Detection of salmonellae from fish in a natural river system

Sediment, water, and fish gut samples taken at three sites near the headwaters of the San Marcos River, Texas, were analyzed for salmonellae Salmonella spp. by culture and molecular techniques. While enrichment cultures from sediment and water samples from the two uppermost sites were negative for salmonellae in polymerase chain reaction analyses, both sediment and water samples were positive at the downstream site. At all sites, salmonellae were present in the guts of different fishes (e.g., largemouth bass Micropterus salmoides, channel catfish Ictalurus punctatus, common carp Cyprinus carpio, and suckermouth catfish Hypostomus plecostomus). The highest percentage of detection (33% of analyzed fish) occurred at the downstream site, whereas detection percentages at the upper two sites were 18% and 17%. Detection of salmonellae was usually limited to one segment of the gut (i.e., upper or lower part). Serovars were highly variable among individuals and differed between the upper and lower gut in the only individual (a common carp) that had salmonellae in both gut segments. In situ hybridization demonstrated that salmonellae were normally associated with particulate material in the gut and occurred in highly variable numbers ranging from an occasional organism to a majority of the gut microbe population. These results demonstrate the presence of different serovars of potentially human pathogenic salmonellae among four ecologically distinct fishes within natural environments. They also suggest that salmonellae are not components of the indigenous microbial community in fish intestines but rather are ingested with particulate material.     

Substrate quality and the temperature sensitivity of soil organic matter decomposition

Determining the relative temperature sensitivities of the decomposition of the different soil organic matter (SOM) pools is critical for predicting the long-term impacts of climate change on soil carbon (C) storage. Although kinetic theory suggests that the temperature sensitivity of SOM decomposition should increase with substrate recalcitrance, there remains little empirical evidence to support this hypothesis. In the study presented here, sub-samples from a single bulk soil sample were frozen and sequentially defrosted to produce samples of the same soil that had been incubated for different lengths of time, up to a maximum of 124 days. These samples were then placed into an incubation system which allowed CO₂ production to be monitored constantly and the response of soil respiration to short-term temperature manipulations to be investigated. The temperature sensitivity of soil CO₂ production increased significantly with incubation time suggesting that, as the most labile SOM pool was depleted the temperature sensitivity of SOM decomposition increased. This study is therefore one of the first to provide empirical support for kinetic theory. Further, using a modelling approach, we demonstrate that it is the temperature sensitivity of the decomposition of the more recalcitrant SOM pools that will determine long-term soil-C losses. Therefore, the magnitude of the positive feedback to global warming may have been underestimated in previous modelling studies.     

Extraction and Activation of Wheat Polyphenol Oxidase by Detergents: Biochemistry and Applications

Polyphenol oxidases (PPOs) from several plant species, including wheat, have been implicated in undesirable brown discolorations of food products. It has been demonstrated that these enzymes are often present in a latent form or are membrane‐associated, necessitating detergent or other treatments to obtain fully active preparations. Here, the influence of different detergents on wheat meal and flour PPOs was investigated. Extraction in presence of 50 mM SDS led to a 5‐ to 15‐fold increase in PPO activity, making quantitative assays in flour from low‐PPO lines more robust. Among a series of additional nonionic, anionic, and cationic detergents tested, only n ‐lauroylsarcosine increased extractable PPO activity to a degree comparable to that of SDS. Additional experiments suggested that a large fraction of wheat meal PPOs may be membrane‐associated and that SDS is able to activate PPOs extracted from high‐activity but not from low‐activity wheat lines. PPO activities assayed after SDS extraction of meal and flour were highly correlated with each other and with activity determined in whole (intact) kernels in absence of SDS. Correlation coefficients between PPO activities measured with all these methods and noodle brightness were about equal, indicating that activities assayed after SDS extraction are useful for germplasm screening and quality prediction.