The phenotypic characteristics and relational database for Vietnamese native pig populations

Although there are a number of Vietnamese native pig (VnP) populations, some are on the verge of extinction, and therefore adequate management and conservation are necessary. In this study, we conducted a field survey of VnP populations and analyzed interrelationships among their characteristics. We also established a relational database for management of field data on these populations. For data collection, we conducted interviews with farmers and visual inspection of 32 VnP populations in 22 provinces of Vietnam, as well as taking photographs of individual animals. Data on the characteristics of VnP populations were subjected to multiple correspondence analysis (MCA). For establishment of the database, normalization and table partitioning were performed to eliminate redundancy and ensure consistency of the collected data items. Passport data, characteristics data, and image data were collected from a total of 1,918 VnPs and entered as a normalized table. Upon MCA, most of the populations were not separated from each other, but the Mong Cai, O Lam, and Chu Prong populations were separated from the other populations. Thus, we have constructed a relational database from comprehensive information on the characteristics of VnP populations.     

A soft technology to improve survival and reproductive performance of Litopenaeus stylirostris by counterbalancing physiological disturbances associated with handling stress

The consequences of handling stress (fishing, transfer, eyestalk ablation) on shrimp broodstock are poorly documented. The weakness of farmed shrimp, Litopenaeus stylirostris, during winter is a major problem in New Caledonia, because of seasonal climate (tropical–sub-temperate). The transfer of broodstock in winter from earthen outdoor ponds to indoor maturation tanks in the hatchery (T = 20 °C, Salinity = 35‰, fed shrimp) usually leads, after 48 h, to high mortality (up to 70%). Eyestalk ablation to induce ovarian maturation in females leads to further mortality.

Starting from a background analysis of physiological disturbances (initial osmoregulatory imbalance) associated with handling stress (Wabete, N., Chim, L., Lemaire, P., Massabuau, J.-C., 2004. Caractérisation de problèmes de physiologie respiratoire et d'échanges ioniques associés à la manipulation chez la crevette pénéide Litopenaeus stylirostris à 20 °C. Styli 2003. Trente ans de crevetticulture en Nouvelle-Calédonie. Ed. Ifremer. Actes Colloq. 38, 75-84.), we developed a protocol using a soft technology, based on modifications of water salinity, temperature and feeding regime. The aim was to minimize problems of osmoregulatory imbalance and associated mortalities. The protocol we developed, called the LSD OT protocol (Low Salinity and Diet, Optimal Temperature), was first evaluated on sub-adult shrimp (20–25 g) and then applied to broodstock. Survival after transfer and following eyestalk ablation, as well as reproductive achievement (spawning rate, nauplii number) was considerably improved when shrimps were transferred under “physiological comfort” i.e. warmed isosmotic water (26 °C and 26‰) and unfed for 3 d. This new handling protocol, based on a better control of salinity, temperature and feeding conditions, has been transferred successfully to private hatcheries and already contributes to an increased profitability of New-Caledonian shrimp industry.     

Effect of foliar application of oligochitosan with different molecular weight on growth promotion and fruit yield enhancement of chili plant

Oligochitosan (OC) is effective biostimulant on growth promotion and elicitation against disease infection for plants. However, the range of OC molecular weight that exhibits the most effective activity is not fully understood and requires further investigation. In this study, OCs with different weight average molecular weight (Mw) were prepared by gamma Co-60 irradiation degradation of chitosan in solution and the effect on growth promotion and enhancement of fruit yield of chili plant (Capsicum frutescens L.) by foliar application of OCs particularly with Mw of 7.8, 5.0, and 2.5 kDa was investigated. Chili plants, cultivated in a greenhouse were sprayed with OC concentration of 50 mg/L for three times. Results indicated that among treatments, OC with 2.5 kDa proved to be the best, which increased the shoot fresh weight by 71.5%, shoot dry weight by 184%, total chlorophyll content by 12%, and fruit fresh weight by 49.8% for the control. Thus, OC with low Mw (2.5 kDa) that can be suitably produced on large scale by gamma Co-60 ray irradiation degradation of chitosan solution is potentially promising to apply as a biostimulant to enhance chili fruit yield significantly.     

Discoloration induced by Raffaelea quercivora isolates in Quercus serrata logs and its relation to phylogeny: a comparison among isolates with and without the Japanese oak wilt incidence including outside of Japan

Japanese oak wilt (JOW) has been prevalent in Japan since the late 1980s. Infections of the fungus, Raffaelea quercivora Kubono et Shin. Ito, which is transmitted by an ambrosia beetle [Platypus quercivorus (Murayama)], can cause JOW. Although R. quercivora, P. quercivorus, and oak trees are distributed in other Asia–Pacific countries, the incidence of JOW has not been reported outside Japan. In this study, we collected R. quercivora isolates from 5 Asian countries, including Japan, and compared their ability to induce sapwood discoloration by inoculating Q. serrata logs. The tangential widths of the discoloration in sapwoods inoculated with non-Japanese isolates were equivalent to or greater than those of the 2 Japanese isolates. This indicates that a lack of JOW incidence outside Japan is not because of the lowered ability of R. quercivora to spread discoloration compared with the Japanese isolates. Statistical analyses of the relationship between discoloration and phylogeny based on DNA sequences of actin and chitin synthase showed that the discoloration width was independent of phylogenetic relatedness among the isolates. To discuss why the occurrence of JOW has not been reported outside Japan, further studies (e.g., on host susceptibility and P. quercivorus aggression) throughout Asia are needed.     

Spatial and temporal diversity of fish captured by light traps in various habitats in coastal waters in the oldest marine protected area in Vietnam and its implications for conservation

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Changes in fineroot growth dynamics in response to phosphorus application in an Acacia mangium plantation in Vietnam

Fineroots (≤ 2 mm diameter) are dynamic components of the forest ecosystems and play important role in water and nutrient acquisition in forests. These roots are sensitive to forest fertilization and therefore, the response of fineroots to nutrient application would provide better understanding of the forest carbon and nutrient dynamics that will be helpful in sustainable forest management plans. Two fertilization treatments, including (1) F400: 400 g P₂O₅ (16.5%)/tree and (2) F600: 600 g P₂O₅ /tree, and F0: control (without fertilization), were applied in an Acacia mangium plantation with a planting density of 1100 trees/ha (3 m?×?3 m). The evaluation of fineroot growth across seasons showed that fertilization significantly increased production and subsequent mortality and decomposition. The total decomposition associated with F600 application was 7.95 tons ha^?1 year^?1, equaling 121% of F400 and 160% of the control. Mortality in F600 was 8.75 tons ha^?1 year^?1, equaling 111% of F400 and 198% of F0, while production in F600 was 10.40 tons ha^?1 year^?1, equaling 127% of F400 and 143% of F0. Fineroot production, mortality, and decomposition are seasonally dependent, with higher values measured in the rainy season than in the dry season. Stand basal area increment was significantly correlated with fineroot production (R²?=?0.75), mortality (R²?=?0.44), and decomposition (R²?=?0.48). This study showed that fertilization could facilitate fineroot production, which can then lead to a higher turnover of carbon and nutrients through the decomposition of the greater mass of the fineroots.

     

Effects of heat tolerance on expression of resistance toPresudomonas solanacearum E. F. Smith in potato

Summary Twelve potato clones with different genetic background for resistance to bacterial wilt and adaptation were tested for resistance to a race 1 and a race 3 isolate of the pathogen at three locations in the Philippines representing different ranges of ambient temperature. The results showed that the genes for heat tolerance are crucial for resistance. Stability analysis indicated that clones with both resistance and heat tolerance genes displayed higher and more stable resistance to the race 1 isolate than those clones having only resistance genes. The latter group tended to have higher values of both regression of disease index on environmental index and deviation from the regression in the stability analysis. Host — pathogen interaction effects were found to be statistically significant but small compared to main effects of isolates and clones. The involvement of genes with different effects on wilt resistance is discussed. Introduction     

Factors impacting yields in rain-fed paddies of the lower Mekong River Basin

The Mekong River Basin (MRB) is the biggest basin in Monsoon Asia. About 80% of the agricultural lands, which occupy about 40% of the basin are rain-fed paddy rice area. Therefore, it is assumed that changes in rain-fed paddy rice production affect the total agricultural production to a great degree in the Mekong River Basin. While there are many factors affecting the productivity of rain-fed paddies, such as climate, water use, rice varieties, applications of manure, fertilizer and agro-chemicals, sowing date and other agronomic practices, this paper focuses on the relation between rainfall and yields of rain-fed paddies. Agricultural statistics and rainfall data were collected and analyzed for all 24 provinces in Cambodia for the years 2001 and 2002. Factors such as soil fertility and other natural conditions were removed by comparing the yield and rainfall in one province for different years. Special attention was given to the relation between yields of paddy in the wet season and rainfall, considering factors such as rice varieties, soil fertility, irrigation ratio and the ratio of area damaged by flood, drought, and insect. Although it is not easy to assess those impact factors on yields because they are organically interactive, the following results were obtained: (1) The ratio of high yielding varieties (HYV), soil fertility, and irrigation ratio among many factors that affect yields individually, especially if they are combined, (2) Total rainfall did not have a significant influence on rice yields even for the rain-fed paddies if it was over 700 mm in wet season, and one of the reasons for this would be that there exist supplementary water uses through small ponds and water ponding in local land depressions in and around paddies.     

Assessment of genetic diversity and population structure of Vietnamese indigenous cattle populations by microsatellites

Cattle play a very important role in agriculture and food security in Vietnam. A high level of cattle diversity exists and serves different needs of Vietnamese cattle keepers but has not yet been molecularly characterized. This study evaluates the genetic diversity and structure of Vietnamese indigenous cattle populations, using microsatellite markers. A total of 410 individuals from six indigenous cattle populations and an exotic breed was characterized using 27 microsatellite markers A total of 362 alleles was detected and the number of alleles per locus ranged from 8 (INRA005 and ILSTS005) to 17 (ETH185). The level of gene diversity was high indicated by a mean expected heterozygosity (He) across populations and loci of 0.73. Level of inbreeding (mean F_IS=0.05) and genetic differentiation (mean F_ST=0.04) was moderate. The phylogenetic tree based on Reynolds genetic distance reflected geographic distances. Structure analysis indicated five homogeneous clusters. The Brahman, Lang Son, Ha Giang and U Dau Riu cattle were assigned to independent clusters while Nghe An, Thanh Hoa and Phu Yen cattle were grouped in a single cluster. We conclude that Vietnamese indigenous cattle have high levels of genetic diversity and distinct genetic structures. Based on these results, we recommend that for conservation homogenous populations (Nghe An, Thanh Hoa and Phu Yen) can be grouped to reduce costs and U Dau Riu, Lang Son and Ha Giang populations should be conserved separately to avoid loss of genetic diversity.