Cross-species identification of Mendel's I locus

A key gene involved in plant senescence, mutations of which partially disable chlorophyll catabolism and confer stay-green leaf and cotyledon phenotypes, has been identified in Pisum sativum, Arabidopsis thaliana, and Festuca pratensis by using classical and molecular genetics and comparative genomics. A stay-green locus in F. pratensis is syntenically equivalent to a similar stay-green locus on rice chromosome 9. Functional testing in Arabidopsis of a homolog of the rice candidate gene revealed (i) senescence-associated gene expression and (ii) a stay-green phenotype after RNA interference silencing. Genetic mapping in pea demonstrated cosegregation with the yellow/green cotyledon polymorphism (I/i) first reported by Gregor Mendel in 1866.     

Production and dissolution rates of earthworm-secreted calcium carbonate

Earthworms secrete granules of calcium carbonate. These are potentially important in soil biogeochemical cycles and are routinely recorded in archaeological studies of Quaternary soils. Production rates of calcium carbonate granules by the earthworm Lumbricus terrestris L. were determined over 27 days in a range of soils with differing chemical properties (pH, organic matter content, water holding capacity, bulk composition, cation exchange capacity and exchangeable cations). Production rate varied between soils, lay in the range $0–0.043{\text{mmol}}_{{\text{CaCO}}_3}$ (0–4.3 mg) earthworm^?1 d^?1 with an average rate of $8\times {10}^{?3}{\text{mmol}}_{{\text{CaCO}}_3}$ (0.8 mg) earthworm^?1 d^?1 and was significantly correlated (r = 0.68, P ≤ 0.01) with soil pH. In a second experiment lasting 315 days earthworms repeatedly (over periods of 39–57 days) produced comparable masses of granules. Converting individual earthworm granule production rates into fluxes expressed on a per hectare of land per year basis depends heavily on estimates of earthworm numbers. Using values of 10–20 L. terrestris m^?2 suggests a rate of $18–3139{\text{mol}}_{{\text{CaCO}}_3}{\text{ha}}^{?1}{\text{yr}}^{?1}$. Data obtained from flow-through dissolution experiments suggest that at near neutral pH, granule geometric surface area-normalised dissolution rates are similar to those for other biogenic and inorganic calcites. Fits of the data to the dissolution relationship r = k(1 ? Ω)ⁿ where r = dissolution rate, k = a rate constant, Ω = relative saturation and n = the reaction order gave values of k = 1.72 × 10^?10 mol cm^?2 s^?1 and n = 1.8 for the geometric surface area-normalised rates and k = 3.51 × 10^?13 mol cm^?2 s^?1 and n = 1.8 for the BET surface area-normalised rates. In 196 day leaching column experiments trends in granule dissolution rate referenced to soil chemistry corresponded to predictions made by the SLIM model for dissolution of limestone in soil. If soil solution approaches saturation with respect to calcium carbonate, granule dissolution will slow or even stop and granules be preserved indefinitely. Granules have the potential to be a small but significant component of the biogeochemical cycling of C and Ca in soil.     

Nano-scale secondary ion mass spectrometry — A new analytical tool in biogeochemistry and soil ecology: A review article

Soils are structurally heterogeneous across a wide range of spatio-temporal scales. Consequently, external environmental conditions do not have a uniform effect throughout the soil, resulting in a large diversity of micro-habitats. It has been suggested that soil function can be studied without explicit consideration of such fine detail, but recent research has indicated that the micro-scale distribution of organisms may be of importance for a mechanistic understanding of many soil functions. Current techniques still lack the adequate sensitivity and resolution for data collection at the micro-scale, and the question ‘How important are various soil processes acting at different scales for ecological function?’ is therefore challenging to answer. The nano-scale secondary ion mass spectrometer (NanoSIMS) represents the latest generation of ion microprobes, which link high-resolution microscopy with isotopic analysis. The main advantage of NanoSIMS over other secondary ion mass spectrometers is its ability to operate at high mass resolution, whilst maintaining both excellent signal transmission and spatial resolution (down to 50 nm). NanoSIMS has been used previously in studies focussing on presolar materials from meteorites, in material science, biology, geology and mineralogy. Recently, the potential of NanoSIMS as a new tool in the study of biophysical interfaces in soils has been demonstrated. This paper describes the principles of NanoSIMS and discusses the potential of this tool to contribute to the field of biogeochemistry and soil ecology. Practical considerations (sample size and preparation, simultaneous collection of isotopes, mass resolution, isobaric interference and quantification of the isotopes of interest) are discussed. Adequate sample preparation, avoiding bias due to artefacts, and identification of regions-of-interest will be critical concerns if NanoSIMS is used as a new tool in biogeochemistry and soil ecology. Finally, we review the areas of research most likely to benefit from the high spatial and high mass resolution attainable with this new approach.     

Infiltration of inorganic compounds from the Glatt River,Switzerland, into a groundwater aquifer

The behavior of dissolved (<0.45 μm) inorganic compounds during infiltration of river water into the adjacent aquifer (unconsolidated glacio-fluvial sediments) was investigated at the Glatt River, Switzerland, field site. The water was sampled in the river and from wells at distances of 2.5, 5, 13, and 110 m along an estimated groundwater flow line. Sodium, K, Ca, Mg, Sr, Cr, Cu, Zn, Cd, Pb, Cl^?, NO₃ ^?, SO₄ ^2?, and PO₄ ^3? were measured using AAS, NAA, and ion chromatography. Groundwater concentrations of these species are mainly determined by the concentrations in the river. However, the concentrations of NO₃ ^?, (PO₄ ^3?), Cr, Cu, Zn, Cd, and Pb are also subject to seasonal variations in the near infiltration field (≤ 5 m). These variations are probably triggered by temperature dependent biological processes which influence parameters such as pH, redox potential and complexing agents. The redox potential controls the chemical behavior of Mn, which influences the solubility of heavy metal compounds. The extent of inorganic pollution in the investigated system is still much below drinking water standards, but for Cd, reaches the toxicity limit for aquatic organisms.     

Matrix modification to improve the recovery of MMHg from clear water using distillation

The use of distillation from aqueous solution dramatically improves the recovery of methyl mercury (MMHg) from complex water samples, as compared to solvent extraction techniques. However, low and irreproducible spike recoveries are often observed when distillation is applied to very clear water samples (i.e., precipitation, double deionized water (DDW), etc.) or those containing high chloride concentrations. Based upon the observation that recoveries and reproducibility are higher for waters containing strong complexing compounds, such as humic matter, we investigated the potential of matrix modification to improve the reproducibility of MMHg by distillation from more difficult matrices. At sample acid concentrations of less than 0.1M hydrochloric acid (HCl), we found that the addition of complexers such as ammonium pyrrolidine dithiocarbamate (APDC), and aqueous humic substances improved distillation spike recoveries and reproducibility. The use of complexers was also found to suppress the co-distillation of divalent mercury (Hg(II), which, in highly contaminated samples can be an interferant with the MMHg determination. At higher HCl concentrations, irreproducibility was dominated by the interference caused by chloride co-distilled with the water. In these cases, neither the addition of complexing agents, or buffers to bind the free hydrogen ions (H⁺) in solution were effective in improving results.     

Quantitative Mineralbestimmung in der Schlufffraktion von Böden auf der Grundlage der chemischen Analyse und unter Anwendung der Karl-Fischer-Titration. I. Verfahren

Quantitative estimation of the mineralogical composition of silt fractions of soils based on both, chemical analysis and application of Karl-Fischer-titration. I. Method This paper describes a method for calculating the mineralogical composition of the silt fractions of soils. The chemical analysis and the temperature dependence of water release are used for determining micas and feldspars, each in three components in a relatively short procedure. The release of water was measured by Karl-Fischer-titration at controlled temperatures. At temperatures above 550°C the water release of the particle size fractions correlates with their content of micas. The quantity of micas can be obtained from the amount of released water and the results of the chemical analysis. The influence of kaolinite, amphibole and the fluoride content on the calculation is described. By considering the potassium content of the mica fraction results of the chemical analysis are used to quantify feldspars.     

Wasserhaushalt und Dickenwachstum von Kiefern in Abhängigkeit des Grundwasserflurabstandes

Water budget and annual ring growth of pines for different groundwater depth conditions Relation between annual ring width and water supply was examined for different groundwater depth in an old pine stand on a sandy soil. The quotient Ereal/Epot is a suitable parameter to quantify water stress. Multiple regression analyses were used to describe the dependence between annual ring width and water stress. Mean growth of basal area can be expressed by Ereal/Epot of the actual and previous year. This site specific function was used to quantify growth reduction affected by ground-water lowering for various soil conditions.