Axle-less F1-ATPase rotates in the correct direction

F1-adenosine triphosphatase (ATPase) is an ATP-driven rotary molecular motor in which the central gamma subunit rotates inside a cylinder made of three alpha and three beta subunits alternately arranged. The rotor shaft, an antiparallel alpha-helical coiled coil of the amino and carboxyl termini of the gamma subunit, deeply penetrates the central cavity of the stator cylinder. We truncated the shaft step by step until the remaining rotor head would be outside the cavity and simply sat on the concave entrance of the stator orifice. All truncation mutants rotated in the correct direction, implying torque generation, although the average rotary speeds were low and short mutants exhibited moments of irregular motion. Neither a fixed pivot nor a rigid axle was needed for rotation of F1-ATPase.     

Glutathione functions on physiological characters to increase copper-induced corn production

Glutathione (GSH) abundantly presents in plant and affects plants growth and development. To justify if GSH affects copper (Cu)-induced corn production, photosynthesis (Pn) rate, and photosynthetically active radiation (PAR), chlorophyll (Chl) content and Chl fluorescence, relative water content (RWC) and yields were evaluated. Different Cu concentrations (0, 0.2, 1.5 and 3.0 ppm of Zn) with or without 100 µm of N-acetyl cysteine (NAC) were arranged as completely randomize design with 5 replications. Results showed that both NAC and Cu affected plant height and leaf numbers. Copper reduced Pn rate, and PAR and increased RWC but no effect was observed on Chl content and Chl fluorescence in leaves. On the other hand, NAC application increased Pn, PAR, Chl parameters regardless of Cu treatment. In the presence of 1.5 ppm of Cu, corn plants showed improve yield and cob length irrespective to NAC treatment. Taken together, this study suggests that NAC might improve some physiological functions in plants to enhance Cu-induced corn production.     

Analysis of methanogenic archaeal communities of rumen fluid and rumen particles from Korean black goats

Molecular diversity of methanogens in the rumen of Korean black goats was investigated with 16S rRNA gene clone libraries using methanogen‐specific primers. The libraries were composed of rumen fluid‐associated methanogens (FAM) and rumen particle‐associated methanogens (PAM) from rumen‐fistulated Korean black goats. Among the 141 clones of the FAM library, the sequences were mostly related to two phyla, the Methanobacteriaceae family (77.3%) and the Thermoplasmatales family (22.7%); and among the 68 clones of the PAM library, sequences were also mainly clustered in the two phyla, the Thermoplasmatales family (63.24%) and the Methanobacteriaceae family (35.29%). Most of the sequenced clones in the two libraries were closely related to uncultured methanogenic archaeon. Quantitative real‐time PCR revealed that PAM (8.97 log 10) had significantly higher (P < 0.01) density of methanogens by the methanogenic 16S rRNA gene copies than FAM (7.57 log 10). The two clone libraries also showed difference in Shannon index (FAM library 1.70 and PAM library 1.59) and Chao 1 estimator (FAM library 18 and PAM library 17 operational taxonomic units). Apparent differences found in the microbial community from the two 16S rRNA gene libraries could be a result of such factors as the chemical and physical nature of the target material surface, types or component of diets, the interaction between the methanogens and other microbes, and age of the experimental goats.     

Insecticidal activity of Arum maculatum tuber lectin and its binding to the glycosylated insect gut receptors

Mannose binding approximately 50 kDa homotetrameric lectin, purified from edible Arum maculatum tuber, was analyzed through SDS-PAGE and studied for its agglutination property using rabbit erythrocytes. Cross reactivity of the purified lectin was verified through western blot using Colocasia esculantum(Family, Araceae) tuber lectin antibody. The insecticidal activity of Arum maculatum tuber lectin (ATL) was tested against two economically important sucking pests, Lipaphis erysimi and Aphis craccivora, in an artificial diet. The LC(50) values for L. erysimi and A. craccivora were determined to be 21 microg/mL and 16 microg/mL, respectively. Addition of alpha-d-mannose in ATL-supplemented diet reduced the aphid mortality. Two major receptor proteins of ATL (approximately 40 kDa and approximately 35 kDa) were detected from the brush border membrane vesicle (BBMV) protein of L. erysimi and A. craccivora guts, respectively, using ligand-binding assay. Alpha-d-Mannose was found to be a deterrent to such binding of ATL to the BBMV receptors.     

Effect of 3-O-octanoyl-(+)-catechin on the responses of GABA(A) receptors and Na+/glucose cotransporters expressed in xenopus oocytes and on the oocyte membrane potential

Recently, 3-O-octanoyl-(+)-catechin (OC) was synthesized from (+)-catechin (C) by incorporation of an octanoyl chain into C in the light of (-)-epicatechin gallate (ECg) and (-)-epigallocatechin gallate (EGCg), which are the major polyphenols found in green tea and have strong physiological activities. OC was found to inhibit the response of ionotropic gamma-aminobutyric acid (GABA) receptors (GABA(A) receptors) and Na+/glucose cotransporters expressed in Xenopus oocytes in a noncompetitive manner more strongly than does C. OC also induced a nonspecific membrane current and decreased the membrane potential of the oocyte, and thus death of the oocyte occurred even at lower concentrations than that induced by C or EGCg. Although EGCg produced H2O2 in aqueous solution, OC did not. This newly synthesized catechin derivative OC possibly binds to the lipid membrane more strongly than does C, Ecg, or EGCg and as a result perturbs the membrane structure.     

Optimization of Compatible Mixed Cultures for Liquid State Bioconversion of Municipal Wastewater Sludge

The filamentous fungal strains such as Penicillium corylophilum (P), Aspergillus niger (A), Trichoderma harzianum (T) and Phanerochaete chrysosporium (PC) isolated from its relevant sources (wastewater, sewage sludge and sludge cake) were selected for compatible/incompatible mixed cultures. Six combinations of P. corylophilum and A. niger (P/A); P. corylophilum and P. chrysosporium (P/PC); P. corylophilum and T. harzianum (P/T); A. niger and T. harzianum (A/T); A. niger and P. chrysosporium (A/PC); T. harzianum and P. chrysosporium (T/PC) were used to evaluate their potential performance as compatible/incompatible mixed culture for the treatment of municipal wastewater sludge in a bioconversion process. The results of the present study showed that the combinations of P/A, P/PC and A/PC showed compatible growth and the rest of the combinations (P/T, A/T and T/PC) were incompatible cultures. A maximum production of dry biomass and dry filter cake were recorded in the compatible mixed culture of P. corylophilum and A. niger (P/A). A maximum reduction of COD (90%) and a decreased filtration time of treated sludge was observed in the case of P/A microbial mixed culture. The pH value was also affected by the fungal cultures. Effective results were observed by using microbial mixed culture after four days of treatment compared to other treatments (2 and 6 days).     

Efficiency and Flow Regime of a Highway Stormwater Detention Pond in Washington, USA

Wet detention ponds are a preferable alternative in treating stormwater runoff. Literature suggests that a detention pond’s efficiency in removing principal pollutants of concern, TSS and metals, is highly variable and is affected by a complex array of factors including its geographic location. The objective of this paper was to investigate the TSS and metal removal efficiency of a highway stormwater detention pond in Spokane, Washington along with its flow regime. Pond influent and effluent data for TSS and metal were collected for approximately two years. TSS removal by the pond was found to be 68.1–99.4% with an average of 83.9%. Average metal removal efficiency was 54.7–64.6% which is 72.5–86.9% of the TSS removal. The pond’s flow regime was found to vary with its changing surface topography, a result of sedimentation of suspended solids.     

Maceration of plant tissue by fungi is inhibited by recombinant antipectinase antibodies

Polyclonal antiserum from mice immunized with extracellular proteins from Rhizoctonia solani inhibited pectinase and cellulase activities in cell free culture supernatants of Rhizoctonia solani. Spleen mRNA from these mice was used to construct a cDNA library from which antipectinase ScFv antibodies were isolated using phage display techniques. Soluble ScFv antibodies produced by individual clones in Escherichia coli inhibited polygalacturonase in the culture supernatants of a range of fungal pathogens, including ascomycetes, basidiomycetes, and oomycetes. The soluble antibodies also inhibited maceration of potato tissue by these pathogens.     

Antagonistic rhizoplane bacteria induce diverse morphological alterations in Peronosporomycete hyphae during <Emphasis Type="Italic">in vitro</Emphasis> interaction

A total of 150 bacteria were isolated from rhizoplanes of the host and non-host plants of a phytopathogenic Peronosporomycete Aphanomyces cochlioides. Upon screening, 5% of the isolates were evaluated as antagonists as they inhibited radial growth of A. cochlioides AC-5 hyphae in a dual culture assay. In addition, those antagonistic bacteria also induced characteristic morphological alterations in the A. cochlioides AC-5 hyphae that grew towards bacterial colonies. Hyphal morphological alterations observed in AC-5 and other tested strains of Peronosporomycetes included excessive branching, curly growth, unusually longer and pointed tip formation and swelling; all of these were comparable to the alterations induced by known antimicrobial compounds. Among the antagonistic bacteria, Pseudomonas sp. strain EC-S101 induced a unique branching pattern (tree-like) in AC-5 hyphae by continuous apical bifurcation of successive hyphae, where increases in number of branches and hyphal area were linearly correlated with time up to 10 h. Our observations suggested that the pathogen might have lost its ability of normal branch production; however maintained the capability of self-branching. Soluble extracts from the culture fluids of Pseudomonas sp. strain EC-S101 and Stenotrophomonas maltophilia EC-S105 induced similar excessive branching and curly growth in A. cochlioides hyphae as the respective bacterium. These results revealed that bacterial metabolites appeared to be responsible for induction of morphological alterations. Interestingly, the antagonistic bacteria that induced hyphal morphological alterations, also efficiently suppressed in vivo damping-off disease caused by AC-5. We suggest that antagonistic rhizoplane bacteria have the capability to induce diverse morphological alterations in Peronosporomycetes hyphae during in vitro interactions. Hyphal morphological alterations associated with growth inhibition and the induction of characteristic morphological changes indicate antagonistic activity against the Peronosporomycete.