Study of genetic diversity in Indian and exotic sesame (Sesamum indicum L.) germplasm using random amplified polymorphic DNA (RAPD) markers

Fifty-eight accessions of sesame (Sesamum indicum L.), an important oil seed crop of the tropics and subtropics were analysed using random amplified polymorphic DNA (RAPD) technique. The material analysed comprised 36 collections from 18 different states of India and four adjoining countries of the Indian subcontinent, and 22 exotic accessions from 21 sesame growing countries around the world. The results from PCR amplifications with the selected 24 random 10-mer primers were statistically analysed. The value of Jaccard’s similarity coefficients ranged from 0.19 to 0.89. The results indicated the presence of high level of genetic diversity. However, the extent of genetic diversity was greater in the collections from Indian subcontinent as compared to the exotics. Among the Indian accessions, the collections from Rajasthan and North-eastern states were highly diverse. The phenetic analysis grouped 48 out of 58 accessions in six clusters and the remaining highly diverse accessions were placed outside these close-knit clusters. The Bootstrap estimates obtained by Wagner parsimony analysis were significant for seven out of 49 nodes in the majority-rule consensus tree (<95% occurrence). The results of both the analyses were, however, broadly comparable when the constitution of the individual clusters were considered. The principal components analysis indicated that the first two components accounted for only 21% of the total variations and in order to explain <75% of variations 18 components were required. The high level of genetic diversity prevalent among the Indian collections is probably indicative of the nativity of this crop species. Similarly, the relatively lower level of polymorphism in exotic germplasm could be ascribed to the comparatively recent introductions of limited germplasm of this crop into some of the non-traditional sesame growing countries. This revised version was published online in August 2006 with corrections to the Cover Date.     

Identification of gut‐associated amylase,cellulase and protease‐producing bacteria in three species of Indian major carps

Isolation and enumeration of amylase, cellulase and protease‐producing autochthonous bacteria in the proximal intestine (PI) and distal intestine (DI) of three species of Indian major carps, catla (Catla catla), mrigal (Cirrhinus mrigala) and rohu (Labeo rohita), were investigated using the conventional culture‐based technique. Population levels of amylolytic strains were the highest in the PI of catla and the lowest in the DI of rohu. The highest viable count of cellulase and protease‐producing bacteria was recorded in the DI and PI of mrigal respectively. Among the bacteria isolated, 10 strains (five from PI and five from DI) were selected as potent enzyme producers according to a quantitative enzyme assay. The chosen strains were further identified by 16S rRNA gene sequence analysis. The five strains isolated from catla showed high similarity to Citrobacter sp. clone W2, Enterobacter sp. JA24, Bacillus coagulans strain TR, uncultured bacterial clone Hel3bc04 and Bacillus cereus strain UST2006‐BC004. The four strains isolated from mrigal were most closely related to Bacillus sp. KCd2, uncultured bacterial clone Hel3bd09, B. cereus strain BU040901‐020 and Citrobacter freundii strain YRL11, while the strain isolated from rohu probably belonged to Bacillus sp. GV.     

Exploration of ready-to-eat soft Bora rice genotypes of Assam for submergence tolerance

Journal of Crop Science and Biotechnology - Assamese Bora rice lines are valuable genetic resource for their socio-economic importance and traditional usage. Being lowland rice lines of upper...     

Influence of integrated nutrient management (INM) on nutrient use efficiency,soil fertility and productivity of hybrid rice

A field experiment was conducted during the two consecutive kharif seasons of 2011 and 2012 on sandy-loam lateritic soil of Indian subtropics to investigate the impact of integrated nutrient management (INM) on crop productivity, nutrient use efficiency of applied nutrients and soil fertility in restoring sustainability with hybrid rice cultivation. Application of 50% recommended dose of fertilizer (RDF) + 50% recommended dose of nitrogen (RDN) through mustard oil cake (MOC) or 75% RDF + 25% RDN through MOC + biofertilizer recorded significantly higher grain and biomass yields, greater NPK removal and higher partial factor productivity of applied nutrient (PFPN) than those of the crop having 100% RDF, 100% RDN through MOC and 25% RDF + 75% RDN through MOC, which showed very poor performance. The former treatments also improved organic carbon and available NPK contents in soil in spite of greater removal of NPK by the crop. Results of study suggested integrated use of 50% RDF + 50% RDN through MOC or 75% RDF + 25% RDN through MOC + biofertilizer for increasing hybrid rice productivity, PFPN and improving soil fertility for sustainability.     

Changes in colostrum of Murrah buffaloes after calving

Colostrum samples were collected from 8 Murrah buffaloes on days 1, 2, 3, 4 and 5 after calving. Levels of IgG averaged 54.0 mg/ml at calving, then decreased significantly (P < 0.01). IgA and IgM on day 1 were 3.22 mg/ml and 5.22 mg/ml, respectively; both decreased during the first five days after calving. Values of IgA and IgM were higher than those reported in cows. SCC values, which were high at calving (500 000 per ml), reduced significantly (P < 0.01) on day 2, then decreased slightly until day 5 (180 000 per ml). At calving, macrophages were the most prominent cells in buffalo colostrum, followed by lymphocytes and neutrophils. Phagocytic activity was 23% at calving and reduced significantly (P < 0.01) to 14% on day 5. Phagocytic index was highest in the first colostrum, and then decreased non-significantly.     

Effect of Gluconacetobacter diazotrophicus and Trichoderma viride on soil health, yield and N-economy of sugarcane cultivation under subtropical climatic conditions of India

Intensive cropping and exhaustive nature of sugarcane–wheat–rice cropping system in the Indo-Gangetic Plains of South Asia have led to the depletion of soil organic carbon content and inherent soil fertility resulting in a serious threat to the sustainability of these production systems. Bioagents like Gluconacetobacter diazotrophicus and Trichoderma viride have great potential to restore soil fertility and promote sugarcane growth. Field experiments, therefore, have been conducted to study the integrated effect of bioagents (G. diazotrophicus and T. viride), Farm Yard Manure (FYM) and fertilizer N on sugarcane rhizosphere, crop yield and N economy for two crop cycles during 2004–2006 and 2005–2007 crop seasons at Lucknow, in the middle Indo-Gangetic plain region. Both bioagents could survive and colonize sugarcane rhizosphere and FYM improved their colonization. Enhanced soil microbial population and microbial carbon (SMC) and nitrogen (SMN) with increasing N level were probably due to more available N in the soil. FYM/bioagents amendment further enhanced the microbial carbon. The uniform increase in the fraction of SMC and SMN of total organic carbon indicated that immobilization/mineralization was being maintained in the soil where enhanced microbial biomass might act later as a source of nutrients.Bioagents ammended FYM enhanced the uptake of N, P and K in sugarcane at all the levels of fertilizer N. It was mainly due to the enhanced nutrient availability in the rhizospheric soil as the soil organic C and available N, P and K content increased with the application of bioagents/FYM. A saving of 76.3 kg N ha⁻¹ was envisaged by the use of G. diazotrophicus inoculated FYM with marginal (2.4 t ha⁻¹) decline in the cane yield. Application of T. viride enriched FYM, however, brought economy in the use of fertilizer N by 45.2 kg ha⁻¹ and also increased the yield by 6.1 t ha⁻¹compared to the control treatment. Overall, strategic planning in terms of an integrated application of these bioagents/manures with fertilizer N will not only sustain soil fertility but will also benefit farmers in terms of reducing their dependence and expenditure on chemical fertilizers.     

Downy mildew resistance in opium poppy: resistance sources,inheritance pattern,genetic variability and strategies for crop improvement

Downy mildew (DM) caused by Peronospora arborescens is the most destructive disease of opium poppy which assumes considerable importance in India and other poppy growing countries. The present study was aimed at identification and evaluation of stable resistance sources of DM in opium poppy. Furthermore, genetic variability and inheritance pattern of DM resistance has also been studied which can help in making strategy for crop improvement. Evaluation of 35 selected germplasm accessions of opium poppy under glasshouse and field conditions during the three consecutive years (2004–2005 to 2006–2007) resulted in identification of two genotypes (I-14 and Pps-1) as highly resistant and stable sources for DM resistance. Genetic studies of DM resistance revealed polygenic control with the dominance of susceptibility over resistance. Significant reciprocal differences were found largely due to maternal transmission of DM resistance indicating the involvement of cytoplasmic genes in addition to nuclear control. Analysis of genetic variability and selection parameters indicated predominance of additive effects for DM resistance and other yield contributing traits. Multivariate analysis resulted in classification of 35 selected accessions into 11 different clusters revealing very high level of diversity among the genotypes. Cluster analysis suggested that hybridization program involving genotypes from cluster V (which included highly resistant genotypes Pps-1 and I-14) and cluster IX (which included highly susceptible Jawahar-16 having good economically important traits like seed yield) could be expected to give best recombinants for improvement in terms of DM resistance and high seed and straw yield in opium poppy. Analysis of selection parameters like heritability and genetic advance also suggested that simple selection methods will be effective in stabilizing resistance traits following hybridization with high yielding genotypes.     

Partial Replacement of Fishmeal by Fermented Fish-Offal Meal in the Formulation of Diet for Indian Minor Carp Labeo bata

Fermented fish-offal (FO) meal was used as a protein supplement to replace fishmeal (FM) in the formulation of experimental diets for the Indian minor carp Labeo bata. The two supplementary diets, one containing 25% FM plus 25% FO and the other containing 20% FM and 30% FO, showed significantly higher digestibility, growth, and protein deposition than the reference diet containing 40% FM. Partial budgeting of diet formulation and net return revealed that 50% replacement of FM by fermented fish-offal meal rendered a total positive benefit of 134% as compared with the reference diet.