Three distinct groups of isolates of <Emphasis Type="Italic">Tomato yellow leaf curl virus</Emphasis> in Japan and construction of an infectious clone

Complete nucleotide sequences of eight Japanese isolates of Tomato yellow leaf curl virus (TYLCV) were determined and compared with four TYLCV isolates already reported. These isolates separated into three groups – Shizuoka (Sz), Aichi (Ai), Nagasaki (Ng) – and had 99% identities within the groups. Full-length molecules of DNA-A of group Sz consist of 2791nt and those of group Ai contain 2787nt. Both were closely related to TYLCV-Is.M, although those of group Ng had 2793nt and were more closely related to TYLCV-Is. Comparison of common sequences of isolates belonging to groups Sz and Ai had substitutions of 4nt in the intergenic region and nonsynonymous substitutions at open reading frames between the groups. None of the isolates tested had DNA molecules. Agroinfection of four plant species with a DNA-A dimeric infectious clone of TYLCV-SzY, a member of group Sz, resulted in systemic infection. Tomato plants then developed typical yellow leaf curl symptoms.The nucleotide sequence data reported are available in the DDBJ/EMBL/GenBank databases under accession numbers AB116629, AB116630, AB116631, AB116632, AB116633, AB116634, AB116635, and AB116636     

Consecutive changes in serum alkaline phosphatase isoenzyme 3 activities in Holstein heifers during the first 18 months of life

This study investigated consecutive fluctuations in serum activities of bone-specific alkaline phosphatase (ALP) isoenzyme 3 (ALP3) in 11 clinically healthy Holstein heifers during the first 18 months of life. ALP3 activities at the first sampling time point after weaning (3 months) were significantly lower than those at multiple time points during the pre-weaning period. Those activities increased from a minimum at 3 months to a peak at 6 months during the post-weaning period. In the anthropometric data, daily body weight and wither height gains appeared to be below the public data at 4 months and 4–5 months, respectively. The data suggested that serum ALP3 activity can be used to monitor skeletal growth of heifers at weaning.     

Regulatory blueprint for a chordate embryo

Ciona is an emerging model system for elucidating gene networks in development. Comprehensive in situ hybridization assays have identified 76 regulatory genes with localized expression patterns in the early embryo, at the time when na?ve blastomeres are determined to follow specific cell fates. Systematic gene disruption assays provided more than 3000 combinations of gene expression profiles in mutant backgrounds. Deduced gene circuit diagrams describing the formation of larval tissues were computationally visualized. These diagrams constitute a blueprint for the Ciona embryo and provide a foundation for understanding the evolutionary origins of the chordate body plan.     

Determination of the geographic origin of onions between three main production areas in Japan and other countries by mineral composition

Onions (Allium cepa L.) are produced in many countries and are one of the most popular vegetables in the world, thus leading to an enormous amount of international trade. It is currently important that a scientific technique be developed for determining geographic origin as a means to detect fraudulent labeling. We have therefore developed a technique based on mineral analysis and linear discriminant analysis (LDA). The onion samples used in this study were from Hokkaido, Hyogo, and Saga, which are the primary onion-growing areas in Japan, and those from countries that export onions to Japan (China, the United States, New Zealand, Thailand, Australia, and Chile). Of 309 samples, 108 were from Hokkaido, 52 were from Saga, 77 were from Hyogo, and 72 were from abroad. Fourteen elements (Na, Mg, P, Mn, Co, Ni, Cu, Zn, Rb, Sr, Mo, Cd, Cs, and Ba) in the samples were determined by frame atomic adsorption spectrometry, inductively coupled plasma optical emission spectrometry, and inductively coupled plasma mass spectrometry. The models established by LDA were used to discriminate the geographic origin between Hokkaido and abroad, Hyogo and abroad, and Saga and abroad. Ten-fold cross-validations were conducted using these models. The discrimination accuracies obtained by cross-validation between Hokkaido and abroad were 100 and 86%, respectively. Those between Hyogo and abroad were 100 and 90%, respectively. Those between Saga and abroad were 98 and 90%, respectively. In addition, it was demonstrated that the fingerprint of an element pattern from a specific production area, which a crop receives, did not easily change by the variations of fertilization, crop year, variety, soil type, and production year if appropriate elements were chosen.     

Effects of temporary cessation of milking following intramammary cefazolin sodium infusion on residual antibiotic in lactating dairy cows

The aims of studies were to estimate the withdrawal period of antibiotic from milk after the intramammary infusion of cefazolin sodium (CEZ) in cows with difficulties in frequent milk discharge due to disease such as teat injury. The period was compared among cows milked twice a day after 150 or 450 mg of CEZ were administered to all quarters (Study 1, 2) and the cows in which milking of front-right quarter was ceased for five days after administration of these infusions to only that quarter (Study 3). In Studies 1 and 2, the median of 17.66 µg/ml and 83.18 µg/ml of CEZ were detected in the samples of first milking after intramammary administration, respectively; however, there was no residual antibiotic by 72 hr in all cows. In Study 3, the median of 1.96 µg/ml of CEZ was detected in the sample after the resumption of milking at 120 hr, and the residual was eliminated by 174 hr. The withdrawal period may be prolonged by the cessation of milking after administration, and the period is the total time from cessation to 72 hr after the resumption of milking.     

Serum iron concentration is candidate inflammatory marker for respiratory diseases in beef cows

We hypothesized that the serum iron (Fe) concentration in cows with respiratory diseases is a satisfactory substitute for major inflammatory markers such as haptoglobin (HPT) and serum amyloid A (SAA). Twenty Japanese Black cows aged 279.6 ± 120.0 days were enrolled, and divided into respiratory diseases and control groups based on the presence of clinical findings of respiratory diseases. As a result, area under the receiver operating characteristic curves for plasma HPT, SAA and serum Fe concentrations for respiratory disease-associated systemic inflammation were excellent, at 1.00, 0.96 and 0.97, respectively. Therefore we confirmed that the serum Fe concentration is a satisfactory substitute for HPT and SAA in beef cows with respiratory diseases.     

The next frontier

High-intensity lasers are opening up a new realm of light-matter interactions. In his Perspective, Yamanouchi reviews recent progress in this field, focusing on two intensity regimes: the Coulombic regime, which mostly deforms molecular structures and causes tunneling ionization, and the relativistic regime, where high-intensity lasers produce x-rays and high-energy particles and may cause nuclear fusion reactions. Efforts are under way to increase laser intensity further for accessing the next frontier.     

Variation in Firmness of Whole Beans,Embryos, and Testas of Cooked Soybean (Glycine max) Cultivars

The firmness of whole beans and of separated embryos and testas from 20 soybean cultivars grown in the same field conditions was estimated after 40 min cooking with AACC International Approved Method 56‐36.01. There were considerable variations in the firmness of whole beans, embryos, and testas among cultivars. Testas were much firmer than embryos because of their leathery texture and resistance at slots in the shear cell during compression. For soft cultivars, the firmness after 10 min cooking was also measured, and an apparent first‐order reaction kinetics model was applied to estimate the initial firmness at 0 min cooking and the softening rate constant from firmness data after 10 and 40 min cooking. The estimated initial firmness at 0 min cooking and softening rate constant of embryos and testas varied widely among seven cultivars, and these two parameters were considered to be controlled by different genetic mechanisms, because no correlation was found between the parameters. The softening rate constants of testas were much smaller than those of embryos, and the relative firmness of testas to embryos increased during cooking. The firmness of whole beans and embryos after 10 min cooking would be a useful characteristic for approximating their firmness after 40 min cooking.