Conventional analyses of data from dietary validation studies may misestimate reporting accuracy: illustration from a study of the effect of interview modality on children's reporting accuracy

OBJECTIVE: To compare two approaches to analysing energy- and nutrient-converted data from dietary validation (and relative validation) studies - conventional analyses, in which the accuracy of reported items is not ascertained, and reporting-error-sensitive analyses, in which reported items are classified as matches (items actually eaten) or intrusions (items not actually eaten), and reported amounts are classified as corresponding or overreported. DESIGN: Subjects were observed eating school breakfast and lunch, and interviewed that evening about that day's intake. For conventional analyses, reference and reported information were converted to energy and macronutrients; then t-tests, correlation coefficients and report rates (reported/reference) were calculated. For reporting error-sensitive analyses, reported items were classified as matches or intrusions, reported amounts were classified as corresponding or overreported, and correspondence rates (corresponding amount/reference amount) and inflation ratios (overreported amount/reference amount) were calculated. SUBJECTS: Sixty-nine fourth-grade children (35 girls) from 10 elementary schools in Georgia (USA). RESULTS: For energy and each macronutrient, conventional analyses found that reported amounts were significantly less than reference amounts (every P < 0.021; paired t-tests); correlations between reported and reference amounts exceeded 0.52 (every P < 0.001); and median report rates ranged from 76% to 95%. Analyses sensitive to reporting errors found median correspondence rates between 67% and 79%, and that median inflation ratios, which ranged from 7% to 17%, differed significantly from 0 (every P < 0.0001; sign tests). CONCLUSIONS: Conventional analyses of energy and nutrient data from dietary reporting validation (and relative validation) studies may overestimate accuracy and mask the complexity of dietary reporting error.     

Modeling gas transfer in a u-tube oxygen absorption system: Effects of off-gas recycling

A computer model characterizing the performance of a u-tube oxygen absorption system was developed based on finite difference-mass transfer calculations. Performance was assessed in terms of oxygen utilization, transfer efficiency and economy. The system evaluated was unique in that oxygen not absorbed initially (off-gas) was captured and recycled. Mass transfer coefficients derived from pilot-scale test data were used to calibrate the computer model. A separate series of tests served to verify the effects of off-gas recycling as predicted by the program. Simulation data indicate off-gas recycling can result in substantial savings in variable and total costs of oxygen transfer with only a minor increase in capital expenditures, both initially and when amortized. The benefits achieved will increase with lower oxygen flow rates, deeper shaft depths, and low influent dissolved oxygen concentrations. Performance algorithms developed should be useful to those establishing design conditions for pure oxygen u-tube systems.     

On-farm evaluation of three different hatchery sources of Pacific white shrimp (Litopenaeus vannamei) cultured in on-levee tanks in low-salinity waters of west Alabama

ABSTRACT

Shrimp farmers in Alabama who produce the Pacific white shrimp, Litopenaeus vannamei, have recently reported abnormally low survival at harvest. Farmers have hypothesized that this phenomenon may be due to disease, toxic algae, shrimp source, or reduced shrimp robustness in later stages of production. To compare performance of shrimp from different sources, postlarvae were obtained from three different hatcheries and stocked on the same day in on-levee tank systems (TS) on two farms (Farm 1-TS; Farm 2-TS1; Farm 2-TS2). Following 104 days of culture on Farm 2-TS1 and Farm 2-TS2, there were no differences in survival (72.8%–91.2%) or final weight (19.8–24.6 g). At Farm 1-TS following 107 days of culture, there were differences in survival from shrimp sourced from one hatchery (40.5%) compared to the other two hatcheries (61.0%–69.8%). Results demonstrated acceptable growth performance and survival from all hatchery sources.     

Using social media as a cost‐effective resource in the photo‐identification of a coastal bottlenose dolphin community

1. Bottlenose dolphins encountered around the Irish coast are considered part of a wide‐ranging coastal community; however, knowledge on the significance of the north of Ireland for this species is limited by a lack of dedicated effort.
2. Through social media, the opportunity now exists to gather large volumes of citizen science data in the form of high‐quality images, potentially extending the spatial and temporal scope of photo‐identification studies.
3. The purpose of this study was to investigate social media as a data resource for photo‐identification studies and to provide a preliminary assessment of bottlenose dolphins in the north of Ireland. Specifically, the study sought to examine the photo‐identification data for spatial clustering.
4. The study identified 54 well‐marked individuals and provided evidence of potential year‐round occurrence, with successful re‐sightings throughout the study period (2007–2016). There was a geographic concentration of re‐sightings along the north of Ireland, suggestive of interannual site fidelity. These results provide scientific rationale for strategically targeting the north of Ireland in future research on the Irish coastal community.
5. For effective conservation of the bottlenose dolphin it is imperative that scientific research, and resultant management objectives, consider wide‐ranging communities such as the Irish coastal community. Our research highlights data collection via social media as a cost‐effective and scientifically valuable tool in the photo‐identification of coastal cetaceans. We recommend that this method is used in research on low‐density and wide‐ranging coastal cetaceans.

     

The effect of piscidin antimicrobial peptides on the formation of Gram-negative bacterial biofilms

Fish-derived antimicrobial peptides are an important part of the innate immune system due to their potent antimicrobial properties. Piscidins are a class of antimicrobial peptides first described in hybrid striped bass (Morone chrysops x Morone saxatilis) but have also been identified in many other fish species. Previous work demonstrated the broad antimicrobial activity of piscidins against Gram-negative and Gram-positive bacterial species. This study sought to determine the extent to which class I (striped bass piscidin 1, white bass piscidin 1 and striped bass/white bass piscidin 3) and class II (striped bass piscidin 4 and white bass piscidin 5) piscidins inhibit biofilm formation of different Gram-negative bacteria. In general, the class I and II piscidins demonstrate potent activity against Escherichia coli and Flavobacterium columnare biofilms. The class II piscidins showed more activity against E. coli and F. columnare isolates than did the class I piscidins. The piscidins in general were much less effective against inhibiting Aeromonas hydrophila and A. veronii biofilm growth. Only the class I piscidins showed significant growth inhibition among the Aeromonas spp. examined.     

Caudocranial horizontal beam radiographic projection for evaluation of femoral fracture and osteotomy repair in dogs and cats

A new radiographic projection of the femur was evaluated for use in the assessment of fracture or osteotomy repair in small animals. The view is obtained by directing the x-ray beam horizontally through the hind limb, from caudad to craniad, with the animal positioned in lateral recumbency, the hip flexed, and the stifle extended. Views obtained, using the new projection, were compared with the standard ventrodorsal views of the pelvis, with hind limbs extended. Osteotomy lines in the femoral shaft were significantly (P less than 0.01) more visible on the horizontal beam view. Significant difference was not evident in visibility of fracture lines between the 2 radiographic projections. The horizontal beam view was easily obtained, and equivalent to the standard ventrodorsal view for radiographic evaluation of femoral fracture and osteotomy repair.     

What the soil reveals: Potential total ecosystem C stores of the Pacific Northwest region, USA

How much organic C can a region naturally store in its ecosystems? How can this be determined, when land management has altered the vegetation of the landscape substantially? The answers may lie in the soil: this study synthesized the spatial distribution of soil properties derived from the state soils geographic database with empirical measurements of old-growth forest ecosystem C to yield a regional distribution of potential maximum total-ecosystem organic C stores. The region under consideration is 179,000 square kilometers extending from the southern Oregon border to the northern Washington border, and from the Pacific Ocean to the east side of the Cascade Mountains. Total ecosystem organic C (TEC) was measured in 16 diverse old-growth forests encompassing 35 stands and 79 pedons to a depth of 100 cm. The TEC ranged between 185 and 1200 Mg C ha⁻¹. On an average, 63% of TEC was in the vegetation, 13% in woody detritus, 3% in the forest floor, 7% in the 0–20 cm mineral soil, and 13% in 20–100 cm mineral soil. The TEC was strongly related to soil organic C (SOC) in the 0–20 cm mineral soil, yielding a monotonically increasing, curvilinear relation. To apply this relation to estimate the TEC distribution throughout the region, 211 map units of the state soils geographic database (STATSGO) were used. The SOC in the 0–20 cm mineral soil of the map units was consistent with values from previously measured pedons distributed throughout the region. Resampling of 13 second-growth forests 25 years after initial sampling indicated no regional change in mineral SOC, and supported the use of a static state soils map. The SOC spatial distribution combined with the quantitative old-growth TEC–SOC relation yielded an estimate of potential TEC storage throughout the region under the hypothetical condition of old-growth forest coverage. The area-weighted TEC was 760 Mg C ha⁻¹. This is 100 Mg C ha⁻¹ more than a previous estimate based on a coarser resolution of six physiographic provinces, and 400 Mg C ha⁻¹ more than current regional stores. The map of potential TEC may be useful in forecasting regional C dynamics and in land-management decisions related to C sequestration.     

Effect of crabgrass (Digitaria ciliaris) hay harvest interval on forage quality and performance of growing calves fed mixed diets

Twelve 0.81-ha crabgrass (Digitaria ciliaris [Retz.] Koel.) hay fields were harvested at 21, 35, and 49 d of regrowth (average phonological growth stage of 30, 51, and 56, respectively). Increased harvest interval exhibited a linear decrease (P < 0.01) in CP (14.1, 13.7, and 10.6% of DM, respectively) and increase (P < 0.01) in NDF (65.3, 70.6, and 70.2% of DM, respectively) and ADF (35.7, 38.9, and 42.7% of DM, respectively). Hays were incorporated into 3 diets that contained 20% (DM basis) crabgrass hay, ground corn (33%), and soybean hulls (32%). Diets contained 14.4, 14.4, and 13.6% CP; 1.83, 1.72, and 1.81 Mcal of NE(m)/kg; and 1.21, 1.10, and 1.17 Mcal of NE(g)/kg; respectively. Diets were fed to beef calves in 12 pens at a rate of 2.3% (DM basis) of BW in 1 experiment (n = 120, initial BW 210 +/- 4.4 kg) and ad libitum in another experiment (n = 60, initial BW 207 +/- 4.4 kg). To measure passage rate of the hay and concentrate portions of the diets, 12 heifer calves (BW = 145 +/- 4.5 kg) were individually fed at 2.3% of BW for 14 d and dosed with Dy-labeled soybean hulls and Yb-labeled hay. In situ DM digestibility of the hays and diets were determined using 3 ruminally cannulated steers (BW = 584 +/- 10.4 kg). Harvest interval did not affect (P > or = 0.11) ADG of limit-fed calves during the diet acclimation or growing phases (average 0.32 and 0.80 kg, respectively) or ADG of calves fed ad libitum (average 1.21 kg). Dry matter intake of calves fed ad libitum averaged 7.9 kg/d (3.28% of BW) and was not affected (P > or = 0.22) by harvest interval. Gain:feed was not affected (P > or = 0.20) by harvest interval (0.13 and 0.15 for limit-fed and ad libitum-fed calves, respectively). Increased harvest interval linearly increased (P < 0.01) ruminal retention time of the hay and tended (P = 0.06) to linearly increase ruminal retention time of the concentrate portions of the diet. Harvest interval linearly decreased (P < or = 0.05) the extent of degradability and effective degradability of DM and NDF of hays, but DM disappearance of the total diet did not differ (P > or = 0.35). In the conditions of this study, increasing harvest interval of crabgrass hay from 21 to 49 d had no deleterious impact on animal performance or efficiency of gain when fed to growing calves in a high-concentrate mixture.     

Screening techniques and improved biological nitrogen fixation in cool season food legumes

Dinitrogen fixation and legume productivity are greatly influenced through the interactions of legume host, Rhizobium, and the above- and below-ground environment. The benefits of improving legume N₂ fixation include reduced reliance on soil N, leading to more sustainable agricultural systems and reduced requirements for fertilizer N, enhanced residual benefits to subsequent crops, and increased legume crop yields. Most of the gains in N₂ fixation to date have been derived from management of legume cropping systems and through inoculation of legume seed with competitive and symbiotically effective rhizobia. Further gains are possible by developing plant cultivars with tolerance to soil abiotic factors, increased plant yield, and a broader and more effective matching of plant host and rhizobia. Techniques for screening material for superior N₂ fixation and examples of programs to increase fixed N, with attention to the major abiotic stresses, are discussed.