Proteome-determined type-specific proteins of Mycobacterium avium subspecies paratuberculosis

Mycobacterium avium subspecies paratuberculosis (M. a. paratuberculosis) is a pathogen of ruminants, causing paratuberculosis (characterized by severe emaciation). The disease is endemic in many countries including the UK and places a severe economic burden on the global livestock industry. Two types of M. a. paratuberculosis can be classified by pulsed-field electrophoresis (I/III and II), which are phenotypically distinct and appear to have different host preferences. Proteomes of Type I and Type II M. a. paratuberculosis were analyzed by 2-D gel electrophoresis to determine if any significant differences existed between the subtypes. Seven different strains of Type I and 18 strains of Type II were analyzed and compared to detect type-specific differences. These 'type-specific' differences existed regardless of growth phase and were also exhibited in cells isolated directly from pathogenic lesions. Twenty-three spots predominated on the Type I profile, from which 17 proteins were identified. Twenty-one spots predominated on the Type II profile, from which 16 proteins were identified. None of the proteins identified as differentially represented on the profiles of Type I or Type II corresponded to open reading frames of the defining genomic regions as previously described for the Type I (sheep) and Type II (cattle). Sequence polymorphisms existing in Type I and II strains were identified in some open reading frames or regulatory regions of genes that correspond to proteins expressed in a type-specific fashion. The consequence of these is discussed in relation to protein expression and their impact on the type phenotype is discussed.     

Soil degradation and mitigation in agricultural lands in the Indian Anthropocene

Current widespread and intensive soil degradation in India has been driven by unprecedented levels of population growth, large-scale industrialization, high-yield agriculture, urban sprawl and the spread of human infrastructure. The damage caused to managed and natural systems by soil degradation threatens livelihoods and local services and leads to national socio-economic disruption. Human-induced soil degradation results from land clearing and deforestation, inappropriate agricultural practices, improper management of industrial effluents and wastes, careless management of forests, surface mining, urban sprawl, and ill-planned commercial and industrial development. Of these, inappropriate agricultural practices, including excessive tillage and use of heavy machinery, over-grazing, excessive and unbalanced use of inorganic fertilizers, poor irrigation and water management techniques, pesticide overuse, inadequate crop residue and/or organic carbon inputs, and poor crop cycle planning, account for nearly 40% (121 Mha) of land degradation across India. Globally, human activities related to agriculture contribute to the transgression of four of the nine Planetary Boundaries proposed by Rockström et al. (2009): Climate Change, Biodiversity Integrity, Land-system Change, and altered Phosphorus and Nitrogen Biogeochemical Flows. This review focuses on how knowledge of soil processes in agriculture has developed in India over the past 10 years, and the potential of soil science to meet the objectives of the United Nations' Sustainable Development Goal 2: Zero Hunger (End hunger, achieve food security, improved nutrition and promote sustainable agriculture), using the context of the four most relevant Planetary Boundaries as a framework. Solutions to mitigate soil degradation and improve soil health in different regions using conservation agricultural approaches have been proposed. Thus, in this review we (1) summarize the outputs of recent innovative research in India that has explored the impacts of soil degradation on four Planetary Boundaries (Climate Change, Biodiversity Loss, Land-system Change, and altered Biogeochemical Flows of Phosphorus and Nitrogen) and vice-versa; and (2) identify the knowledge gaps that require urgent attention to inform developing soil science research agendas in India, to advise policy makers, and to support those whose livelihoods rely on the land.     

Laparoscopic cauterisation of the testicular arteries to manage haemoperitoneum in a gelding

A Thoroughbred gelding had chronic episodic intra‐abdominal haemorrhage following standing castration, presumed to originate from a testicular artery. No coagulopathy could be detected and resolution of haemorrhage was achieved by laparoscopic electrocoagulation of both testicular arteries 6 weeks after castration. Blood drained from the abdomen during surgery was filtered then auto‐transfused. Post operative complications included pigmenturia, incisional pain and large colon impaction.     

Soil loss tolerance limits for planning of soil conservation measures in Shivalik–Himalayan region of India

Soil loss tolerance limit is defined as the threshold upper limit of soil erosion that can be allowed without degrading long term productivity of specific soils. In India a default soil loss tolerance limit (SLTL) of 11.2 Mg ha^− 1 yr^− 1 is followed for planning soil conservation activities. The objective of this investigation is to provide a methodology to estimate quantitative SLTL for the Shivalik–Himalayan region in India for suggesting suitable soil conservation measures. A quantitative model was used to integrate potential soil indicators such as infiltration rate, bulk density, water stable aggregate, organic carbon and fertility status to assess soil quality governing soil resistibility to erosion. Scaling functions were used to convert soil parameters to unit less 0 to 1 scale. Normalized values of soil parameters were then multiplied by assigned weights based on relative importance and sensitivity analysis of each indicator. Soils were grouped into 1, 2 and 3 depending on overall additive score. A general guideline developed by the USDA-Natural Resource Conservation Service (NRCS) was followed with certain modifications in depth category for estimation of SLTLs. Soil loss tolerance limits varied from 2.5 to 12.5 Mg ha^− 1 yr ^− 1 compared to single value of 11.2 Mg ha^− 1 yr ^− 1 being followed earlier. Consideration of the newly estimated SLTLs would facilitate site specific conservation planning and prioritising areas for watershed management activities in India.     

Behavioral and physiological evaluation of sows raised in outdoors systems in the Brazilian semiarid region

Tropical Animal Health and Production - The objective of this study was to evaluate the biochemical, behavioral, and physiological parameters in pregnant sows of native and improved crossbreeds...     

Effect of different feeds on the growth,survival and reproductive performance of zebrafish,Danio rerio (Hamilton, 1822)

Present experiment was conducted to determine the effect of different feeds with varying protein levels on the growth, survival and reproductive performance of zebrafish, Danio rerio. The control diet (T1) was wild‐collected zooplankton from local fish ponds, while test diets with 350 g kg^?1 protein (T2), 400 g kg^?1 protein (T3) and 450 g kg^?1 protein (T4) were formulated and fed to fish for a period of 210 days. The significantly (P < 0.05) highest mean weight gain and specific growth rate were observed in T1, which were similar with T3 and T4. The significantly (P < 0.05) highest number of egg production per female and relative fecundity were found in T1, followed by T4 and T3 while T2 produced lowest number of eggs. No significant (P > 0.05) differences were observed in brood survival rate, fertilization and hatching rate among the dietary treatments. The highest (P < 0.05) fry survival rate was recorded in T1, followed by T3 and T4. Thus, it is suggested that control diet i.e. mixed zooplankton exhibited better growth, reproductive performance and fry survival rate. However, diet containing 400 g kg^?1 crude protein also gave comparable results in terms of growth, survival and reproductive performance of zebrafish.     

Effect of irrigation and nitrogen application methods on input use efficiency of wheat under limited water supply in a Vertisol of Central India

Field experiments were conducted in a deep Vertisol at the Indian Institute of Soil Science, Bhopal during the years 2001–2005 to assess the effect of five different irrigation strategies through combinations of sprinkler and flood irrigation and two N application methods on yield and water use efficiency of wheat (cv WH 147). The amount of irrigation applied each year differed according to the availability of water in the water harvesting pond to simulate the actual water crisis faced by the farmers in this region during these years due to monsoon failure. Results indicated that when wheat was grown only with 8-cm irrigation at sowing or 14 cm up to the crown root initiation stage, dry sowing of wheat immediately followed by sprinkler and subsequent irrigation through flooding produced the highest yield and water and nitrogen use efficiencies. However, when 20-cm irrigation was supplied up to the flowering stage or 14-cm irrigation was supplied up to tillering stage through sprinkler in 4 and 3 splits, respectively, at critical growth stages, maximized the grain yield and water and nitrogen use efficiencies. Across the years, the crop yield and water and nitrogen use efficiencies increased with increase in water supply.