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31.
Mathieu Fortin Gaétan Daigle Chhun-Huor Ung Jean Bégin Louis Archambault 《European Journal of Forest Research》2007,126(4):573-585
This study proposes a within-subject variance-covariance (VC) structure to take into account repeated measurements and heteroscedasticity
in a context of growth modeling. The VC structure integrates a variance function and a continuous autoregressive covariance
structure. It was tested on a nonlinear growth model parameterized with data from permanent sample plots. Using a stand-level
approach, basal area growth was independently modeled for red spruce (Picea rubens Sarg.) and balsam fir [Abies balsamea (L.) Mill.] in mixed stands. For both species, the implementation of the VC structure significantly improved the maximum
likelihood of the model. In both cases, it efficiently accounted for heteroscedasticity and autocorrelation, since the normalized
residuals no longer exhibited departures from the assumptions of independent error terms with homogeneous variances. Moreover,
compared with traditional nonlinear least squares (NLS) models, models parameterized with this VC structure may generate more
accurate predictions when prior information is available. This case study demonstrates that the implementation of a VC structure
may provide parameter estimates that are consistent with asymptotically unbiased variances in a context of nonlinear growth
modeling using a stand-level approach. Since the variances are no longer biased, the hypothesis tests performed on the estimates
are valid when the number of observations is large. 相似文献
32.
Belayneh Ayalew Desalegne Kifle Dagne Gedil Melaku Boukar Ousmane Christian A. Fatokun 《Journal of Crop Science and Biotechnology》2017,20(2):107-128
The extent of genetic diversity and relatedness of cowpea germplasm from East Africa are poorly understood. A set of 13 microsatellites (SSR) and 151 single nucleotide polymorphisms (SNPs) markers were applied to assess the levels of genetic diversity in a sample of 95 accessions of local cowpea germplasm and inbred lines of Vigna unguiculata. The average genetic diversity (D), as quantified by the expected heterozygosity, was higher for SSR loci (0.52) than for SNPs (0.34). The polymorphic information content was 0.48 for SSR and 0.28 for SNP while the fixation index was 0.095 for SSR and 0.15 for SNPs showing moderate differentiation and high gene flow among cowpea accessions from East African countries. The results of data analysis of both SSR and SNP markers showed similar clustering patterns suggesting a substantial degree of association between origin and genotype. Principal coordinate analysis (PCoA) with SSR and SNP markers showed that accessions were grouped into two and three broad groups across the first two axes, respectively. Our study found that SNP markers were more effective than SSR in determining the genetic relationship among East African local cowpea accessions and IITA inbred lines. Based on this analysis, five local cowpea accessions Tvu-13490, Tvu-6378, Tvu-13448, Tvu-16073, and 2305675 were identified to be tightly clustered sharing several common alleles with the drought tolerant variety Danila when analyzed with SSR and SNP markers. The findings will assist and contribute to future genetic diversity studies aimed at the genetic improvement of local Eastern Africa cowpea accessions for improved overall agronomic performance in general and breeding for drought tolerant in particular. 相似文献
33.
Qunbiao Zhou Yaxin Sang Li Wang Shuangshang Ji Jing Ye Xianghong Wang 《Frontiers of Agriculture in China》2010,4(4):489-493
An efficient extraction method by ultrasound-assisted extraction (UAE) was developed for the extraction of polychlorinated
biphenyls (PCB 28, 52, 101, 118, 130, 153, 180) from various shellfish. Analytes were determined by gas chromatography-mass
spectrometry in selected ion monitoring (SIM) mode. All the samples were extracted by n-hexane and decontaminated by concentrated
sulfuric acid. The resulting samples were determined by quantitative detection by comparing with external standards. The average
recoveries of seven kinds of PCBs ranged from 80.92% to 93.89%, and the lowest detectable limit was 0.08-0.03 μg·kg−1. The average concentrations of total PCBs were 14.12–30.61 μg·kg−1 in the samples. This method was highly effective in reducing the cost and time for the pretreatment of samples. This method
may be applied for the screening and monitoring of shellfish for organic pollutants in coastal waters. 相似文献
34.
Laddawan Krongpong Kunihiko Futami Takayuki Katagiri Makoto Endo Masashi Maita 《Fisheries Science》2008,74(5):1055-1061
Furazolidone, an antibacterial drug that was once widely used in the livestock industry and aquaculture, is now prohibited
in numerous countries. It is difficult to detect residual furazolidone because it is readily metabolized in animal tissues
but, by using and liquid chromatography coupled with tandem mass spectrometry, its metabolite, 3-amino-2-oxazolidinone (AOZ)
can be detected. Here we describe the validity of an enzyme-linked immunosorbent assay (ELISA) kit to detect AOZ in Japanese
eel Anguilla japonica tissue. ELISA is capable of detecting AOZ at 1.0 μg/kg in an eel sample with excellent accuracy and precision. Our results
show that ELISA is suitable for regulatory purposes and for studying the fate of AOZ residues in eel treated with furazolidone.
To measure the persistence of AOZ in eel tissues, eels (1.4–6.5g) were immersed in tanks containing 2 and 10 mg furazolidone/L
for 3 h, and then maintained in a tank supplying well water for the next 160 days. The half-lives of AOZ, calculated from
the linear terminal part of the excretion curve, were 25.0 days in muscle and 21.6 days in liver from fish exposed to 2 mg/L
furazolidone. In the eels treated with 10 mg/L furazolidone, by contrast, high levels of AOZ were detected in liver and muscle,
but the half-lives of AOZ were similar to those in fish treated with 2 mg/L furazolidone. The half-lives of AOZ in eel tissues
were prolonged by the condition of low water temperature. 相似文献
35.
Mechanical insights into the effect of fluctuation in soil moisture on nitrous oxide emissions from paddy soil 总被引:1,自引:0,他引:1
Paddy fields are subjected to fluctuating water regimes as a result of the alternate drying and wetting water management, which often incurs a sensitive change in N2O emissions from paddy soils. However, how the soil moisture regulates the emission of N2O from paddy soil remains uncertain. In this study, three incubation experiments were designed to study the effects of constant and fluctuating soil moisture on N2O emission and the sources of N2O emission from paddy soil. Results showed that the N2O emission from paddy soil at 100 % WHC (water-holding capacity) was higher than that at 40, 65, 80, 120, and 160 % WHC, indicating that 100 % WHC was the optimum soil moisture content for N2O emission under the incubation experiment. Small peak of N2O flux appeared when the soil moisture content from 250 % WHC decreased near to 100 % WHC, lower than that triggered by nitrogen (N) fertilization, which was mainly owing to the low NH4 + concentration at this period. Nitrification dominated the emissions of N2O from paddy soil at 250 % WHC (54.96 %), higher than that of nitrification-coupled denitrification (6.74 %) and denitrification (38.3 %). The contribution of denitrification to N2O emissions (44.10 %) was equivalent to that of nitrification (44.45 %) in soil at 100 % WHC, which was higher than that of 250 % WHC treatment. In conclusion, the finding suggested that the peak of N2O in paddy soils during midseason aeration could be attributed to the occurrence of optimum soil moisture under sufficient N availability, favorable for the production and accumulation of N2O. 相似文献
36.
Victor O. Akinseye Muideen D. Adebayo Oghenekaro O. Genesis Olubukola D. Adelakun Simeon I. B. Cadmus 《Tropical animal health and production》2018,50(4):761-772
We evaluated the prevalence of mycobacterial infections (i.e., Mycobacterium bovis and non-tuberculous mycobacteria [NTM]) and their associated risk factors among cattle herds and trade cattle in southwestern Nigeria. Through cross-sectional study design, cattle herds from three locations were screened using the single intradermal comparative cervical tuberculin test based on two diagnostic standards; more than 4 mm (? 4 mm) and more than 2 mm (? 2 mm) cut-off points. Abattoir study involved screening trade cattle for tuberculous lesions. Overall, 515 cattle from 45 herds were screened. Using >?4 mm, animal level and herd prevalence of 11.7 and 46.7% were recorded, respectively. Applying the ? 2 mm cut-off, animal level and herd prevalence increased to 31.1 and 60.0%, respectively. Significantly, using the ? 2 mm cut-off, cattle in medium size herds/extensive management system (OR?=?1.6; 95% CI 1.1–2.5) and Sokoto Gudali (OR?=?2.3; 95% CI 1.4–3.8) were more at risk of being positive reactors, while Rahaji (OR?=?0.3; 95% CI 0.1–0.7) breeds of cattle and cows in the peri-urban area (OR?=?0.4; 95% CI 0.2–0.9) were less at risk of being positive reactors. Again, M. avium reactor of 21.7% was observed. In the abattoir, 1797 cattle were examined with 126 lesions suggestive of tuberculosis (TB). Culture/molecular analyses confirmed 2.2% M. bovis and 0.9% NTM infections. Risk factors associated with bovine TB among trade cattle were sex (OR?=?4.0; 95% CI 1.2–13.5) and age (OR?=?0.3; 95% CI 0.1–0.9). We confirm 11.7% prevalence of mycobacterial infections among populations of cattle screened with breed and herd size being major risk factors. 相似文献
37.
We investigated the soil and soil water chemistry in abandoned terraced paddy fields (reed stand) and a thicket of deciduous
broad-leaved trees (thicket stand) on the same slope in Sado Island, Japan. The soils gathered from these plots were incubated
under different water conditions to examine the dynamics of dissolved ions. The organic carbon pool in the soil in the reed
stand at the lower slope position was greater than the thicket stand at the middle slope position. The high concentration
of base cations and an almost neutral pH of the soil water at the reed stand corresponded with the high exchangeable cation
concentrations and base saturation in the soil. These results reflect the mineral-rich groundwater percolating down the slope,
which may be produced by chemical weathering. An in situ sulfate reduction in the reed stand at deeper soil horizons was identified.
The different water conditions in the incubated soils affected the soil pH(H2O), transformation of Fe, and dominant anions (NO3
−, HCO3
−, and SO4
2−). These biogeochemical processes were more conspicuous in the reed stand at the lower slope position where the concentrations
of organic matter and base cations were high. When the abandoned terraced paddy field is developed for the conservation of
the Japanese crested ibis (Nipponia nippon) habitat in Sado Island, the reductive subsoil at the lower slope position should be kept waterlogged to limit sulfuric acid
generation. 相似文献
38.
Takashi Naito Minoru Tanaka Satoshi Taba Tesuya Toyosato Atsushi Oshiro Kazuko Takaesu Kazuo Hokama Tomio Usugi Shinji Kawano 《Journal of General Plant Pathology》2007,73(2):139-141
In 1999, a disease of chrysanthemum [Dendranthema grandiflorum (Ramat.) Kitamura], characterized by virescence of flowers, occurred in Okinawa Prefecture. The causal agent was identified
as “Candidatus Phytoplasma aurantifolia” based on 16S rDNA sequencing.
The nucleotide sequence data reported are available in the DDBJ/EMBL/GenBank databases under accession number AB247462. 相似文献
39.
Breakdown and macroinvertebrate colonization of conifer needles (Cryptomeria japonica) and deciduous broadleaves (Euptelea polyandra) were investigated using litter bags in two study sites in streams flowing through a conifer plantation of C. japonica in Shikoku, southwestern Japan (one site with conifer canopy and another with mixed conifer and broadleaved canopy). Breakdown
rates and macroinvertebrate densities were compared between litter species (conifer needle vs broadleaf) and between the two
sites (conifer vs mixed canopy) to determine (1) whether breakdown rate of broadleaves is higher than conifer needles, (2)
whether macroinvertebrates prefer broadleaves to conifer needles, and (3) whether the difference in riparian canopy is reflected
in macroinvertebrate abundance. The results indicated that breakdown rates of broadleaves were higher than those of conifer
needles, suggesting poorer quality of the latter as food for macroinvertebrates. Differences in macroinvertebrate density
between needles and broadleaves were generally consistent with those in breakdown rates: broadleaves tended to have higher
densities than needles, suggesting that conifer needles were not preferred by macroinvertebrates. However, total macroinvertebrate
density in the conifer site was not significantly different from that in the mixed site, although the dominant shredder taxon
differed (conifer site: gammarids; mixed site: lepidostomatids). Although conifer needles are low-quality food for macroinvertebrates,
this may offer some advantages. Conifer needles remain on the streambed for longer periods owing to their lower breakdown
rates, being a constantly available resource. In addition, accumulations of conifer litter may effectively trap and retain
particulate organic matter. 相似文献
40.
Reto M Figueira ME Filipe HM Almeida CM 《Plant foods for human nutrition (Dordrecht, Netherlands)》2007,62(4):139-144
To evaluate the potential benefits and risks associated with tea consumption it is important to identify the constituents
of this beverage. Levels of some minerals, caffeine and catechins in green tea samples commercialized in Portugal were evaluated.
Potassium is the metal present in larger amount (92–151 mg/l). The content of sodium, calcium, fluoride, aluminium, manganese
and iron were 35–69, 1.9–3.5, 0.80–2.0, 1.0–2.2, 0.52–1.9, 0.020–0.128 mg/l, respectively. Chromium and selenium were not
detected. The resulting data showed considerable variability in catechins content. The levels of epigallocatechin gallate
(EGCG) ranged from 117 to 442 mg/l, epicatechin 3-gallate (EGC) from 203 to 471 mg/l, epigallocatechin (ECG) from 16.9 to
150 mg/l, epicatechin (EC) from 25 to 81 mg/l and catechin (C) from 9.03 to 115 mg/l. Caffeine contents in the green tea infusions
studied were between 141–338 mg/l. Green tea infusions provide significant amounts of catechins and could be an important
source of some minerals. 相似文献