Empirical Orthogonal Function analysis of the palmer drought indices

The aim of the paper is to employ Empirical Orthogonal Function (EOF) analysis to drought indices including Palmer Drought Severity Index (PDSI), Palmer Hydrological Drought Index (PHDI), Palmer Moisture Anomaly (Z) Index (Z-Index), Weighted Palmer Drought Severity Index (WPDSI), and Water Deficit (P-PET) Index and to compare their resultant spatial patterns across Turkey. In this respect, the PDSI, PHDI, Z, WPDSI, Aridity Index (AI) and P-PET Index values are calculated based on observed monthly temperature and precipitation values of the 96 Turkish meteorological stations for the 1929-2009 period, and gridded available water holding capacities (AWHC) in 1-m soil depth are extracted from the soil data sets of the Oak Ridge National Laboratory Distributed Active Archive Centre (ORNL DAAC). By considering the strong match among the PDSI, PHDI, and WPDSI based on the results of the patterns of the first EOFs (EOF1) with the highest eigenvalue, we suggest that using and applying one of these drought indices could be adequate for a drought analysis in Turkey. On the other hand, it is evident that the significant results from the EOF2, EOF3 and EOF4 loadings of the PHDI and WPDSI indices have a similar pattern across Turkey. Therefore, with respect to the geographical autocorrelation and magnitudes of the loading values, it is explained that the PDSI and WPDSI in particular could have originated from the same physical process, and one may have a preference for the effective usage of a combination of PDSI, PHDI and Z-Index. Consequently, in a multi-purpose medium- and long-term drought management plan for Turkey or in any country having similar climatic and physical geographical conditions, using one of the three drought indices along with the Z-Index could be acceptable for successful applications.     

Quantifying the effect of inbreeding on average daily gain and Kleiber ratio in Mazandaran native chickens

Tropical Animal Health and Production - The aims of this study was to evaluate inbreeding effects for growth rate (average daily gain from hatch to 8 weeks of age (ADG1–8), average...     

Arbuscular mycorrhizal fungi improve the growth and phosphorus uptake of mung bean plants fertilized with composted rock phosphate fed dung in alkaline soil environment

Abstract

Inoculation effect of arbuscular mycorrhizal fungi (AMF) on phosphorus (P) transfer from composted dung of cattle with a diet supplemented with powdered rock phosphate (RP) and their successive uptake by mung bean plants was assessed in alkaline soil. The efficacy of composted RP fed dung alone or/and in combination with AMF inoculums containing six different species were compared with SSP in six replicates per treatment in pots. The results showed that the association of AMF with composted RP fed dung had a positive effect on mung bean shoot (3.04?g) and root (2.62?g) biomass, chlorophyll (a, b), carotenoid contents and N (58.38?mg plant^?1) and P (4.61?mg plant^?1) uptake. Similarly, the percent roots colonization (56%) and nodulation of mung bean plant roots and their post-harvest soil properties were also improved by the inoculation of AMF together with composted RP fed dung. It is concluded that the combined application of AMF with composted RP fed dung has almost the same effect as SSP for improving mung bean plants growth and their nutrients uptake. Moreover, AMF inoculants can be used as a suitable biofertilizer in combination with locally available organic sources of fertilizers for improving P status and growth of plants in alkaline soils.     

Low root zone temperature effects on bean (Phaseolus vulgaris L.) plants inoculated with Rhizobium leguminosarum bv. phaseoli pre-incubated with methyl jasmonate and/or genistein

Abstract

Methyl jasmonate (MeJA) has recently been shown to act as a plant-to-bacteria signal. We tested the hypothesis that pre-induction of Rhizobium leguminosarum bv. phaseoli cells with genistein and/or MeJA would at least partially overcome the negative effects of low root zone temperature (RZT) on bean nodulation, nitrogen fixation and plant growth. Otebo bean plants were grown at constant air temperature (25^oC) and two RZT regimes (25 and 17^oC) and inoculated with R. leguminosarum bv. phaseoli pre-induced with MeJA and/or genistein. Our results indicate that low RZT inhibited nodulation, nitrogen fixation and plant growth. The plants growing at low RZT began fixing nitrogen seven days later compared to those at higher RZT. The low RZT plants had fewer nodules, lower nodule weight, less N fixation, slower plant growth, fewer leaves, smaller leaf area, and less dry matter accumulation comared to plants at a higher RZT. Rhzobium leguminosarum bv. phaseoli cells induced with genistein and/or MeJA enhanced bean nodulation, nitrogen fixation and growth at both optimum and suboptimum RZTs. The results of this study indicate that MeJA improves bean nitrogen fixation and growth at both optimum and suboptimum RZTs, and can be used alone or in combination with genistein to partially overcome the low RZT induced inhibitory effects on nodulation and nitrogen fixation.     

Evaluation of management principles and performance of the System of Rice Intensification (SRI) in Bangladesh

Experiments were conducted at irrigated and rainfed lowland rice sites in Bangladesh to assess the performance of management practices that have become known as the System of Rice Intensification (SRI). At a research station, SRI management principles such as seedling age, plant spacing, application of organic manure, seedling densities, duration of planting, planting shape and time of planting were evaluated under SRI management as compared to previously established Best Management Practices (BMPs). In on-farm trials, SRI was compared with BMP on 40 farmers’ fields. Nutrient inputs and water management in BMP and SRI treatments were kept at comparable levels. Seedling age, ranging from just sprouted seed to 40-day-old seedlings, had no effect on grain yield in the winter season. In a plant spacing experiment subject to SRI, the highest and lowest grain yields of 7.82 and 5.41 t ha⁻¹ were obtained with spacing of 25 cm × 15 cm (narrow) and 40 cm × 40 cm (wide), respectively. In SRI, seedling density (1–2 seedlings per hill), planting durations (≤15 min to 1–3 h after uprooting) or root placement (L-shape and J-shape) had no effect on grain yield. With regard to time of planting, the highest grain yields were observed with transplanting in the 3rd week of December, with no difference between SRI and BMP management systems. In on-farm trials, BMP gave significantly higher grain yield compared to SRI and farmers’ practice in a triple-cropped area, but grain yields were similar with SRI in a double and single-cropped area when spacing was narrow. The highest profit was obtained with BMP followed by SRI and farmers’ practice in the single-cropping area. Major findings from this study are that under comparable levels of net nutrient input and water management (i) well-implemented BMPs for rice are more efficient for producing high yields than SRI and (ii) there is no intrinsic yield advantage of SRI that could be caused by its individual crop management techniques or some unknown synergism of the different SRI practices proposed.     

State of Urban Nurseries in Bangladesh: A Case Study from the North-Eastern Region

The state of urban seedling nurseries in the north-eastern region of Bangladesh is examined with a focus on production and profitability of the enterprises. Twenty-eight sample nurseries out of the 97 nursery enterprises in Sylhet town were selected at random, and operators personally interviewed. It was found that the entrepreneurs are not highly educated though they believed that a basic level of education is required to understand the management of young nursery stock. Labourers of various employment categories work in the enterprises and their wage is determined by their skill, gender and efficiency. Capital and operating costs vary among the enterprises according to land value, production capacity, infrastructure type and workforce size. Production capacity ranges from 10,000 to 5 M seedlings/year with an average 836,000, though actual average production is only 341,000 seedlings/year. The production cost per seedling ranges from Tk. 4 to 50 while sale value ranges from Tk. 10 to 60. The most frequently sold species are Acacia mangium, Swietenia macrophylla, Tectona grandis, Mangifera indica, Litchi chinensis and Cocos nucifera. Nursery techniques and cultural practices adopted by nursery operators depend on the type of species and its silvicultural requirement. Despite some problems, including lack of suitable land for nursery establishment and inadequate level of technical knowledge for high quality seedling management, it seems that production of tree seedlings is a promising profitable small-scale business in the study area.     

Consumption of shark products: The interface of sustainability,trade (mis)labelling,human health and human rights

Sharks and rays evolved 450 million years ago, during the Late Ordovician Period. However, during the modern Anthropocene, shark populations have declined at considerable rates, and recent global assessments indicate about one in three species is threatened with extinction. A notable reason for this elevated extinction risk is overfishing linked to increased demand for shark fins and other products. Here, we review multiple dimensions of consuming shark products, ranging from stock sustainability, product (mis)labelling and trade, the human health implications of consuming shark products, and illegal, unreported and unregulated fishing and slavery and labour abuses in the fishing industry. We conclude that traceability and increased transparency in seafood supply chains is essential to overcome obstacles to consumption of sustainable, ethical and healthy shark products. We also provide a decision tree outlining steps in consumer choice that would foster such consumption. Our aim is to provide a holistic view on issues concerning the consumption of shark products that will help policymakers, the public, management and law enforcement agencies to advocate for ecologically- and ethically sustainable consumption of shark products and thereby empower the general public to make informed decisions on which shark products they consume.     

Structural Effects of N-Arylcarbamoylpyrazolines on Calcium Uptake in Rat Brain Synaptosomes

N-Arylcarbamoylpyrazolines with various substituents at the para position of the carbamoyl benzene ring inhibited ATP-dependent Ca²⁺-uptake in synaptosomes prepared from the rat brain. The activity of these compounds was evaluated as log(1/I₅₀), the reciprocal logarithm of half inhibitory concentration, I₅₀ (m ), from the concentration–response curve for the inhibition of Ca²⁺-uptake. Among the compounds tested, methyl 3-(4-chlorophenyl)-4-methyl-1-[N-(4-trifluoromethylphenyl)carbamoyl]-2-pyrazoline-4-carboxylate was the most potent, the I₅₀ value of which as 9·12×10⁻⁷ m . Variations in the activity in terms of log(1/I₅₀) were quantitatively analysed using a substituent parameter, showing that the higher the electron-withdrawing effect of the substituent, the higher was the activity. The substituent effects were similar to those on insecticidal activity against the Americal cockroach. The higher the inhibitory activity against Ca²⁺ uptake, the higher seemed to be the insecticidal activity. Methyl(4S) - 3 - (4 - chlorophenyl) - 4 - methyl - 1 - [N - (4 - chlorophenyl)carbamoyl] - 2 - pyrazoline -4-carboxylate had higher inhibitory activity against Ca²⁺-uptake and higher in-secticidal activity than the R-isomer, but the difference was greater in theCa²⁺-uptake system.     

Effect of transferring lignocellulose-degrading bacteria from termite to rumen fluid of sheep on in vitro gas production,fermentation parameters,microbial populations and enzyme activity

The digestive tract of termite(Microcerotermes diversus) contains a variety of lignocellulose-degrading bacteria with exocellulases enzyme activity, not found in the rumen, which could potentially improve fiber degradation in the rumen. The objectives of the current study were to determine the effect of inoculation of rumen fluid(RF) with three species of bacteria isolated from termite digestive tract, Bacillus licheniformis, Ochrobactrum intermedium, and Microbacterium paludicola, on in vitro gas production(IVGP), fermentation parameters, nutrient disappearance, microbial populations, and hydrolytic enzyme activities with fibrous wheat straw(WS) and date leaf(DL) as incubation substrate. Inoculation of RF with either of three termite bacteria increased(P0.05) ammonia-N concentration compared with the control group(free of termite gut bacteria). Termite bacteria inoculation had no effect(P0.05) on gas production characteristics, dry matter, organic matter and neutral detergent fiber disappearance, pH, and concentration and composition of volatile fatty acids. Population of proteolytic bacteria and protozoa, but not cellulolytic bacteria, were increased(P0.05) when RF was inoculated with termite bacteria with both WS and DL substrates. Inoculation of RF with termite bacteria increased protease activity, while activities of carboxymethyl-cellulase, microcrystalline-cellulase, α-amylase and filter paper degrading activity remained unchanged(P0.05). Overall, the results of this study indicated that transferring lignocellulose-degrading bacteria, isolated from digestive tract of termite, to rumen liquid increased protozoa and proteolytic bacteria population and consequently increased protease activity and ammonia-N concentration in vitro, however, no effect on fermentation and fiber degradation parameters were detected. These results suggest that the termite bacteria might be rapidly lysed by the rumen microbes before beneficial effects on the rumen fermentation process could occur.     

Effects of AG1 and AG2 QTLs on Nonstructural Carbohydrate and Seed Management Options for Rice Seedling Growth and Establishment under Flooding Stress

Rice (Oryza sativa) plants acquired excess photosynthates in the form of nonstructural carbohydrates (NSCs) in their stems and grain. Despite keen interest in rice NSC, the dynamics of NSC accumulation, translocation and re-accumulation have not yet been well investigated. AG1 and AG2 QTLs associated with flooding tolerance through catalyzing starch into soluble sugar in germinating seeds. Here we conducted three experiments, greenhouse and field to lay the groundwork for large-scale diversity studies on grain NSC and some agronomic traits under direct-seeded rice (DSR) system, using elite lines incorporating AG1, AG2 and AG1-AG2 QTLs into the popular varieties PSB Rc82 and Ciherang-Sub1 along with the donors Kho Hlan On (AG1) and Ma-Zhan Red (AG2). In germinating seedlings, soluble sugars increased, while starch concentration decreased gradually especially in the tolerant checks and AG1-AG2 introgression lines under flooded soil. Soluble sugar accumulation in stem started to increase from the vegetative stage and peaked at the panicle initiation stage then gradually decreased towards the maturity stage. But Sub1-AG lines had higher sugar and starch concentrations at different growth stages than other genotypes in wet season 2016 and dry season 2017. Plant survival rate was positively correlated with the stem NSC at the early vegetative stage (21 days after sowing), and stem NSC was positively associated with plant height at different growth stages. Among the tested seeding rate, the most suitable seeding rate, 4 g/m² with shallow burial depth (0.5 cm), resulted in better seedling establishment, relatively higher seedling vigor index and higher leaf area index under flooding in DSR system. Introgression of AG1-AG2 QTLs had no any negative impact on nonstructural carbohydrate, germination rate, and growth and biomass production.