Micro-scaled high-throughput digestion of plant tissue samples for multi-elemental analysis

Background  

Quantitative multi-elemental analysis by inductively coupled plasma (ICP) spectrometry depends on a complete digestion of solid samples. However, fast and thorough sample digestion is a challenging analytical task which constitutes a bottleneck in modern multi-elemental analysis. Additional obstacles may be that sample quantities are limited and elemental concentrations low. In such cases, digestion in small volumes with minimum dilution and contamination is required in order to obtain high accuracy data.     

Non-abscised aborted sweet cherry fruits are vulnerable to fruit decaying fungi and may be sources of infection for healthy fruits

During three growing seasons (1999–2001), disease incidence of non-abscised aborted and normally developing (sound) sweet cherry fruits were investigated in a research orchard at Ullensvang, western Norway. To reveal possible fungal infections, aborted and sound fruits of two cultivars (cv. Van for three years and cv. Lapins for two years) were harvested over four to seven weeks in an experimental orchard during the green fruit phase and incubated at 20°C in moisture saturated air for 7 days. The most frequently observed fungal pathogens were Monilinia laxa, Colletotrichum gloeosporioides, and Botrytis cinerea. The mean of all observations (±standard deviation) over three years, showed that aborted and sound fruits had a disease incidence of 51.9% (±31.8) and 5.2% (±9.7), respectively, after seven days incubation. In 24 of 25 trials aborted fruits had significantly higher disease incidence than sound fruits after incubation. In one season, when fruits were collected from two commercial orchards, aborted fruits had much higher disease incidence than sound fruits (a mean of 6.5 and 4.5 times higher incidence for the two orchards, respectively). Time of fruit abortion varied with the years (two years observation) and the two cultivars, but the major abortion took place between the fourth and eighth week after anthesis. A higher disease incidence and more rapid disease development in non-abscised aborted fruits indicate that they are more vulnerable to fungal colonisation than sound fruits and may thus be potential incoulum sources for neighbouring, healthy fruits.     

Chemical and sensory quantification of geosmin and 2-methylisoborneol in rainbow trout (Oncorhynchus mykiss) from recirculated aquacultures in relation to concentrations in basin water

Globally, aquaculture systems with water recirculation experience increasing problems with microbial taste and odor compounds (TOCs) such as geosmin and 2-methylisoborneol (MIB). This study investigated the content of geosmin and MIB in water and the flesh of 200 rainbow trouts from eight recirculated aquaculture systems in Denmark. TOC content in the fish flesh was measured by a dynamic headspace extraction method and was evaluated by a sensory panel. The results showed significant correlations between TOC content in water and fish and between chemical analysis and sensory perception. When geosmin exceeded 20 ng/L in the water, 96% of the fish had an intense muddy flavor, but below 10 ng geosmin/L, 18% of the fish (only 3% in special depuration ponds) had an intense muddy flavor. The results indicate that TOC levels <10 ng/L will ensure that a negligible portion of the fish obtains an unpalatable taste and flavor due to TOCs.     

Energy and Resources: A plan is outlined according to which solar and wind energy would supply Denmark's needs by the year 2050

Two possible futures for the industrial world may be distinguished: (i) Large amounts of low-cost energy become available and the more energy-intensive methods for extracting resources from lowergrade deposits continue to sustain industrial expansion until either the environmental impact becomes unacceptable or ultimate limits, such as climate disruptions, put an end to such growth. (ii) The cost of nonrenewable energy resources continue to rise, but a fixed amount of energy from continuous sources may be utilized at constant cost. In this case a lower production level may be set by the amount of energy that is available from renewable sources, and society may thus have to be reshaped with energy economization in focus. If it is possible to choose between these two alternatives, the choice should be based on a discussion of the pros and cons of each one, and in particular on the desirability of having to process an increasing fraction of the earth's crust in search of raw materials in order to maintain growth as long as possible. However, the availability, of the first option is far from certain and it thus seems reasonable to plan for the second alternative. I have tried to propose such a plan for a small, homogeneous geographical region, namely Denmark. The ceiling on the consumption of energy from continuous sources is chosen in accordance with the criterion of not having to convert a major part of the land area to energy-collecting systems. The proposed annual average energy consumption of 19 gigawatts by the year 2050 corresponds to solar energy collecting panels (in use only 50 percent of the time) with an area of roughly 180 square kilometers and a windmill swept area of about 150 square kilometers. These (vertical) areas constitute less than 1 percent of the total land area. The selection of solar or wind energy for different applications has been based on known technology and may be subject to adjustments. The project has been shown to be economically feasible according to estimates of the cost of various alternatives during the 25-year depreciation period adopted. However, the initial cost per energy unit produced is higher than that for most of the alternatives, so that action is not expected to be taken immediately as a result of purely private initiative. In a public economic evaluation, other factors must be considered in addition to the cost of energy per kilowatt-hour. At present, Denmark has over 10 percent of its labor force out of employment and a substantial deficit on its balance of payments, so that an early start on the solar and wind energy project, based on national industry, would have additional payoffs compared with energy systems based on imported technology or imported fuels. Several factories that are now being closed down as a result of the economic crisis could be adapted to the production of parts for solar or wind power systems, and the building industry, badly hit by unemployment, would receive legitimate work.     

Genomewide association study reveals novel quantitative trait loci associated with resistance towards Septoria tritici blotch in North European winter wheat

Fungal diseases are a major constraint for wheat production. Effective disease resistance is essential for ensuring a high production quality and yield. One of the most severe fungal diseases of wheat is Septoria tritici blotch (STB), which influences wheat production across the world. In this study, genomewide association mapping was used to identify new chromosomal regions on the wheat genome conferring effective resistance towards STB. A winter wheat population of 164 North European varieties and breeding lines was genotyped with 15K single nucleotide polymorphism (SNP) wheat array. The varieties were evaluated for STB in field trials at three locations in Denmark and across 3 years. The association analysis revealed four quantitative trait loci, on chromosomes 1B, 2A, 5D and 7A, highly associated with STB resistance. By comparing varieties containing several quantitative trait loci (QTL) with varieties containing none of the found QTL, a significant difference was found in the mean disease score. This indicates that an effective resistance can be obtained by pyramiding several QTL.     

Aerobic microbial respiration in 86-million-year-old deep-sea red clay

Microbial communities can subsist at depth in marine sediments without fresh supply of organic matter for millions of years. At threshold sedimentation rates of 1 millimeter per 1000 years, the low rates of microbial community metabolism in the North Pacific Gyre allow sediments to remain oxygenated tens of meters below the sea floor. We found that the oxygen respiration rates dropped from 10 micromoles of O(2) liter(-1) year(-1) near the sediment-water interface to 0.001 micromoles of O(2) liter(-1) year(-1) at 30-meter depth within 86 million-year-old sediment. The cell-specific respiration rate decreased with depth but stabilized at around 10(-3) femtomoles of O(2) cell(-1) day(-1) 10 meters below the seafloor. This result indicated that the community size is controlled by the rate of carbon oxidation and thereby by the low available energy flux.     

Recruitment of sympatric vendace (Coregonus albula) and whitefish (C. lavaretus) is affected by different environmental factors

Vendace and whitefish in Lake Osensjøen (boreal south‐east Norway) were studied by means of gillnet test fishing (1976–2013) and hydro acoustic acquisition (1986–2011). Vendace increased in number between 1998 and 2009 while growth and size at maturity decreased. The relative density of whitefish decreased in the pelagic habitat, whereas growth and size remained the same. Both species exhibited varying year‐class strength. Whereas strong year‐classes of both species became less frequent after 1980 than before this, this seemed to change after 2000, especially for vendace. Generalised additive models suggested a strong positive relationship between July/August mean air temperature and year‐class strength of both vendace and whitefish. Whitefish recruitment was also negatively affected by the new regulation regime implemented since 1981, and positively correlated with water level after hatching and by late ice off. The reason for the diverging impacts of environmental factors on the two species may be that vendace spawn in deeper waters that whitefish do. The results indicate that increasing summer temperatures benefit recruitment of both species, whereas low water level and early ice off will harm whitefish recruitment. Both trends are caused by climate warming. It may be speculated that increased density of the specialised plankton feeding vendace may affect the algal community through increased predation on herbivorous zooplankton and potentially affect the trophic state of the lake.     

Effects of bark mulch and npk fertilizer on yield,leaf nutrient status and soil mineral nitrogen during three years of strawberry production

The effects of bark mulch and NPK fertilizers on yield and leaf and soil nutrient status of ‘Korona’ strawberry plants (Fragaria×ananassa Duch.), were studied over a period of three years. A significant effect of mulching was found in the first harvest year, but additional fertilizer did not affect total yield. Bark mulch slightly decreased the level of leaf nitrogen, but increased the level of leaf phosphorus and potassium in all years. Bark had a significant, negative effect on soil nitrate and ammonium content in the two first seasons. Mulching increased the soil moisture content in all years.     

Calculation of urinary enzyme excretion, with renal structure and function in dogs with pyometra

The urinary enzyme markers of renal damage, alkaline phosphatase (AP), gamma-glutamyl transferase (GGT) and N-acetyl-beta-glucosaminidase (NAG), glomerular filtration rate (GFR) and renal biopsies were studied to evaluate renal status in dogs with pyometra. After ovariohysterectomy, urinary enzymes were measured daily for 12 days in 55 dogs, and again at a later follow-up visit. Thirteen dogs had high levels of at least one enzyme at initial presentation. Seventeen dogs had a transient increase in urinary enzyme values between one and five days after surgery. Enzyme values usually declined to low activities within 12 post-operative days. Renal biopsies demonstrated tubular abnormalities in many dogs. Mean GFR was 2.4 and 2.0 ml min(-1) kg(-1), respectively on day 1 post-operatively and at the follow-up visit 1-4 months later. High urinary enzyme values often reflected extensive lesions in renal proximal tubular cells and sometimes reduced GFR.