Proteome analysis of the sarcoplasmic fraction of pig semimembranosus muscle: implications on meat color development

Two-dimensional electrophoresis was used to investigate sarcoplasmic protein expression in pig Semimembranosus muscles sampled 20 min after slaughter. Two groups (light and dark) of 12 animals were selected from 1000 pigs, based on meat L values measured 36 h postmortem. Twenty-two proteins or fragments (p < 0.05) were differentially expressed. Muscles leading to darker meat had a more oxidative metabolism, indicated by more abundant mitochondrial enzymes of the respiratory chain, hemoglobin, and chaperone or regulator proteins (HSP27, alphaB-crystallin, and glucose-regulated protein 58 kDa). Conversely, enzymes of glycolysis were overexpressed in the lighter group. Such samples were also characterized by higher levels of glutathione S-transferase omega, which can activate the RyR calcium channels, and higher levels of cyclophilin D. This protein pattern is likely to have severe implications on postmortem metabolism, namely, acceleration of ATP depletion and pH fall and subsequent enhanced protein denaturation, well-known to induce discoloration.     

Long-term manuring and fertilization influence soil inorganic phosphorus transformation vis-a-vis rice yield in a rice–wheat cropping system

A study on the rice–wheat cropping system was conducted at Bidhan Chandra Krishi Viswavidyalaya, West Bengal, India, to assess the effects of long-term manuring and fertilization on transformation of the inorganic phosphorus (P) fraction in soil after 22 years of the crop cycle. Soil samples were collected after Kharif from seven treated plots having different types of organic amendments like farm yard manure, paddy straw and green manuring with 50% substitution of nitrogen levels in rice crop only. The result showed that the yield trend of rice was maintained due to the buildup of P from various organic inputs. Although cultivation for 22 years without adding any fertilizer caused a significant decrease in almost all the forms of P viz. avail-P, saloid P, iron phosphorus fraction (Fe–P), aluminum phosphorus fraction (Al–P), calcium phosphorus fraction (Ca–P) and total P in control. Partial substitution of inorganic fertilizer N (50%) with organics, however, caused a significant increase in almost all the P fractions in soil over the control. The relative abundance of all the fractions of inorganic P irrespective of treatments was as follows: Fe–P > reductant soluble P fraction > occluded P > Al–P > Ca–P > saloid P. Saloid and Fe–P were the dominating fractions responsible for 92% variation of available P and total P levels, respectively.     

Evaluation of chitosan and alginate immobilized Methylobacterium oryzae CBMB20 on tomato plant growth

Methylobacterium oryzae CBMB20, a promising plant growth promoting bacteria (PGPB) and a biocontrol agent, was immobilized in different formulations such as wet chitosan, dry chitosan, wet alginate and dry alginate and were tested for tomato plant growth promotion. Chitosan solution (1.5%) with pH 5.5–6.0 and 90 min contact time was found optimal for immobilization. The chitosan formulations showed better entrapment efficiency and good degradability resistance apart from slow release of cells under prolonged incubation. Survivability of bacteria (80%) was observed in wet chitosan formulation even after 90 days of storage at 4°C. The spermosphere survival of bacteria was high in both dry and wet chitosan formulations applied soils even after 21 days under greenhouse conditions. While the alginate formulation degraded fully, partial degradation of chitosan formulation was observed even after 30 days, indicating its ability to support the survival of M. oryzae CBMB20 in soil. Plants inoculated with wet chitosan formulation registered 1.3 fold increase in the shoot and root length and dry weight compared to other treatments. Hence, chitosan formulation supporting better plant growth compared to alginate will be a better carrier for taking bacteria to the plant rhizosphere and thereby promote plant growth.     

A correlation study of vehicle-generated air pollutants

The concentrations of Pb, CO, CH₄ and total hydrocarbons have been measured at a roadside site and at the exit of a multistorey car park. Average concentrations over short periods (10 to 25 min) have been calculated for each pollutant and possible correlations between these average levels of the different pollutants investigated. Significant correlations were found at only one site and the conclusion was drawn that it is only under exceptional conditions that correlations in levels exist over these extremely short averaging periods.     

Speciation in the parthenogenetic oribatid mite genus Tectocepheus (Acari, Oribatida) as indicated by molecular phylogeny

Despite the lack of universal concepts for species and speciation, both sexual and asexual organisms are expected to diversify into discrete genotypic and morphological clusters. Species-rich clusters of parthenogenetic oribatid mites likely evolved in the absence of sexual reproduction. We used nucleotide sequences of the large and small rDNA genes (18S and 28S) and the coding genes for heat shock protein 82 (hsp82) and elongation factor-1 alpha (ef-1α) for phylogenetic analyses of three morphotypes of the parthenogenetic oribatid mite genus Tectocepheus. DNA sequence divergences of the different morphotypes were similar to those of sexual species in other organisms. Maximum likelihood analyses of single genes and combined data sets were largely congruent in reconstructing the phylogeny of the Tectocepheus species. The results suggest that the different morphotypes of Tectocepheus indeed evolved in the absence of sexual reproduction, and that Tectocepheus minor, Tectocepheus velatus and Tectocepheus sarekensis are best considered distinct species. Further, the results suggest that 18S rDNA, hsp82 and ef-1α are powerful markers for resolving phylogenetic relationships of oribatid mites. Saturation plots indicated that the D3-region of 28S is much more saturated than all other examined genes. This indicates that the D3-region is unsuitable for resolving ancient splits in oribatid mites.     

Assessment of phytochemical and genetic diversity analysis of Plumbago zeylanica L. accessions

Genetic Resources and Crop Evolution - Selection of elite accessions is important to get the maximum quantity of bioactive compounds in medicinal plants. In this study, thirteen accessions...     

Trends of Air Pollution and Its Present Situation in Hiroshima Prefecture

The ambient concentration of SO₂, NOx and O_x in the atmosphere of Hiroshima, Fukuyama and Fuchu city which were monitored by the prefectural monitoring stations, are examined to give a picture of the typical air pollution at these sites. Results show that the yearly concentrations of SO₂ in these areas are significantly fall from 20 to 6 ppb during 1978–1996 when the NOx concentrations having no such significant change which varies from 40 to 30 ppb. The Photo-chemical Oxidant (Ox) increases annually at the rate of 0.3 ppb to 0.6 ppb in Hiroshima city only. To know the present situation of air pollution the Differential Optical Absorption Spectroscopy (DOAS) system is used in the city of Higashi Hiroshima. The daily average concentrations of SO₂, NO₂, O₃ and HONO measured during the period of August 1999 to March 2000 ranged from 1.4 ppb to 2.8 ppb, 13 ppb to 26.9 ppb, 21 ppb to 53.6 ppb and 1 ppb to 4.3 ppb respectively. The patterns of concentrations of NO₂ and O₃ measured by DOAS look similar to the seasonal patterns of NOx and Ox by the conventional system.     

δ34S variations in vegetation and soil exposed to intense biogenic sulphide emissions near Paige mountain,N.W.T., Canada

Sulphur isotope abundances demonstrate that natural emissions of biogenic H₂S and its oxidation products from springs near Paige Mountain, N.W.T., Canada, can be incorporated into surrounding soil and vegetation. δ³⁴S values as low as ? 33‰ for soil and vegetation are the result of dominant uptake of biogenic atmospheric compounds. In contrast, vegetation on a gypsum outcrop remote from the springs, has δ³⁴S values as high as + 26‰ indicating nearly exclusive derivation of S from the soil. Near the springs, soil with vegetative cover is less depleted in ³⁴S than soil lacking cover. Lower needles on a Black Spruce were found to be less depleted in ³⁴S than the upper needles. These observations suggest that upper foliage exerts a canopy effect on lower foliage and in turn, interception by vegetation reduces the flux of atmospheric S compounds to the soil. Clearly, natural emissions of S compounds can interfere in studies of long range transport of industrial emissions; S isotope analyses might identify such interferences and reduce the chance of misinterpretation.     

Genomic variations and antigenic relationships among cytopathic rotavirus strains isolated in Quebec dairy herds.

Twelve isolates of bovine rotavirus, originating from eight dairy herds in Quebec known to have frequent epizootics of diarrhea in young calves in the last five years, were successfully propagated in cell cultures. The 12 isolates produced clear-cut plaques in BSC-1 cells and, except for one isolate, agglutinated human group "O" erythrocytes to an higher titer than bovine erythrocytes. Antisera to each isolate were produced in rabbits and used to study their antigenic relationships. All the isolates shared the group-specific immunofluorescent antigen and were antigenically related as demonstrated by the seroneutralization and hemagglutination-inhibition tests. However, the relationships to the Nebraska rotavirus was quite weak in cases of two Quebec isolates. When the genomes of the various isolates were compared by polyacrylamide gel electrophoresis, at least three different reproducible fractionation patterns could be identified.