PCR-based suppression subtractive hybridization analyses of enantioselective gene expression in root tips of wheat treated with optically active urea compounds

The optically active urea compounds R- and S-1-α-methylbenzyl-3-p-tolylurea (R- and S-MBTU) have qualitatively different effects on plant physiology, especially in Gramineae plants. To elucidate the mechanisms by which S-MBTU inhibits root growth of wheat (Triticum aestivum L. var. Chinese Spring), we used PCR-based suppression subtractive hybridization (SSH) and quantitative real-time RT-PCR (qPCR) analyses. Genes related to amino acid biosynthesis, cell cycle and skeleton, protein synthesis, cell wall biosynthesis, glycolysis, signaling, DNA modification, and detoxification were enantioselectively regulated. These expression profiles suggested that the putative mode of action of S-MBTU is disruption of primary amino acid biosynthesis, especially the glutamine synthetase (GS)- and acetohydroxyacid synthase (AHAS)-enzyme systems, and disruption of cell membrane skeleton homeostasis related to a putative α-tubulin 2 (α-TUB2), a putative β-actin (ACT) and β-tubulin 1 (β-TUB1). Other genes specifically affected by S-MBTU may result in disruption of metabolic processes, leading to inhibition of root growth.     

Effect of annual rings on transmission of 100 GHz millimeter waves through wood

For the application of millimeter wave (MMW) technique to nondestructive evaluation of wood, the effect of annual rings on the behavior of a 100 GHz MMW transmitted through wood was examined. The complex amplitude was measured for 2 mm thick flat- (LT) and quarter-sawn (LR) specimens of several species with different annual ring structures at 11 % moisture content, of which the density distribution was measured using X-ray radiography. For the LT specimens of all species and the LR specimens with small density fluctuation or with earlywood width smaller than the wavelength of the MMW (=3 mm), the amplitude and phase of the transmitted wave were similar to those of the wave without a specimen. For the LR specimen with large density fluctuation and with earlywood width close to or larger than the wavelength, the amplitude and phase were different from those of the wave without a specimen. All the measured complex amplitudes were well expressed using a diffraction model. It was concluded that the MMW is deformed by the density distribution, and then its components with periods shorter than the wavelength by diffraction are attenuated.     

Notoedric mange in two free-ranging North American racoons (Procyon lotor) in Japan

Mange was diagnosed in two North American racoons (Procyon lotor) at Kamakura City in Kanagawa Prefecture, Japan. The mites were identified morphologically as Notoedres cati. Mite infestation affected the skin over the extremities and tail, and was characterized by moderate alopecia and erythematous dermatosis. Histopathologically, the affected skin showed marked epidermal hyperplasia and mites located within the parakeratotic stratum corneum. A slight dermal inflammatory response consisting principally of mononuclear cells was observed. N. cati mites were demonstrated in their tunnels using scanning electron microscopy (SEM). This is the first report of notoedric mange in racoons.     

Migration routes and important resting areas of Siberian cranes (Grus leucogeranus) between northeastern Siberia and China as revealed by satellite tracking

In 1995 and 1996 thirteen Siberian cranes (Grus leucogeranus) were fitted with satellite transmitters on the breeding grounds in northeastern Siberia. Eleven of these 13 birds were successfully satellite tracked, and five of these 11 provided complete migratory information from their breeding grounds in Yakutia, Siberia, to their wintering area at Poyang Lake, in China. Several stopover sites were identified, the most important being in Qiqihar-Baicheng (China), Shuangtaizi River delta (China), and Yellow River delta (China). Birds rested more frequently in Russia than in China, suggesting availability of suitable wetland habitat in Russia and absence of adequate, suitable wetland habitat in China. Wintering habitat in China also faces numerous threats. Habitats utilized by Siberian cranes are also important to other threatened wetland birds that have been satellite-tracked recently. If Siberian crane habitat needs fail to be addressed, this critically endangered species will be further endangered.     

Microhabitat differences in crab assemblage structures in a subtropical mangrove estuary on Iriomote Island,southern Japan

Crab assemblage structures in sandy flat, muddy flat and mangrove forest microhabitats in a mangrove estuary of the Urauchi River, Iriomote Island, southern Japan, differed clearly among the three microhabitats, species and individual numbers being greater inside the mangrove forest than on the flats. A similarity index showed distinct differences in species composition among the microhabitat assemblages, primarily due to the differential distributions of dominant species, such as the soldier crab Mictyris guinotae, sentinel crab Macrophthalmus convexus and sesarmid crab Perisesarma bidens. A canonical correspondence analysis indicated that the differences likely arose from among-microhabitat differences in the physical environment, the mangrove forest being characterized mainly by structurally complex mangrove roots, lower soil porewater temperatures and higher relative substrate elevation, the sandy flat by lower organic content of the sediment and higher porewater oxygen amount, and the muddy flat by higher levels of sediment water and organic material. The findings suggested that microhabitat-related physical differences are important factors determining crab distribution patterns in mangrove estuaries.     

Vascular changes associated with chorioretinal and optic nerve colobomas in rats (Crj: CD(SD), IGS)

OBJECTIVE: Three female adult rats (Crj: CD(SD) IGS) with colobomatous anomalies were investigated. MATERIALS AND METHODS: The microvascular changes of the coloboma were studied using the techniques of fluorescein angiography, histology and scanning electron microscopy (SEM) of vascular corrosion casts. RESULTS: Fluorescein angiography revealed the pits of the optic disk as a dark hole with some abnormalities in vessel arrangement. Light microscopy confirmed the presence of attenuated lamina cribrosa, retinal dysplasia and marked dilation of the retinal veins. SEM revealed that the optic disk coloboma formed a crater-like pit and that central retinal vessels ran a tortuous course along the bottom and side of the crater. Capillaries in the optic nerve head were missing in the affected area. The central retinal veins were thick and had various changes such as strangulation, rough surface structures, mural voids and evaginations, which represent loss of integrity of the vascular wall. CONCLUSIONS: These vascular changes that are associated with colobomatous anomalies may impede the retinal circulation and be responsible for the fluctuating fluorescein pattern during fluorangiogram of affected animals. The lesions of the vascular wall may increase the subretinal fluid due to the leakage of fluid, thus causing the maculopathy or serous retinopathy, which is frequently associated with posterior pole coloboma.     

Blastocyst production from in vitro-produced day-2 bovine embryos classified by cleavage stage, and cytogenetical evaluation of the resultant day-8 blastocysts

The present study was conducted to determine the criteria for selecting good quality embryos on Day-2 post-insemination and at the blastocyst stage. Bovine oocytes were matured, fertilized and cultured in vitro. First, Day-2 embryos were classified based on the number of blastomeres into 2-cell, 3- to 4-cell, 5- to 8-cell and >8-cell stage embryos; chromosome samples were then prepared. In the second experiment, the Day-2 embryos classified according to the number of blastomeres were cultured separately for an additional 6 days (Day 8). The resultant Day-8 blastocysts from each group of Day-2 embryos were classified into the following 3 grades based on morphology and diameter: Grade A, hatched and hatching blastocysts; Grade B, expanded blastocysts; and Grade C, unexpanded blastocysts. Chromosome samples were then prepared. The 5- to 8-cell stage Day-2 embryos had the lowest incidence of chromosomal abnormalities (13.5%, P<0.05) and the highest development rate to blastocysts (59.2%, P<0.05). Furthermore, the blastocysts derived from the 5- to 8-cell stage embryos had the largest mean number of cells (102.8+/-42.4, P<0.05), largest number of metaphases per blastocyst (9.5+/-4.8, P<0.05) and lowest incidence of chromosomal abnormalities (24.6%, P<0.05). The Grade A blastocysts had the largest mean number of cells (136.6+/-33.4, P<0.05), a large number of metaphases per blastocyst (11.9+/-5.5, P<0.05) and a low incidence of severe chromosomal abnormalities (17.3%). The results showed that, at Day 2, the 5- to 8-cell stage embryos were of better quality since they had the lowest incidence of chromosomal abnormalities and the highest blastocyst rate and the resultant blastocysts had the largest number of cells and lowest incidence of chromosomal abnormalities. In particular, selection of Grade A blastocysts can improve the development rate to term.     

Genomics-assisted breeding in fruit trees

Recent advancements in genomic analysis technologies have opened up new avenues to promote the efficiency of plant breeding. Novel genomics-based approaches for plant breeding and genetics research, such as genome-wide association studies (GWAS) and genomic selection (GS), are useful, especially in fruit tree breeding. The breeding of fruit trees is hindered by their long generation time, large plant size, long juvenile phase, and the necessity to wait for the physiological maturity of the plant to assess the marketable product (fruit). In this article, we describe the potential of genomics-assisted breeding, which uses these novel genomics-based approaches, to break through these barriers in conventional fruit tree breeding. We first introduce the molecular marker systems and whole-genome sequence data that are available for fruit tree breeding. Next we introduce the statistical methods for biparental linkage and quantitative trait locus (QTL) mapping as well as GWAS and GS. We then review QTL mapping, GWAS, and GS studies conducted on fruit trees. We also review novel technologies for rapid generation advancement. Finally, we note the future prospects of genomics-assisted fruit tree breeding and problems that need to be overcome in the breeding.