Detection of stapylococcal enterotoxin,methicillin-resistant and Panton–Valentine leukocidin genes in coagulase-negative staphylococci isolated from cows and ewes with subclinical mastitis

Coagulase-negative staphylococci (CNS) are the most prevalent mastitis pathogens. However, virulence characteristics of CNS have not been well determined. The presence of genes for enterotoxins (sea-sej), toxic shock syndrome toxin-1 (tst), the exfoliative toxins (eta, etb), Panton–Valentine leukocidin (pvl) and mecA of CNS species isolated from cows and ewes with subclinical mastitis was investigated in this study. A total of 121 CNS (81 cows, 40 ewes) representing 18 different Staphylococci species were examined by PCR, and 38.1% (33 cows and 13 ewes) of CNS isolates had one or more se genes. The difference between percentages for SE toxin genes of CNS strains isolated from cows (40.7%) and ewes (32.5%) was not statistically significant (P > 0.05; χ ² = 0.380). It was found that S. simulans isolates had the highest prevalent se genes. Furthermore, the most common SE gene types was seh-sej. In this study, none of the isolates harbored the toxic shock syndrome toxin gene (tsst) and the exfoliative toxin genes (eta, etb). Five cow (6.17%) and three ewe CNS (7.5%) isolates had mecA gene. Three cow (3.7%) and two ewe CNS (5.0%) isolates had pvl gene. In conclusion, the present study showed that CNS species isolated from cows and ewes could serve as potential reservoir of se, mecA, and pvl genes.     

Phytophthora citrophthora,a new pathogen causing decline on horse chestnut in Turkey

Dieback symptoms were observed on horse chestnut trees planted approximately 40 years ago in Ankara, Turkey. Lesions at the stem bases of the affected trees were similar to those of ink disease on sweet chestnut. A Phytophthora sp. was isolated from the fine roots and soil samples collected around the stem bases by baiting using chestnut leaves. The pathogen was identified as Phytophthora citrophthora based on several morphological features and DNA sequences of the ITS region. Pathogenicity of P. citrophthora was tested by stem inoculation on 3‐year‐old horse chestnut saplings. P. citrophthora produced large cankers in 20 days and killed 40% of the saplings. This is the first report of P. citrophthora causing dieback on horse chestnut.     

Armillaria ostoyae associated with dying 60‐year‐old Scots pines in northern Turkey

We investigated an Armillaria root disease centre in a 60‐year‐old, naturally regenerated Pinus sylvestris stand located at 1250 m altitude in Sinop province in northern Turkey. Based on sequence analysis of the internal transcribed spacer region of the rDNA, the mycelial fans sampled from the infected trees were Armillaria ostoyae. Multilocus genotyping indicated that the fans belonged to a single genet, at least 0.2 ha in size. Drought as a predisposing factor is discussed. The study area received 50–70 and 25–50% of the normal precipitation in May, June and August in 2009 and in August and September in 2010, respectively. Moreover, earlier excavation work to prepare a forest road had probably disrupted the water table in the affected stand.     

Development of EST‐SSR markers for diversity and breeding studies in opium poppy

All publicly available opium poppy expressed sequence tag (EST) sequences, totalling 20 885, were assembled into unigenes and examined for simple sequence repeats (SSRs). Nearly 19% of the 14 957 unigenes contained SSRs with 4% harbouring more than one SSR. Average density of the SSRs was 1 SSR per 3.6 kb of non‐redundant EST sequence. Trinucleotide SSRs were most frequently identified (39%), and many of the most prevalent motifs were AT‐rich. Flanking primers were designed for 86% of the SSRs and 67 primer pairs were tested on 37 opium poppy accessions and seven related species. All markers were transferable to the related species. Polymorphism information content (PIC) values for the markers were intermediate for comparisons within opium poppy (average of 0.27) and slightly higher for comparisons across species (average of 0.29). The markers were found to be useful for diversity analysis as they successfully distinguished among Turkish opium poppy accessions and land races.     

Effects of Different Irrigation Levels and Arbuscular Mycorrhizal Fungi (AMF), Photosynthesis Activator,Traditional Fertilizer on Yield and Growth Parameters of Dry Bean (Phaseolus Vulgaris L.) in Arid Climatic Conditions

A field experiment has been conducted to determine the effects of different irrigation water and AMF (Arbuscular Mycorrhizal Fungi) biofertilizer, photosynthesis activator and traditional fertilizer dry bean (Phaseolus vulgaris L.) on yield and growth parameters in Nevsehir Province of Turkey in 2015. The experiment has been carried out using three replications in a split plot design with three different irrigation types as main plots and AMF biofertilizer (ERS), photosynthesis activator (Multigreen-Mg), traditional fertilization (TF-Control), ERS + Mg, ERS + TF and TF + Mg applied as subplots. The number of pods per plant, the length of pods, the number of grains per pod, the weight of grains per plant, the yield of grains, 1000 seed weight, the number of grains per plant, protein yield, arbuscular mycorrhizal fungi rate have been evaluated as yield and growth criteria in the study. In the experiment, as well as the treatment x irrigation interaction, the plant height, pod number per plant, pod lenght, grain number per pod, grain weight per plant, grain yield, 1000 seed weight, grain number per plant, protein rate/grain, protein yield, root weight and AMF colonization parameters, were the other studied properties that were found to be significant. The results obtained were 877.6 mm for I₁₀₀ irrigation treatment, 512.2 mm for I₅₀ irrigation treatment and 40.19 mm water for I₃₀ irrigation treatment. Regarding the growth parameters of dry bean, the highest PH was in ERS + Mg (67.66 cm), the lowest PH was in ERS (54.33 cm); In I₅₀, the highest Plant Height (PH) was in ERS + Mg (65.66 cm), the lowest PH was in TF-Control (53.00 cm); and in I₃₀, the highest PH was in TF-Control (50.66 cm), and the lowest PH was again in ERS + Mg (44.33 cm). For protein yield (PY) value, ERS + Mg, ERS + TF, TF + Mg have been placed in the same group, in I₁₀₀ and I₅₀ irrigation treatment. The highest value was ERS + TF (34.90 kg da^?1) in I₁₀₀, The lowest value was TF-control (19.90 kg da^?1) in I₃₀ irrigation treatment. In terms of mycorrhiza colonization ratio, ERS has been ranked first in all irrigation treatments, while the highest mycorrhiza colonization has been observed in I₃₀ irrigation treatment (26.30%). ERS was followed by ERS + Mg (23.33%). As expected, the lowest mycorrhiza colonization ratio in all irrigation treatments have been observed in TF-control treatment, while the highest mycorrhiza colonization ratio has been respectively observed in I₃₀ and I₅₀ irrigation topics. The highest root weight (RW) in I₁₀₀ irrigation treatment was observed in ERS (15.06 g plant^?1) and it was observed in ERS (19.05 g plant^?1; 26.30 g plant^?1) in I₅₀ and I₃₀ irrigation treatments. The lowest RW in all irrigation treatments has been observed in TF + Mg (4.43 g plant^?1, 6.40 g plant^?1, 10.26 g plant^?1), respectively.     

Immunohistochemical studies on the splenic lobe of the pancreas in young Japanese quails (Coturnix c. japonica)

The splenic lobe (Lobus splenicus) of the pancreas of young meat-type quails (Coturnix c. japonica) was examined by immunohistochemical and light microscopic methods. The endocrine cells are mainly grouped as alpha, beta and mixed islets. A large region consisting of alpha cells is located in the central region of the splenic lobe whereas numerous beta islets are detected in the periphery of the splenic lobe. Alpha islets are in the majority composed of toluidine blue positive A cells and a few toluidine blue negative D and / or avian pancreatic polypeptide (APP) endocrine cells. Beta islets contain only a few toluidine blue negative B and a few D cells. Immunohistochemical staining of the splenic lobe reveal in the centre of beta islets numerous insulin immunoreactive cells and scarcely in alpha islets, exocrine tissue and / or among acinar cells. Somatostatin immune-reactive cells form a circular layer in the periphery of beta islets whereas these cells are uniformly distributed throughout the alpha islet parenchyma and exocrine tissue. In conclusion, the morphology but also the endo- and exocrine functions of the splenic lobe of quails are similar to observations in other avian species such as chicken, duck, goose and pigeon.     

Polymerase chain reaction detection of Salmonella spp. in fecal samples of pet birds

The aims of this study were 1) to determine the prevalence of Salmonella in clinically ill birds in aviaries in Ankara, Turkey, and 2) to compare conventional culture and polymerase chain reaction (PCR) for detection of Salmonella in feces from clinically ill pet birds. In the study, 185 fecal samples (feces and/or swabs) collected from the pet birds kept in the seven different aviaries in the city of Ankara were investigated for the existence of Salmonella spp. by bacterial isolation and PCR. The conventional isolation and identification methods were performed for Salmonella isolation from fecal cultures. Suspected colonies were confirmed with the Salmonella polyvalent O antiserum and serogrouped with Salmonella group-specific antiserum. PCR was performed after the fecal swabs were incubated for 18 hr in 10 ml of tetrathionate broth. Three (1.63%) out of 185 fecal samples were found to harbor Salmonella spp. by conventional identification tests and were found to belong to serogroup B. Five (2.7%) swab samples were found to harbor Salmonella DNA by PCR tests. As a conclusion, PCR following incubation of clinical samples in pre-enrichment broth seemed to be a fast and practicable method for Salmonella spp. diagnosis when compared to protracted labor-intensive conventional culture techniques.     

The effects of the conjunctival Brucella vaccine on some biochemical parameters in sheep

The genus Brucella causes significant economic losses due to infertility, abortion, stillbirth or weak calves, and neonatal mortality in livestock. Brucellosis is still a zoonosis of public health importance worldwide. In the past, vaccination was administered subcutaneously and nowadays, the conjunctival vaccine is administered. There is no definite information about the changes of the biochemical parameters and antibody response after conjunctival vaccination. In this study, the investigation of the changes in the levels of some biochemical parameters due to the conjunctival vaccination for brucellosis was aimed. Thirty sheep were used as an animal material. The vaccine was done single dose against Brucella melitensis and the blood was drawled from Vena jugularis during 4 months. Antibody levels were determined by serum tube agglutination test. Alkaline phosphatase (ALP), alanine aminotransferase (ALT), aspartate aminotransferase (AST), lactate dehydrogenase (LDH), glucose, total protein, and albumin levels were measured using commercial autoanalyzer in sera. The antibody titers (p?<?0.001) increased significantly at first month compared to the pre-vaccination, but at the second month began to fall. There was no statistically significant changes in glucose, AST, ALT activity after vaccination (p?>?0.005). The significant amount of total protein and ALP decreased after vaccination (p?<?0.005). LDH levels and total protein levels were significantly increased (p?<?0.005). In conclusion, conjunctival vaccine was considered to be used as a safe to protect the sheep from brucellosis and the results of the study may be used to improve the efficiency of brucellosis eradication programs within livestock management.

     

Effects of Irrigation Frequency on Yield and Quality Parameters in Apple c.v. ‘Gala,Galaxy’

This study was conducted in 2007 and 2008 in order to determine the effects of irrigation frequency on the yield and quality parameters of dwarf trees of the apple cultivar ‘Gala, Galaxy’ in the first and second year of cultivation. Irrigation water was applied at 3?, 5?, 7?, and 10-day intervals as much as the amount of water consumed from the field capacity. Statistical analysis revealed that the effects of irrigation frequency on yield were significant. Since the trees used in the experiment showed mainly vegetative growth, the effects of irrigation frequency on the fruit quality characteristics varied. Irrigation water amount was applied as 355.7–446.5 mm and 359.2–538.9 mm to the experimental treatments in 2007 and 2008, respectively. The evapotranspiration measured was in the range 400.7–491.5 mm in 2007 but in the range 440.2–600.5 mm in 2008, while the yields in the same years ranged from 1.54 to 2.84 t ha^?1 and from 2.61 to 6.06 t ha^?1. Water use efficiency varied between 2.40 and 4.80 t ha^?1mm^?1 in the first year of the experiment but between 3.45 and 7.08 t ha^?1mm^?1 in the second year. The I₂ treatment, in which the highest yield and water use efficiency were recorded in both years of the experiment under the experimental conditions, was determined as the irrigation scheduling.     

A field study on the efficacy of doramectin against strongyles and its egg reappearance period in horses

The aim of the present study was to determine the efficacy and the so-called "egg reappearance period" (ERP) of doramectin in horses naturally infected with strongyles during a period of 34 weeks. A group of yearlings of 10 animals was treated intramuscularly with doramectin at a dose rate of 0.2 mg/kg bodyweight (BW) at the begin of the grazing season. To obtain comparable data, another group of yearlings (n = 10) was treated orally with ivermectin at a dose rate of 0.2 mg/kg BW. Individual faecal samples were examined for strongyle egg counts per gram of faeces (EPG) in two-week intervals. Twelve weeks later, a second treatment was given in both groups with the respective anthelmintic followed by a third treatment when the group mean egg count reached > or = 200 EPG. The efficacy of doramectin was > or = 96 % and that of ivermectin 100%, based on the mean egg counts two weeks post treatments (wpt). The highest and the lowest extensity of the efficacy (average values) for doramectin were 90% and 41% two and ten wpt, respectively, whereas these values for ivermectin differed from 100% (two wpt) to 24.3% (eight wpt). The ERP was found to be 10 and 8 weeks for doramectin and ivermectin, respectively.