Comparative evaluation of different therapeutic protocols for contagious caprine pleuropneumonia in Himalayan Pashmina goats

Tropical Animal Health and Production - Therapeutic management of contagious caprine pleuroneumonia (CCPP) involves mostly the use of oxytetracycline followed by enrofloxacin and rarely tylosin. In...     

Assessment of genetic diversity in common bean (Phaseolus vulgaris L.) germplasm using amplified fragment length polymorphism (AFLP)

AFLP technique was applied to assess genetic diversity among 44 common bean accessions that included 6 exotic accessions, 15 Indian land races and 23 released varieties. Eight AFLP primer pairs were used that produced 820 products of which 698 were polymorphic (85.12%). Wide variations were observed among all the accessions for the number of amplification products, percent polymorphism and average polymorphism information content (PIC). The Jaccard's similarity indices (J) based on the AFLP profiles were subjected to UPGMA cluster analysis. The dendrogram generated revealed seven major groups. Seventeen out of 23 released varieties were restricted to clusters VI and VII. The value of r = 0.934 in Mantel's test for cophenetic corrlelation applied to the cluster analysis indicated the high fitness of the accessions to a group. The germplasm used in the present study had narrow genetic base, although moderate to high genetic diversity was observed. The details of diversity analysis and the potential use of Indian common bean accessions in common bean breeding programme are provided in the present study.     

A validated mechanistic model of carrot (Daucus carota L.) growth

A mechanistic model of carrot vegetative and root development was constructed. This model determined canopy photosynthesis over a day, assimilates were then partitioned into either roots or leaves via temperature dependent partitioning coefficients. Assimilates were lost via terms describing growth and maintenance respiration. The model was calibrated on data from four different carrot cultivars, originating from the UK (Autumn King), Syria (Carrot_S), Poland (Dolanka) and Russia (Hibinskaja), grown in controlled environment glasshouse compartments at one of six temperatures (9–30 °C) repeated over three sowing dates. Calibration of the model showed that it could account for between 83 and 95% of the variance in carrot plant and root dry weights. The model was then validated using independent data from the same cultivars of carrots grown in the field at Reading. In this instance, the model accounted for 75 and 79% of the variance in plant and root weight, respectively. Two other independent data sets were used to validate the model, including carrot of a different cultivar (Panther) grown in phytotrons at temperatures between 9 and 21 °C, at two different locations and over a three sowing dates. In this instance, the model accounted for between 63 and 69% of the variance in root weight. The model also predicted that if ambient carbon dioxide levels increased from 348 to 551 μmol mol⁻¹, root dry weight would increase by 12%, which is within the margin of error of the experimental value of 16% reported in the literature. The model can therefore be used to study the potential impacts of global climate change on carrot production, as well as to rapidly predict whether germplasm is suited to any particular environment.     

Prediction of Major Agricultural Fruits Production in Pakistan by Using an Econometric Analysis and Machine Learning Technique

ABSTRACT

The aim of this study was to use an econometric analysis to investigate the relationship between agricultural gross domestic product (AGDP) and variables such as apple, citrus, pears, grape and banana in Pakistan; data were explored from 1980 to 2015; we used time series data collected from secondary sources, including the Pakistan Bureau of Statistics, Statistical Year Books and the Economic Survey of Pakistan. Data were analyzed by using the Ordinary Least Square (OLS) method and Augmented Dickey Fuller (ADF) test, and results were interpreted by using the Johansen co-integration test. The machine learning technique was used to examine and predict the future agricultural productivity in Pakistan. We found that output of banana, citrus and pears had a positive and significant influence on AGDP, whereas apples and grapes had a negative but insignificant influence on AGDP.     

Study of genetic diversity in Indian and exotic sesame (Sesamum indicum L.) germplasm using random amplified polymorphic DNA (RAPD) markers

Fifty-eight accessions of sesame (Sesamum indicum L.), an important oil seed crop of the tropics and subtropics were analysed using random amplified polymorphic DNA (RAPD) technique. The material analysed comprised 36 collections from 18 different states of India and four adjoining countries of the Indian subcontinent, and 22 exotic accessions from 21 sesame growing countries around the world. The results from PCR amplifications with the selected 24 random 10-mer primers were statistically analysed. The value of Jaccard’s similarity coefficients ranged from 0.19 to 0.89. The results indicated the presence of high level of genetic diversity. However, the extent of genetic diversity was greater in the collections from Indian subcontinent as compared to the exotics. Among the Indian accessions, the collections from Rajasthan and North-eastern states were highly diverse. The phenetic analysis grouped 48 out of 58 accessions in six clusters and the remaining highly diverse accessions were placed outside these close-knit clusters. The Bootstrap estimates obtained by Wagner parsimony analysis were significant for seven out of 49 nodes in the majority-rule consensus tree (<95% occurrence). The results of both the analyses were, however, broadly comparable when the constitution of the individual clusters were considered. The principal components analysis indicated that the first two components accounted for only 21% of the total variations and in order to explain <75% of variations 18 components were required. The high level of genetic diversity prevalent among the Indian collections is probably indicative of the nativity of this crop species. Similarly, the relatively lower level of polymorphism in exotic germplasm could be ascribed to the comparatively recent introductions of limited germplasm of this crop into some of the non-traditional sesame growing countries. This revised version was published online in August 2006 with corrections to the Cover Date.     

Rheological Properties of Full-Formula Doughs Derived from Near-Isogenic 1BL/1RS Translocation Lines

Four pairs of near-isogenic wheat lines, with and without the 1BL/1RS translocation, and differing at the Glu-1 loci (coding for high molecular weight [HMW] glutenin subunits) were evaluated for their dough mixing properties, dough stickiness, and baking performance. In all 1BL/1RS translocation lines, weakening of the dough consistency occurred within 2 min past peak time. The full-formula dough from every 1BL/1RS translocation line exhibited poor dough mixing characteristics and increased stickiness compared to the corresponding wheat control. The HMW glutenin subunits coded by the Glu-A1 locus had no apparent effect on mixing properties, but did have a slight effect on the dough stickiness at two of the four stages of dough mixing. Glu-B1 and Glu-D1 loci encoded glutenin subunits produced significant changes in dough mixing properties and dough stickiness, respectively. With respect to baking performance, there was no significant difference between loaf volumes of 1BL/1RS versus control wheats for three of four near-isogenic pairs. Within the 1RS-group, the translocation lines containing HMW glutenin subunits 5+10 produced bread with greater loaf volumes than the pairs containing its allelic counterpart 2+12. Loaf volume was not influenced by the subunits associated with the Glu-B1 loci. In general, the breads baked from 1BL/1RS translocation lines had a relatively poor crumb and crust quality and contained larger gas cells than the wheat controls. In comparing isogenic pairs, the magnitude of the difference in loaf volume between the control wheat and the corresponding 1BL/1RS translocation line was greater in the pair unique for HMW subunits 5+10; the difference was primarily due to the stronger mixing properties of the wheat control.     

A New Probability Model for Hydrologic Events: Properties and Applications

Upon the motivation of unstable climatic conditions of the world like excess of rains, drought and huge floods, we introduce a versatile hydrologic probability model with two scale parameters. The proposed model contains Lindley and exponentiated exponential (Lindley in J R Stat Soc Ser B 20:102–107, 1958; Gupta and Kundu in Biom J 43(1):117–130, 2001) distributions as special cases. Various properties of the distribution are obtained, such as shapes of the density and hazard functions, moments, mean deviation, information-generating function, conditional moments, Shannon entropy, L-moments, order statistics, information matrix and characterization via hazard function. Parameters are estimated via maximum likelihood estimation method. A simulation scheme is provided for generating the random data from the proposed distribution. Four data sets are used for comparing the proposed model with a set of well-known hydrologic models, such as generalized Pareto, log normal (3), log Pearson type III, Kappa(3), Gumbel, generalized logistic and generalized Lindley distributions, using some goodness-of-fit tests. These comparisons render the proposed model suitable and representative for hydrologic data sets with least loss of information attitude and a realistic return period, which render it as an appropriate alternate of the existing hydrologic models. Supplementary materials for this paper are available online.     

Influence of organic and inorganic passivators on Cd and Pb stabilization and microbial biomass in a contaminated paddy soil

Purpose

Soil contamination with heavy metals, such as Cd and Pb, has caused severe health and environmental risks all over the world. Possible eco-friendly solutions for Cd and Pb immobilization were required to reduce its mobility through various cost-effective amendments.

Materials and methods

A laboratory incubation study was conducted to assess the efficiency of biochar (BC), zeolite (ZE), and rock phosphate (RP) as passivators for the stabilization of Cd and Pb in paddy soil as well as soil microbial biomass. Various extraction techniques were carried out: a sequential extraction procedure, the European Community Bureau of Reference (BCR), toxicity characteristic leaching procedure (TCLP) test, and single extraction with CaCl₂. The impact of passivators on soil pH, dissolved organic carbon (DOC), and microbial biomass (carbon, nitrogen, and phosphorus) was examined in the metal contaminated soil.

Results and discussion

The results showed that the exchangeable portion of Cd in soil was significantly reduced by 34.8, 21.6, and 18.8% with ZE, RP, and BC at a 3% application rate, respectively. A similar tendency of reduction in Pb soluble portion was observed by ZE (9.6%), RP (20%), and BC (21.4%) at a 3% application rate. Moreover, the TCLP leachate of Cd and Pb was apparently reduced by 17 and 30.3% with BC at a 3% application dose, respectively, when compared to the control. Soil pH, nutrients, and microbial biomass C, N, and P were significantly increased with the addition of BC, RP, and ZE passivators.

Conclusions

The results showed that the incorporation of BC, ZE, and RP significantly reduced the Cd and Pb mobility in paddy soil as well as enhanced soil nutrients and microbial biomass. Overall, among all the amendments, rice straw derived-BC performed better for Cd and Pb immobilization in paddy soil.

     

Determination of the role of salicylic acid and Benzothiadiazole on physico-chemical alterations caused by <Emphasis Type="Italic">Cucumber mosaic virus</Emphasis> in tomato

Shoe-string disease caused by Cucumber mosaic virus (CMV) is one of the major threats to tomato production worldwide. The alteration in some biochemical parameters in leaves of the susceptible tomato genotype (Nagina) associated with CMV infection and the effect of exogenous application of salicylic acid (SA) and benzothiadiazole (BTH) were studied in this paper. Results showed that exogenous treatment with SA and BTH not only led to plants which gave significantly more yield than diseased controls (DC), but also delayed symptom expression and reduced disease severity. Analysis of biochemical parameters indicated that exogenous application of elicitors and viral infection, significantly affected the activity of peroxidase (POD), superoxide dismutase (SOD), catalase (CAT) and ascorbate peroxidase (APX). Compared to the DC plants, minimum disease severity and maximum number of fruit were recorded after a single dose of SA + BTH. Maximum plant height was recorded after weekly application of SA and maximum fruit yield per plant was gained with single dose of SA. Moreover, the activity of POD was significantly elicited many-fold after weekly application of SA + BTH, while higher amount of SOD was recorded with single dose of SA. The activity of CAT was also significantly accelerated after weekly application of SA + BTH while increased level of APX was noticed with single dose of BTH. In conclusion, the combined application of SA and BTH played an important role in induction of defense mechanism against CMV infection and can be useful in tomato disease management programs.     

Evaluation of replacing fish meal with corn protein concentrate in Nile tilapia Oreochromis niloticus fingerlings commercial diet

Four isocaloric‐isonitrogenous diets containing 0, 50, 100 and 190 g/kg corn protein concentrate (CPC) as replacement for dietary fish meal were fed to Nile tilapia Oreochromis niloticus fingerlings for 8 weeks. Tilapia growth parameters were not significantly (p > .05) different in fish fed diets with 0, 50 and 100 g/kg CPC and found to be superior compared to those fed on 190 g/kg CPC. Fish dressing ratios and body composition were similar among all treatments. The electron microscope indicated that the stomach size of control fish was slightly smaller and the wall was thinner while the stomach of the fish fed all other levels of CPC undergone a remarkable size increase and their walls were thicker after feeding diets with CPC. Total aerobic bacterial and coliform counts were significantly decreased in fish intestine when fed diets with 100 and 190 g/kg CPC compared with fish fed diets with 0 g/kg or 50 g/kg CPC. This study indicates that it is possible to replace up to 534 g/kg of dietary fish meal in tilapia fingerlings using 100 g/kg of CPC without any negative effect on fish growth and proximate body composition.