Isolation and characterization of a Mn(II)-oxidizing Bacillus strain from the demosponge Suberites domuncula

In this study we demonstrate that the demosponge Suberites domuncula harbors a Mn(II)-oxidizing bacterium, a Bacillus strain, termed BAC-SubDo-03. Our studies showed that Mn(II) stimulates bacterial growth and induces sporulation. Moreover, we show that these bacteria immobilize manganese on their cell surface. Comparison of the 16S rDNA sequence allowed the grouping of BAC-SubDo-03 to the Mn-precipitating bacteria. Analysis of the spore cell wall revealed that it contains an Mn(II)-oxidizing enzyme. Co-incubation studies of BAC-SubDo-03 with 100 μM MnCl(2) and >1 μM of CuCl(2) showed an increase in their Mn(II)-oxidizing capacity. In order to prove that a multicopper oxidase-like enzyme(s) (MCO) exists in the cell wall of the S. domuncula-associated BAC-SubDo-03 Bacillus strain, the gene encoding this enzyme was cloned (mnxG-SubDo-03). Sequence alignment of the deduced MCO protein (MnxG-SubDo-03) revealed that the sponge bacterium clusters together with known Mn(II)-oxidizing bacteria. The expression of the mnxG-SubDo-03 gene is under strong control of extracellular Mn(II). Based on these findings, we assume that BAC-SubDo-03 might serve as a Mn reserve in the sponge providing the animal with the capacity to detoxify Mn in the environment. Applying the in vitro primmorph cell culture system we could demonstrate that sponge cells, that were co-incubated with BAC-SubDo-03 in the presence of Mn(II), show an increased proliferation potential.     

Antimicrobial and Antimycobacterial Activity of Cyclostellettamine Alkaloids from Sponge Pachychalina sp.

Cyclostellettamines A – F (1 – 6) isolated from the sponge Pachychalina sp. and cyclostellettamines G - I, K and L (7 – 11) obtained by synthesis were evaluated in bioassays of antimicrobial activity against susceptible and antibiotic-resistant Staphylococcus aureus, Pseudomonas aeruginosa and antibiotic-susceptible Escherichia coli and Candida albicans, as well as in antimycobacterial activity against Mycobacterium tuberculosis H37Rv bioassays. The results obtained indicated that cyclostellettamines display different antimicrobial activity depending on the alkyl-chain size, suggesting that, if a mechanism-of action is implied, it is dependent on the distance between the two pyridinium moieties of cyclostellettamines.     

Pesticide exposure assessment for surface waters in the EU. Part 1: Some comments on the current procedure

In 2001, the European Commission introduced a risk assessment project known as FOCUS (FOrum for the Coordination of pesticide fate models and their USe) for the surface water risk assessment of active substances in the European Union. Even for the national authorisation of plant protection products (PPPs), the vast majority of EU member states still refer to the four runoff and six drainage scenarios selected by the FOCUS Surface Water Workgroup. However, our study, as well as the European Food Safety Authority (EFSA), has stated the need for various improvements. Current developments in pesticide exposure assessment mainly relate to two processes. Firstly, predicted environmental concentrations (PECs) of pesticides are calculated by introducing model input variables such as weather conditions, soil properties and substance fate parameters that have a probabilistic nature. Secondly, spatially distributed PECs for soil–climate scenarios are derived on the basis of an analysis of geodata. Such approaches facilitate the calculation of a spatiotemporal cumulative distribution function (CDF) of PECs for a given area of interest and are subsequently used to determine an exposure concentration endpoint as a given percentile of the CDF. For national PPP authorisation, we propose that, in the future, exposure endpoints should be determined from the overall known statistical PEC population for an area of interest, and derived for soil and climate conditions specific to the particular member state. © 2016 Society of Chemical Industry     

Optimising magnetic resonance image quality of the ear in healthy dogs

The aim of this study was to develop an examination protocol for magnetic resonance imaging, in order to display diagnostically important information of the canine middle and inner ear. To ensure that this protocol could also be used as a basis for determining pathological changes, the anatomical structures of the ear were presented in detail. To minimise stress through anaesthesia in live animals, preliminary examinations were carried out on four dog cadavers. During these initial examinations, three-dimensional (3D) sequences proved to be superior to two-dimensional ones. Therefore, only 3D sequences were applied for the main examinations performed on six clinically healthy Beagles. The anonymised MR images were rated by three experienced reviewers using a five-point scale. The most valuable sequence was a T2-weighted CISS sequence (TR = 16.7 ms, TE = 8.08 ms). This sequence proved to be most suitable for illustrating the inner ear structures and enabled good tissue contrasts. The sequence ranked second best was also a T2-weighted DESS sequence (TR = 19 ms, TE = 6 ms), allowing the imaging of the tympanic cavity and enabling 3D reconstruction due to its isotropic voxels. Due to low contrast and strong noise, the other sequences (TSE, FISP, MP RAGE) were not suitable for anatomical illustration of the middle and inner ear.     

Virulence genotype of Pasteurella multocida strains isolated from different hosts with various disease status

To learn more about the molecular biology of Pasteurella multocida 289 strains isolated from various clinically healthy and diseased hosts were examined for capsule biosynthesis genes (capA, B, D, E, and F) and 14 virulence associated genes by PCR and DNA-DNA-hybridization. As expected, capsule type A strains were highly adapted to bovines (92.3%) and poultry (85.7%) while we mainly found capA (34.9%)- and capD (58.1%)-positive strains in swine. A noticeable amount of capD-positive strains also originated from small ruminants (34.9%) and capF was detected in wild type strains from diseased cattle (2.2%) and cats (7.4%). None of the isolates harboured capE, while capB was exclusively found in all strains from buffaloes. Nearly all isolates showed a combination of genes encoding outer membrane proteins, colonization factors, iron aquisition factors and superoxid-dismutases without any clue for host specificity. In contrast, the transferrin binding protein encoding gene tbpA (31.5%) was limited to ruminant strains and only 37.0% of all P. multocida strains harboured pfhA, coding for a filamentous hemagglutinin, supposed to be a putative adhesion- und serum resistance factor. PfhA revealed a strong positive association to the outcome of disease in bovine hosts and in combination with toxA to that in swine. The dermonecrotoxin encoding toxA, present in 12.5% of all strains, was detected in isolates from swine, small ruminants, cattle, and poultry. A significant association to the disease status, however, was only existent in swine, although with 66.7% we found a notably high prevalence of the toxin gene among strains from small ruminants. The genes toxA, tbpA and pfhA as well as capsule biosynthesis genes are supposed to be important epidemiological marker genes for characterizing P. multocida field strains.     

P-State Pairing and the Ferromagnetism of ZrZn2

It is ascertained that, within the range of stability, the transition temperature of the superconducting solutions between Ti and Zr and between Zr and Hf, and the Curie point of the corresponding ferromagnetic solutions between TiZn(2) and ZrZn(2) and between ZrZn(2) and HfZn(2), follow a parallel behavior. From this correlation it is concluded that the weak itinerant ferromagnetism of ZrZn(2) must be due to electron-phonon interaction. Theoretical arguments are advanced to show that the underlying mechanism is hindered p-state pairing, due to a strongly localized repulsive part of the pair-potential that acts as a Hubbard interaction and gives rise to a Stoner instability.     

Above- and belowground ecosystem biomass and carbon pools in an age-sequence of temperate pine plantation forests

We assessed the successional development of above- and belowground ecosystem biomass and carbon (C) pools in an age-sequence of four White pine (Pinus strobus L.) plantation stands (2-, 15-, 30-, and 65-years-old) in Southern Ontario, Canada. Biomass and C stocks of above- and belowground live and dead tree biomass, understorey and forest ground vegetation, forest floor C (LFH-layer), and woody debris were determined from plot-level inventories and destructive tree sampling. Small root biomass (<5 mm) and mineral soil C stocks were estimated from soil cores. Aboveground tree biomass became the major ecosystem C pool with increasing age, reaching 0.5, 66, 92, and 176 t ha⁻¹ in the 2-, 15-, 30-, and 65-year-old stands, respectively. Tree root biomass increased from 0.1 to 10, 18, 38 t ha⁻¹ in the 2-, 15-, 30-, and 65-year-old stands, respectively, contributing considerably to the total ecosystem C in the three older stands. Forest floor C was 0.8, 7.5, 5.4, and 12.1 t C ha⁻¹ in the 2-, 15-, 30-, and 65-year-old stands, respectively, indicating an increase during the first two decades, but no further age-effect during the later growth phase. Mineral soil C was age-independent with 37.2, 33.9, 39.1, and 36.7 t C ha⁻¹ in the 2-, 15-, 30-, and 65-year-old stands, respectively. Aboveground ecosystem C increased with age from 3 to 40, 52, and 100 t C ha⁻¹ in the 2-, 15-, 30-, and 65-year-old stands, respectively, due to an increase in aboveground tree biomass. Belowground ecosystem C remained similiar in the early decades after establishment with 37, 39, and 39 t C ha⁻¹ in the 2-, 15-, and 30-year-old stands, but increased to 56 t C ha⁻¹ in the 65-year-old stand due to an increase in root biomass. The difference in total ecosystem C between the 2- and 65-year-old stand was 116 t C ha⁻¹. Our results highlight the importance of considering the successional development of forest ecosystem C pools, when estimating C sink potentials over their complete life cycle.     

Association study in naturally infected helminth layers shows evidence for influence of interferon-gamma gene variants on Ascaridia galli worm burden

ABSTRACT: Single nucleotide polymorphisms (SNPs) in the genes for interleukin-4, -13 and interferon-gamma, and 21 additional SNPs which previously had been significantly associated with immune traits in the chicken, were genotyped in white and brown layer hens and analyzed for their association with helminth burden following natural infections. A nucleotide substitution located upstream of the promoter of the interferon-gamma gene was significantly associated with the log transformed number of Ascaridia galli in the brown layer line (genotype CC: 6.4 ± 1.0 worms; genotype CT: 11.7 ± 2.2 worms). Therefore, IFNG seems to be a promising candidate gene for further studies on helminth resistance in the chicken.