and adjacent waters in the western North Pacific. Twenty-three mesopelagic fish species belonging to six families and 16 genera were collected during June 1996. Family Myctophidae was most speciose, represented by 17 species, followed by Sternoptychidae (two spp.) and Bathylagidae (one spp.). Six assemblages are recognized based on their species composition: Subarctic, Northern Transition, Southern Transition, Subtropical, Slope Water and Seamount Assemblages. These assemblages are also characterized by size composition and biomass of the catches. The distributions of the Subarctic, Northern Transition, Southern Transition and Subtropical Assemblages are approximately defined by the Kuroshio and Oyashio fronts and the Subarctic Boundary. Slope Water and Seamount Assemblages are closely related to the slope water around the shelf edge off Japan and waters around the Shatsky Rise and the Emperor Seamount chain, respectively. The importance of the Southern Transition Assemblage area between the Kuroshio front and Subarctic Boundary as spawning and nursery grounds of many subarctic, transitional and subtropical fishes is elucidated, based on the geographical distribution patterns of their larvae and juveniles.     

Deep phylogeographic break among white croaker Pennahia argentata (Sciaenidae, Perciformes) populations in North-western Pacific

Abstract:   The Quaternary cold periods in the North-western Pacific are thought to have greatly influenced the genetic structures of marine species. One hundred and thirty-two individuals of white croaker Pennahia argentata were sampled from 12 localities throughout its distribution range to estimate the demographic history and genetic structure based on mitochondrial DNA cytochrome b gene and control region sequences. Two distinct clades with net genetic divergence of 3% in the control region were detected, one in Chinese coastal waters and the other in Japanese coastal waters. These clades may have been isolated and diverged during Pleistocene low sea levels. Nucleotide diversity was much higher in the Chinese clade than in the Japanese clade. The demographic history of the two clades was examined using neutrality tests and mismatch analyses, and the results indicated Pleistocene population expansion in both clades. Molecular variance and pairwise F _ST analyses revealed significant differentiation between two Japanese populations and lack of genetic structure in the Chinese populations. The significant geographic structure in white croaker suggests a low level of dispersal in this species. The lack of phylogeographic structure in Chinese coastal waters may reflect a recent range expansion after the last glacial maximum and insufficient time to attain migration-drift equilibrium.