Allelic composition and associated quality traits of the <Emphasis Type="Italic">Glu-1</Emphasis> and <Emphasis Type="Italic">Glu-3</Emphasis> loci in selected modern Ethiopian durum wheat varieties

Gluten protein determines the processing quality of both durum wheat and bread wheat. The glutenin subunits compositions and associated quality traits of 20 Ethiopian durum wheat varieties were systematically analyzed using SDS-PAGE and Payne numbers. A total of 16 glutenin patterns were identified. At the Glu-A1 locus, all varieties scored the null allele. The predominant glutenin alleles at the Glu-B1 locus were Glu-B1b (7+8) and Glu-B1e (20). In Glu-3, the most abundant glutenin subunits were Glu-A3a and Glu-B3c. Based on the Payne scores, the varieties Yerer, Ginchi, Candate, and Foka were identified to have allelic composition suitable for pasta making. The cluster analysis using agglomerative hierarchical clustering (AHC) method classified the varieties into four similarity classes. Based on the findings of this experiment, suggestions were made for allelic composition improvement through introgression of superior alleles from known Glu-1 and Glu-3 sources.     

Identification and validation of cold responsive microRNAs of <Emphasis Type="Italic">Hevea brasiliensis</Emphasis> using high throughput sequencing

Cold stress is one of the major abiotic factors that influence the productivity and geographical distribution of many agriculturally important crops like Hevea brasiliensis. Cultivation of H. brasiliensis in India is being extended to northeastern regions, where low temperature during winter adversely affects its survival, growth, and productivity. Developing cold-tolerant genotypes is a primary requisite to maximize the productivity under such challenging environmental conditions. However, lack of methods for early evaluation of cold tolerance in the newly developed clones and the extensive time required for assessing their tolerance in the field are major constraints for clonal selection. The present study was initiated with an objective to identify and characterize cold stress responsive miRNAs from H. brasiliensis that show stronger association with cold tolerance. Next generation sequencing using Illumina HiSeq method revealed the expression of 21 and 29 conserved miRNA (from clone RRIM 600) families in cold-stressed and control samples, respectively. Forty-two novel miRNAs were identified from this study. Upon differential expression analysis, eight conserved miRNAs were found commonly expressed in both the samples. When expression analyses were performed subsequently with six selected miRNAs in two Hevea clones (viz. RRII 105 and RRIM 600), miR169 showed a strong association with cold tolerance. miRNAs such as miR482 and miR159 also exhibited association with cold tolerance. This study suggests the possibility of employing these miRNAs as markers for cold tolerance after validation in more number of genotypes with varying levels of cold tolerance.     

Efficiency of SNP and SSR-based analysis of genetic diversity,population structure,and relationships among cowpea (<Emphasis Type="Italic">Vigna unguiculata</Emphasis> (L.) Walp.) germplasm from East Africa and IITA inbred lines

The extent of genetic diversity and relatedness of cowpea germplasm from East Africa are poorly understood. A set of 13 microsatellites (SSR) and 151 single nucleotide polymorphisms (SNPs) markers were applied to assess the levels of genetic diversity in a sample of 95 accessions of local cowpea germplasm and inbred lines of Vigna unguiculata. The average genetic diversity (D), as quantified by the expected heterozygosity, was higher for SSR loci (0.52) than for SNPs (0.34). The polymorphic information content was 0.48 for SSR and 0.28 for SNP while the fixation index was 0.095 for SSR and 0.15 for SNPs showing moderate differentiation and high gene flow among cowpea accessions from East African countries. The results of data analysis of both SSR and SNP markers showed similar clustering patterns suggesting a substantial degree of association between origin and genotype. Principal coordinate analysis (PCoA) with SSR and SNP markers showed that accessions were grouped into two and three broad groups across the first two axes, respectively. Our study found that SNP markers were more effective than SSR in determining the genetic relationship among East African local cowpea accessions and IITA inbred lines. Based on this analysis, five local cowpea accessions Tvu-13490, Tvu-6378, Tvu-13448, Tvu-16073, and 2305675 were identified to be tightly clustered sharing several common alleles with the drought tolerant variety Danila when analyzed with SSR and SNP markers. The findings will assist and contribute to future genetic diversity studies aimed at the genetic improvement of local Eastern Africa cowpea accessions for improved overall agronomic performance in general and breeding for drought tolerant in particular.     

Effects of carbohydrate source and polyethylene glycol on maturation and germination of somatic embryos in walnut (<Emphasis Type="Italic">Juglans regia</Emphasis> L.)

Low efficiency of somatic embryo maturation, germination, and conversion to plantlets is a major problem in many species including J. regia L. Germination efficiency of somatic embryos is very low in walnut. In this study, effects of two carbohydrate sources, sucrose and maltose (each at 3% and 6%), and two kinds of PEG (4000 and 6000) (each at four levels of 1.5%, 3%, 5% and 7.5%) on maturation and germination of walnut embryos were tested. The number of somatic embryos increased conspicuously on medium containing PEG. Furthermore, higher levels of PEG-4000 (7.5%) could remarkably enhance the morphogenesis of somatic embryos and the number of embryos produced. PEG-4000 stimulated somatic embryo maturation of walnut. This stimulatory effect was dependent on the carbohydrate source used. Sucrose in combination with PEG-4000 produced 50% of cotyledonary and normal somatic embryos. Different concentrations of PEG were effective on the number of embryos with a shoot meristem. PEG-4000 7.5% and sucrose 3.0% produced the highest rate (50.0%) of normal shooting embryos. However, PEG (4000, 6000) and maltose caused an unfavorable effect and increased the frequency of abnormal shaped somatic embryos.     

Artificial polyploidy in medicinal plants: Advancement in the last two decades and impending prospects

Medicinal plants are in huge demand since the consumption is widespread and ever-increasing globally. The conventional breeding programs are generally environmental dependent; prone to different biotic and abiotic stresses as well as the secondary metabolite content is too low to harvest. In this context, developing polyploid individuals artificially would be a remarkable approach to increase vigor and attain this objective. Polyploids often exhibit some morphological features that are different or greater in forms than their diploid progenies. Polyploidization can be induced by quite a few antimitotic agents. The most frequently used antimitotic chemicals are colchicine, trifluralin, and oryzalin. The whole method of induced chromosome doubling consists of a series of steps, including an induction phase, regrowth phase, and a confirmation technique to evaluate the rate of achievement. The induction phase depends on different factors, such as explant types, antimitotic agents, its different concentrations, and exposure durations. To evaluate the accomplishment of polyploidization, morphological or anatomical observations are recorded as a rapid method. However, chromosome count and flow cytometry are the most eminent method for absolute confirmation. Despite significant prospects of polyploidization, there has been very little research on medicinal plants. The current review gives an overview of the different parameters of in vitro chromosome doubling, the history of the technique, and progress made over the last two decades.     

基于Fuzzy-Smith控制器的营养液pH值调控系统研究

pH值的控制是水肥一体化营养液循环控制系统的重要环节,水肥控制过程中pH值在最优控制范围内有利于根系的发育以及多数矿物质的吸收。营养液调控过程中,由于循环管路以及酸液的缓慢扩散,使得pH值调节过程存在很大的时滞,传统PID难以取得良好效果。本研究根据被控对象特点,建立了描述该过程的数学模型,设计开发了一套具有二次混肥特性的以MSP430单片机为主控的营养液pH值控制系统。由于参数自整定模糊PID不需要精确数学模型以及Smith预估可对纯滞后进行补偿的特点,开发的系统将参数自整定模糊PID控制引入Smith预估当中,既缓解了滞后时间对控制系统的影响,又对模型的不精确性进行了补偿。为了验证该算法以及系统的有效性和优越性,分别对PID、Fuzzy-Smith控制算法进行仿真测试,同时在不同灌溉量下进行性能试验。试验结果表明,在不同灌溉量下Fuzzy-Smith控制算法pH值的平均最大超调量为0.83%,营养液pH值从8.0调节为6.0的平均时间为157s,优于常规PID控制的2.55%和189s。     

Determination of Energy Use Efficiency of some Apple (<Emphasis Type="Italic">Malus x domestica</Emphasis>) Production in Turkey: a Case Study of Eğirdir Region

This research aims to make an analysis of energy use efficiency of apple (‘Starkrimson Delicious’ and ‘Golden Delicious’) production in E?irdir region of Turkey, during the production season of 2012. Production data this research was collected in 2013. In order to determine the energy use efficiency of apple, various surveys have been conducted in 71 apple farms, selected through Simple Random Sampling method, located in E?irdir region of Turkey. The data have been collected through face to face questionnaires and first hand observations. The energy input and output values in apple production have been calculated as 34,703.63 MJ ha^?1 and 95,034 MJ ha^?1, respectively. Energy inputs consist of diesel fuel energy by 29.04?%, chemical fertilizers energy by 24.28?%, machinery energy by 15.70?%, chemical energy by 9.84?%, human labor energy by 8.54?%, electricity energy by 5.63?%, irrigation energy by 3.97?%, farmyard manure energy by 2.88?% and lime energy by 0.12?%. Energy use efficiency, energy productivity, specific energy and net energy in apple production have been calculated as 2.74, 1.16 kg MJ^?1, 0.86 MJ kg^?1 and 60,330.36 MJ ha^?1, respectively. The total energy input consumed has been classified as direct, by 47.17?%, indirect, by 52.83?%, renewable, by 15.38?% and non-renewable, by 74.62?%.     

Chemical and Non-Chemical Thinning Treatments Influence Berry Growth and Composition of <Emphasis Type="Italic">Cv.</Emphasis> Shiraz Wine Grape (<Emphasis Type="Italic">V. vinifera</Emphasis> L.)

Yield management is important subject in modern grape growing and winter pruning and cluster thinning treatments were used for yield control. Standard cluster thinning is generally labor intensive and expensive method and grape growers try to new methods, which are alternative to cluster thinning for reducing berry set. The goal of the present research was to investigate the effects of chemical thinning treatments such as ethephon (ETH), gibberellic acid (GA₃), naphthalene acetic acid (NAA) and non-chemical thinning treatments such as early leaf removal (ELR) and standard cluster thinning (SCT) on decreasing grape yield and enhancing berry composition of cv. Shiraz. In this study, percentages of berry set of cv. Shiraz were decreased by both chemical and non-chemical thinning treatments compared to Control. The results from these two different thinning methods shown certainly significant differences in berry composition of cv. Shiraz. Eventually, the best results in improved quality characteristics of cv. Shiraz were obtained from ELR treatment and treatments of ELR, ETH, GA_3, NAA and SCT successively resulted in considerable enhancements in quality attributes of cv. Shiraz.     

Determination of Energy Input-Output Analysis in Plum (<Emphasis Type="Italic">Prunus domestica</Emphasis> L.) Production

The aim of this research is to compose the energy input-output analysis of plum in Nevsehir province in Turkey. This research was conducted at the plum cultivating facilities during the 2015–2016 production seasons in Nevsehir province of Central Anatolian Region in Turkey. The agricultural input energies and output energies used in plum cultivation were calculated to determine the energy input-output analysis. According to the research findings, the energy inputs in plum cultivation were calculated respectively 3920?MJ ha^?1 (44.99%) chemical fertilizers energy, 1618.91?MJ ha^?1 (18.58%) diesel fuel energy, 1125.85?MJ ha^?1 (12.92%) chemicals energy, 1069.20?MJ ha^?1 (12.27%) machinery energy, 723.24?MJ ha^?1 (8.30%) human labour energy and 255?MJ ha^?1 (2.93%) irrigation water energy. Production output plum yield were calculated as 12,112.50?MJ ha^?1. The energy output/input ratio, specific energy, energy usage efficiency and net energy calculations were calculated respectively as 1.39, 1.37?MJ kg^?1, 0.73?kg MJ^?1 and 3400.30?MJ ha^?1.     

Seasonal Changes of Shoot Carbohydrates and Growth Characteristics of ‘Trakya İlkeren’ Grape Variety (<Emphasis Type="Italic">Vitis vinifera</Emphasis> L.)

This research was conducted to determine the changes in the seasonal carbohydrates of annual shoots and growth characteristics of 10 years old ‘Trakya ?lkeren’ grape variety. Grapevines are grafted on 5BB and 5C rootstocks and they were grown in heavy clay soil conditions. In the study, changes of sugar, starch and total carbohydrates were determined from bud burst to dormancy. While sugar, starch and total carbohydrates showed significant differences (P < 0.01) there were no differences between rootstocks. Although sugar, starch and total carbohydrates of shoots decreased from bud burst to blooming, they increased thereafter until vegetative growth stopped. Total carbohydrates of annual shoots have been found to accumulate in period from blooming to harvest. Total and mean leaf area, shoot length and diameter, total chlorophyll and chlorophyll a/b ratio showed significantly variation among rootstocks and phenological stages (P < 0.01). Whereas the highest chlorophyll contents were found in the blooming, it was found at the lowest through to harvest. Overall mean and total leaf area, shoot length and shoot diameter, total chlorophyll content and chlorophyll a/b ratio were significantly higher on 5BB grafted vines. In the study, 5BB rootstocks are found suitable in terms of shoot carbohydrate accumulation and growth characteristics for ‘Trakya ?lkeren’ grape variety.