Interannual differences in growth and hatch‐date distributions of early juvenile European anchovy in the Bay of Biscay: implications for recruitment

In order to understand better the recruitment variability in European anchovy in the Bay of Biscay, it is important to investigate the processes that affect survival during the early life stages. Anchovy juvenile growth trajectories and hatch‐date distributions were inferred over a 3‐year period based on otolith microstructure analysis. Otolith growth trajectories showed a characteristic shape depending on their hatch‐date timing. Earlier‐born juveniles had notably broader maximum increments than later born conspecifics, resulting in higher growth rates. This observation suggests that early hatching would be beneficial for larval and juvenile growth, and, therefore, survival. The estimated juvenile hatch‐date distributions were relatively narrow compared with the extended anchovy spawning season (March–August) in the Bay of Biscay and indicated that only individuals originated mainly from the summer months (June–August) survived until autumn. Hatch‐date distributions were markedly different among years and seemed to influence the interannual recruitment strength of anchovy. We conclude that years characterized by juvenile survivors originating from the peak spawning period (May and June) would lead to considerable recruitment success. Downwelling events during the peak spawning period seem to affect larval survival. Furthermore, size‐dependent overwinter mortality would be an additional process that regulates recruitment strength in the anchovy population in the Bay of Biscay.     

Litopenaeus vannamei (Boone) post-larval survival related to age, temperature, pH and ammonium concentration

Transport of post‐larvae shrimp used in aquaculture is an important element of successful cultivation because of the potential for stress during stocking procedures. To find optimum transport conditions, several bioassays were performed in the laboratory to evaluate survival of whiteleg shrimp Litopenaeus vannamei 5–30‐day‐old postlarvae under conditions similar to those encountered during transport from the hatchery to nursery and shrimp ponds. Postlarvae were exposed for 4 h to different temperatures and pH levels ammonia concentrations. Survival was significantly reduced after a 4 h exposure to pH 9 and was inversely related to temperature with or without 7 mg L^?1 of ammonia. The 15‐ and 20‐day‐old postlarvae had higher survival rates than other ages. The lowest survival occurred in alkali conditions (pH 9), with 7 mg L^?1ammonia at 30 and 32°C. To assure optimal survival of postlarvae during transfer from the hatchery to the nursery and shrimp ponds, we recommend temperatures below 28°C, pH no higher than 8, no ammonia and post‐larval age at least 15 days.     

The impact of thematic resolution on the patch-mosaic model of natural landscapes

We argue that thematic resolution, i.e., the level of categorical detail of a thematic map expressed by the number of classes included in the map legend, is an inherent component of the scale at which a landscape is analyzed. Changing the number of classes can change the configuration of the patch mosaic as much as changing the grain does. We address recent calls in this and other journals to deepen research in this topic. In particular, we report how thematic resolution affects the patchiness of mosaics representing natural landscapes, which have seldom been studied in this respect. We selected seven 50 × 50 km landscapes within national parks, each representative of a world biome. We applied an object-based unsupervised classification to Landsat TM imagery of these landscapes using increasing numbers of classes, between 2 and 50, and derived curves of mean patch size and patch density for each site. Our results are consistent with previous findings in that the patchiness of output mosaics increases monotonically with increasing thematic resolution, with a higher rate of increase up to eight classes that declines until it becomes roughly constant for more than 16 classes. However, this constant rate of increase is still considerable, meaning that, at least for natural landscapes, there is no threshold beyond which the patch-mosaic model is independent of the conceptual filter applied. This dependence on human fiat calls for re-thinking the patch-mosaic paradigm.     

Comparing theoretical irrigation requirement and actual irrigation for citrus in Florida

Florida ranks first in citrus production, with nearly 68% of all U.S. citrus growing in the season 2005-2006. Most of the citrus groves are located from central to south Florida, and agricultural irrigation permitting is regulated by three of Florida's five water management districts. Most of the permitting for citrus production in Highlands, Polk and Hillsborough counties is conducted by the Southwest Florida Water Management District (SWFWMD), and quantities are based on the District's AGMOD computer program. In 2003, the SWFWMD implemented new permit criteria so that permitted amounts were more representative of actual water use. This paper compares grower reported citrus irrigation water use in Highlands, Polk and Hillsborough counties from 1994 through 2005 with permitted and theoretical irrigation requirements calculated by a daily water balance. Two different sets of crop coefficients (K_c's) developed for citrus in Florida were compared in the daily soil water balance calculation of theoretical irrigation requirements. The percentage of irrigated area considered in this study ranged from 40 to 60% to simulate a range of grower practices. Meteorological data from two weather stations and additional rainfall information from 50 locations within the three counties was used in the water balance. Missing and error values in the meteorological historical record data were filled with weather generators. The multiannual average water consumption (including cold protection water use) from growers ranged from 243 (Hillsborough) to 406 mm (Highlands) and the multiannual average permitted irrigation requirement (without cold protection) ranged from 295 to 557 mm. The simulated gross irrigation requirements under different scenarios of location-K_c-wetted area were variable but mostly lower than the limits established by the district, except for some scenarios in Polk County, whose maximum simulated irrigation value reached 578 mm year⁻¹. In general, permitted limits recommended by the SWFWMD seem to be reasonable for the actual water use by growers in these counties.     

Influence of salinity in irrigation water on forage sorghum and soil chemical properties

Abstract

Soluble salts found in wastewater can be toxic when used for irrigation of forages. Thus, two greenhouse experiments were conducted to investigate effects of saline [CaCl₂NaCl (3:1, w:w)] treatments on soil chemical properties and ‘Dekalb FS‐5’ forage sorghum [Sorghum bicolor(L.) Moench]. Treatments for the first experiment consisted of a nonsaline control or 500 mL of a solution with an electrical conductivity (EC) of 10 dS m^?1 applied once. In the second experiment, treatments were salinity levels of 1.7,3.5,5.2,8.5, and 12.2 dS m^?1, applied in non‐nitrogenous Hoagland's solution as the sole source of irrigation. Both experiments were replicated four times. For both experiments forage sorghum was seeded in pots containing 7 kg of air‐dried Amarillo fine sandy loam soil. Sorghum survivability and plant height were measured. In the second experiment, water use by sorghum was also measured. Plants were harvested 7 wk after seeding, weighed, dried at 55°C, weighed, and ground for subsequent mineral analysis. After harvest, soil salinity, pH, and in the second experiment, extractable soil elements were determined. Soil salinity increased, while soil pH decreased, with the salinity treatments. Extracted soil calcium (Ca), magnesium (Mg), sodium (Na), potassium (K), manganese (Mn), and cadmium (Cd) increased while sulfur (S), iron (Fe), and copper (Cu) decreased, and aluminum (Al) and zinc (Zn) exhibited no change with increasing salinity. Sorghum aerial plant and root production decreased with increasing salinity. Plant Ca, strontium (Sr), Mn, and Cd levels increased with increasing salinity. In contrast, sorghum K, P, and S levels declined with increasing salinity.     

Seabird mortality at trawler warp cables and a proposed mitigation measure: A case of study in Golfo San Jorge, Patagonia, Argentina

We studied the interaction between seabirds and warp cables in the high-seas Argentine hake Merluccius hubbsi trawl fishery operating in Golfo San Jorge, Argentina, and tested the efficacy of a simple mitigation measure designed to reduce mortality at warp cables. Observations were made onboard hake trawlers during the height of the fishing season, between December 2004 and April 2005. Thirteen seabird species used food made available by fishing operations. The most frequent and abundant seabirds (% occurrence, mean maximum number per haul) were the Kelp gull Larus dominicanus (98.1%, 348.5) and the Black-browed albatross Thalassarche melanophrys (96.1%, 132.2). Contacts with warp cables were recorded for six species in 81.4% of hauls, with a mean number of contacts per haul of 14.4 ± 23.8 (range = 0-127). A total of 53 individuals were killed due to interactions with nets and cables, resulting in a total cable mortality rate of 0.14 birds/haul. Considering the fishery’s fishing effort, the estimated total number of birds killed during the study was 2703 (CV = 0.8), of which 306 (CV = 0.9) were killed due to contacts with warp cables (255 Kelp gulls and 51 Black-browed albatross). The tested device consisted of a plastic cone attached to each warp cable. In hauls with mitigation device, the number of contacts was reduced by 89% and no seabirds were killed. Mean distances between seabirds and cables were significantly larger in hauls with than without mitigation device (2.6 vs 0.9 m). The proposed device could be easily applied in this and other trawl fisheries operating in Argentine waters. Increased effort should be placed in implementing mitigation measures and the monitoring of cable related mortality associated to high-seas trawlers operating in the Argentine Continental Shelf.     

Soil Ca, Al, acidity and penetration resistance with subsoiling, lime and gypsum treatments

Abstract. Crop growth on strongly weathered soils is often limited by soil compaction in addition to aluminium toxicity and/or calcium deficiency. This study examines the effects of subsoiling, lime and gypsum on penetrometer resistance, acidity, aluminium and calcium levels and cotton ( Gossypium hirsutum L.) root growth on soils transitional between Cecil and Appling series (clayey, kaolinitic, thermic Typic Hapludults) in the Piedmont region of Georgia, USA. The main plots were subsoiled to depths of 0.35 or 0.80 m or untreated. Dolomitic limestone (0 or 4.03 t per hectare on subplots) and phosphogypsum (0 or 10 t per hectare on sub-subplots) were incorporated into the surface soil (0.15 m). Deep subsoiling (0.80 m depth) decreased penetrometer resistance at 0.3–0.5 m depth and increased yield in two of three years, but there was no response to shallow subsoiling (0.35 m depth). Lime increased yield when surface soil water pH prior to amendment was less than a Cate-Nelson critical value of 4.6. Gypsum moved downward much more rapidly than lime, increasing soil solution calcium ion activity to a depth of 0.8 m within 5 months of application. There were differences in clay content between replicate plots and calcium movement was faster where the clay content was less. Yield responses to gypsum in 1986 were attributed to increased root growth below 0.2 m resulting from the increased calcium ion activity. Yield response to gypsum in limed sub-subplots was significant only in 1986.     

Chemical comparison of goldenseal (Hydrastis canadensis L.) root powder from three commercial suppliers

The characterization of herbal materials is a significant challenge to analytical chemists. Goldenseal (Hydrastis canadensis L.), which has been chosen for toxicity evaluation by NIEHS, is among the top 15 herbal supplements currently on the market and contains a complex mixture of indigenous components ranging from carbohydrates and amino acids to isoquinoline alkaloids. One key component of herbal supplement production is botanical authentication, which is also recommended prior to initiation of efficacy or toxicological studies. To evaluate material available to consumers, goldenseal root powder was obtained from three commercial suppliers and a strategy was developed for characterization and comparison that included Soxhlet extraction, HPLC, GC-MS, and LC-MS analyses. HPLC was used to determine the weight percentages of the goldenseal alkaloids berberine, hydrastine, and canadine in the various extract residues. Palmatine, an isoquinoline alkaloid native to Coptis spp. and other common goldenseal adulterants, was also quantitated using HPLC. GC-MS was used to identify non-alkaloid constituents in goldenseal root powder, whereas LC-MS was used to identify alkaloid components. After review of the characterization data, it was determined that alkaloid content was the best biomarker for goldenseal. A 20-min ambient extraction method for the determination of alkaloid content was also developed and used to analyze the commercial material. All three lots of purchased material contained goldenseal alkaloids hydrastinine, berberastine, tetrahydroberberastine, canadaline, berberine, hydrastine, and canadine. Material from a single supplier also contained palmatine, coptisine, and jatrorrhizine, thus indicating that the material was not pure goldenseal. Comparative data for three commercial sources of goldenseal root powder are presented.     

Survival of bacterial DNA and culturable bacteria in archived soils from the Rothamsted Broadbalk experiment

Dried soil samples from many sources have been stored in archives world-wide over the years, but there has been little research on their value for studying microbial populations. Samples collected since 1843 from the Broadbalk field experiment on crop nutrition at Rothamsted have been used to document changes in the structure and composition of soils as agricultural practices evolve, also offering an invaluable record of environmental changes from the pre- to post-industrial era in the UK. To date, the microbial communities of these soils have not been studied, in part due to the well-documented drop in bacterial culturability in dried soils. However, modern molecular methods based on PCR amplification of DNA extracted directly from soil do not require bacterial cells to be viable or intact and may allow investigations into the legacy of bacteria that were present at the time of sample collection.

In a preliminary study, to establish if dried soils can provide a historical record of bacterial communities, samples from the Broadbalk soil archive dating back to 1868 were investigated and plots treated with either farmyard manure (FYM) or inorganic fertilizer (NPK) were compared. As anticipated, the processes of air-drying and milling greatly reduced bacterial viability whilst DNA yields declined less and may be preserved by desiccation. A higher proportion of culturable bacteria survived the archiving process in the FYM soil, possibly protected by the increased soil organic matter. The majority of surviving bacteria were firmicutes, whether collected in 2003 or in 1914, but a wide range of genera was detected in DNA extracted from the samples using PCR and DGGE of 16S rRNA genes. Analysis of DGGE band profiles indicated that the two plots maintained divergent populations. Sequence analysis of bands excised from DGGE gels, from a sample collected in 1914, revealed DNA from - and β-proteobacteria as well as firmicutes. PCR using primers specific for ammonia oxidizing bacteria showed similar band profiles across the two treatments in recently collected samples, however older samples from the NPK plot showed greater divergence. Primers specific for the genus Pseudomonas were designed and used in real-time quantitative PCR to indicate that archived soil collected in 1868 contained 10-fold less pseudomonad DNA than fresh soil, representing around 10⁵ genomes g⁻¹ soil. Prior to milling, dramatically less pseudomonad DNA was extracted from recently collected air-dried soil from the NPK compared to the FYM plot; otherwise, the two plots followed similar trends. Overall bacterial abundance, diversity and survival during the archiving process differed in the two soils, possibly due to differences in clay and soil organic matter content. Nevertheless, the results demonstrate that air-dried soils can protect microbial DNA for more than 150 years and offer an invaluable resource for future research.     

Starving the soil of plant inputs for 50 years reduces abundance but not diversity of soil bacterial communities

If soil communities rely on plant-derived carbon, is biodiversity lost when this primary source is removed? Soil microbial and mesofaunal communities at the Rothamsted Highfield site were compared under a mixed grass sward, arable rotation and a section maintained as a bare-fallow for the past 50 years by regular tillage. Organic matter reserves have been degraded and microbial and mesofaunal numbers and mite diversity have declined in this unique bare-fallow site, where fresh carbon inputs have been drastically reduced. However, it supports a species-rich metabolically active bacterial community of similar diversity to that in soil maintained as grass sward. Thus in contrast to soil mesofauna, bacterial diversity (but not abundance) is apparently independent of plant inputs.