Distribution of Microorganisms,Biomass ATP,and Enzyme Activities in Organic and Mineral Particles of a Long‐Term Wastewater Irrigated Soil

The aim of the study was to elucidate the spatial distribution of soil microorganisms and enyzme activities in a long‐term wastewater treated soil. Soil was sampled from a plough layer of the Ah horizon of a sandy Haplic Luvisol which was either (1) irrigated with municipal wastewater for almost 100 years, or (2) no more irrigated since 20 years, or (3) never received wastewater. The samples were fractionated by wet sieving to obtain seven size fractions of organic and mineral soil particles, and a separate silt+clay fraction. The individual soil samples contained between 1.2% (never irrigated) and 4.1% (long‐term irrigated) organic particles by weight, but these particles harboured up to 47.8% of the total soil carbon and 41.7% of nitrogen, and thus represented an important storage of energy and nutrient for microorganisms. In total, however, the highest C and N amounts were accumulated in the silt+clay fraction, whereas coarser mineral particles which dominanted by weight in the Haplic Luvisol were low in C and N. The highest numbers of bacteria, actinomycetes and fungi per gram of the individual soil fractions were found in organic particles of the long‐term irrigated soil. Less nutrient‐dependent oligotrophic bacteria were for the most part associated with the silt+clay fraction, irrespective of the soil treatment with wastewater. Similar to microbial counts, also the ATP content, as a measure of active microbial biomass, and the activities of β‐glucosidase, β‐acetylglucosaminidase, and proteinase were higher in the long‐term irrigated soil than in that which was never irrigated. In most cases slightly enhanced values of microbiological and biochemical parameters were still detectable 20 years after the wastewater irrigation was terminated. The values of the individual parameters decreased in all soil samples under testing in general gradually with decrease in size of the organic soil particles. In conclusion, the coarse soil organic particles > 5 mm and the silt+clay fraction < 0.05 mm represent the sites with the highest microbial inhabitance, ATP contents and enzyme activities in the Ah horizon of an Haplic Luvisol. Long‐term wastewater irrigation resulted in an increase of microbial counts, total biomass and soil enzyme activities.     

Fungal biodegradation of a phenylurea herbicide,diuron : structure and toxicity of metabolites

Microbial degradation, organic synthesis and ecotoxicology were used to investigate the fate of diuron after spreading on soils. Quantitative biodegradation assays were performed with fungal strains, showing that diuron was degraded but not entirely mineralized. The modifications observed consisted in demethylation of the terminal nitrogen atom. The identified metabolites were synthesized in sufficient amounts to confirm their structures and determine their non‐target toxicity using four biotests. The two metabolites exhibited higher effects than parent diuron. This limited biodegradability and potential aquatic toxicity suggest that diuron is of higher environmental concern than previously recognized. © 2000 Society of Chemical Industry     

Shedding light on the migratory patterns of the Amazonian goliath catfish,Brachyplatystoma platynemum,using otolith 87Sr/86Sr analyses

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Antifungal activity of resveratrol oligomers from Cyphostemma crotalarioides

Resveratrol and its oligomers: ε-viniferine, gnetin C, Pallidol and gnetin E, as well as three new dehydrodimers, cyphostemmines A–C, have been isolated from the roots of Cyphostemma crotalarioides (Ampelidaceae). Such compounds have not been reported previously in the family Ampelidaceae. Cis ε-viniferin has also been characterized as a minor component of the extract; it may have undergone partial transformation in solution into trans ε-viniferin. ©1999 Society of Chemical Industry     

Insecticidal activity of daphnane diterpenes from Lasiosiphon kraussianus (Meisn) (Thymelaeaceae) roots

A methanol extract of roots of Lasiosiphon kraussianus (Meisn) (Thymelaeaceae) showed potent insecticidal activity against Aphis gossypii (Glov) and Drosophila melanogaster (Meig). Bioassay-driven fractionation of this extract led to the isolation and characterisation of two known daphnane diterpenoids: Excoecaria toxin (1) and wikstrotoxin D (2) . The two natural products were inferior to methomyl in activity against A gossypii and Myzus persicae (Sulz) in contact assays but were superior in ingestion assays against D melanogaster. This is the first report on insecticidal activities of compounds 1 and 2 . AChE was insensitive to the two natural products. © 1999 Society of Chemical Industry     

Bioinformatics tools for the discovery of new lipopeptides with biocontrol applications

As conventional or chemical pesticides have negative impact on environment and health of both farmer and consumers, it becomes relevant to develop alternative solutions to limit their use. In this context, innovative strategies to accelerate the development of biocontrol agents are welcome. For a decade of years, it has been demonstrated that lipopeptides are very efficient weapons against fungi responsible for crop diseases. Lipopeptides are secondary metabolites, produced by many microorganisms including beneficial rhizobacteria. The lipopeptide biosynthetic pathways include nonribosomal peptide synthetases. These modular enzymatic complexes work as assembly lines to build the peptides step by step, leading to the production of original peptide compounds with specific features as the presence of non proteinogenic monomers and cyclic and branched structures. In this paper, Florine and Norine bioinformatics tools, especially dedicated to non-ribosomal synthetases and their products are presented. Their use is mainly focused on the discovery of lipopeptides produced by Bacillus or Pseudomonas because they seem to represent a versatile reservoir of active secondary metabolites with promising activities for applications in phytosanitary area.     

Understanding physical clogging in drip irrigation: in situ,in-lab and numerical approaches

Dripper clogging is a major drawback of microirrigation systems that must be addressed to improve their efficiency and durability. Particle-induced clogging is first studied in situ. The experiments consist in observing in real conditions the behavior of a series of drippers fitted on an agricultural plot in the south of France. The plot is supplied from a canal with Durance River water. The latter is loaded with sediments that gradually clog drippers and filters. Water analysis reveal that physicochemical clogging prevails over biological clogging. This characterization helps in setting in-lab experiment protocol. Indeed, besides field observation of clogging, laboratory analyses of both the irrigation water and the clogging material are performed with reactive and inert clay: smectite and an illite–calcite mix. A surprising tendency is observed: Salt concentration in smectite seeded water decreases the clogging, whereas it increases agglomerate size. Computational fluid dynamic simulations are carried out to investigate the impact of particles on flow behavior. Results demonstrate that clay particles interacting with the flow govern the complex structure of the fluid velocity fields inside the dripper labyrinth channel.     

QTL mapping of a partial resistance to the corn delphacid‐transmitted viruses in Lepidopteran‐resistant maize line Mp705

A partial resistance to maize mosaic virus (MMV) and maize stripe virus (MStV) was mapped in a RILs population derived from a cross between lines MP705 (resistant) and B73 (susceptible). A genetic map constructed from 131 SSR markers spanned 1399 cM with an average distance of 9.6 cM. A total of 10 QTL were detected for resistance to MMV and MStV, using composite interval mapping. A major QTL explaining 34–41% of the phenotypic variance for early resistance to MMV was detected on chromosome 1. Another major QTL explaining up to 30% of the phenotypic variation for all traits of resistance to MStV was detected in the centromeric region of chromosome 3 (3.05 bin). After adding supplementary SSR markers, this region was found to correspond well to the one where a QTL of resistance to MStV already was located in a previous mapping study using an F₂ population derived from a cross between Rev81 and B73. These results suggested that these QTL of resistance to MStV detected on chromosome 3 could be allelic in maize genome.     

Expression of conserved mucin domains by epithelial tissues in various mammalian species

Mucins are related to infectious and non-infectious diseases in Veterinary and Human Medicine. MUC1 mucin is a transmembrane glycoprotein expressed on the apical surface of human epithelia while MUC5AC is the predominant secreted mucin expressed in human gastric epithelium and goblet cells of lung and eyes. MUC5AC C-terminus cysteine rich regions and the cytoplasmic tail of MUC1 domains are conserved among several mammalian species. Objective: to compare the expression of MUC1 and MUC5AC mucins in mammalian epithelia. CT33 anti-MUC1 cytoplasmic tail (MUC1CT) polyclonal antibody and 45M1 anti-MUC5AC monoclonal antibody were employed. By immunohistochemistry, MUC1CT was expressed in most tissues while MUC5AC was restricted to gastric surface epithelium and goblet cells from trachea and lung. By western blot, MUC1CT showed a band at approximately 35 kDa in most tissues; MUC5AC revealed bands at >180 kDa in stomach and lung secretions from rat, cat, pig and cow. When rat MUC5AC was immunoprecipitated, a band at about 180 kDa was obtained.     

Laminin receptor 1 is differentially expressed in thoracic and limb wounds in the horse

Healing of wounds located on the distal limbs of horses is often complicated by retarded epithelialization and the development of exuberant granulation tissue (proud flesh). Treatments that definitively resolve this pathological process are still unavailable. Molecular studies of the repair mechanism might contribute to the development of new therapeutic strategies. The study presented herein aimed to clone the full length cDNA and to study the spatio-temporal expression profile of mRNA and protein for LAMR1, previously attributed a role in wound epithelialization, during the repair of body and limb wounds in the horse. Cloning was achieved by screening a cDNA library previously derived from 7-day wound biopsies. Expression was studied in unwounded skin and in samples from 1-, 2-, 3-, 4- and 6-week-old wounds of the body and limb. Temporal gene expression was determined by real time polymerase chain reaction (RT-PCR) while protein expression was mapped immunohistochemically. Full-length cDNA for equine LAMR1 was shown to be highly similar to that of other species. The mRNA expression of LAMR1 was significantly up-regulated only in thoracic wounds, 4 and 6 weeks following wounding (upon epithelialization). Cutaneous wounding induced protein expression at both locations. Our data suggest that up-regulation of LAMR1 protein might favour epithelialization during wound healing. However, its interaction with ligands other than laminin complicates data interpretation. Future studies should quantitatively verify the temporal expression of this protein in order to provide the basis for targeted therapies that might enhance epithelialization.