Crop height variability detection in a single field by multi-temporal terrestrial laser scanning

Information on crop height, crop growth and biomass distribution is important for crop management and environmental modelling. For the determination of these parameters, terrestrial laser scanning in combination with real-time kinematic GPS (RTK–GPS) measurements was conducted in a multi-temporal approach in two consecutive years within a single field. Therefore, a time-of-flight laser scanner was mounted on a tripod. For georeferencing of the point clouds, all eight to nine positions of the laser scanner and several reflective targets were measured by RTK–GPS. The surveys were carried out three to four times during the growing periods of 2008 (sugar-beet) and 2009 (mainly winter barley). Crop surface models were established for every survey date with a horizontal resolution of 1 m, which can be used to derive maps of plant height and plant growth. The detected crop heights were consistent with observations from panoramic images and manual measurements (R² = 0.53, RMSE = 0.1 m). Topographic and soil parameters were used for statistical analysis of the detected variability of crop height and significant correlations were found. Regression analysis (R² < 0.31) emphasized the uncertainty of basic relations between the selected parameters and crop height variability within one field. Likewise, these patterns compared with the normalized difference vegetation index (NDVI) derived from satellite imagery show only minor significant correlations (r < 0.44).     

Determinants for successful reforestation of abandoned pastures in the Andes: Soil conditions and vegetation cover

The Andes of Ecuador are known for their outstanding biodiversity but also as the region with the highest deforestation rate in South America. This process is accompanied by accelerating degradation and loss of environmental services. Despite an extraordinary richness in native tree diversity, more than 90% of all forest plantations established in Ecuador consist of exotic species, primarily Eucalyptus spp. and Pinus spp. This is mainly due to the lack of information about the autecological and synecological requirements of the native species.     

Chemistry of the Nudibranch Aldisa andersoni: Structure and Biological Activity of Phorbazole Metabolites

The first chemical study of the Indo-Pacific dorid nudibranch Aldisa andersoni resulted in the isolation of five chlorinated phenyl-pyrrolyloxazoles belonging to the phorbazole series. Two new molecules, 9-chloro-phorbazole D and N1-methyl-phorbazole A, co-occurring with known phorbazoles A, B and D, have been characterized. Phorbazoles were found to be present mainly in the external part of the mollusc. The structures of the new compounds were determined by interpretation of spectroscopic data, mainly NMR and mass spectrometry and by comparison with the literature data. Evaluation of feeding-deterrence activity as well as in vitro growth inhibitory properties in human cancer cells was also carried out.     

A new set of microsatellite markers for Fragaria species and their application in linkage analysis

Summary

This study reports the development of 68 new microsatellite markers. Of these, 45 were obtained, together with 20 others already published, from an AC-enriched genomic library of the wild strawberry Fragaria vesca. The 68 markers were tested for transportability to the cultivated strawberry F. ananassa ‘Miss’ and 83% gave positive amplifications. Twenty pairs of primers were selected and tested for their transportability to 16 Fragaria taxa and eight species of Rosaceae (peach, almond, apricot, European and Sino-Japanese plums, sweet and sour cherry, apple). The average proportion of primers amplifying loci in Fragaria was 69%, while the transportability to Rosaceae was very low and resulted in null amplification for 80% of the primer pairs. In addition, 23 microsatellite markers were developed from F. ananassa ‘expressed sequence tags’ databases. A total of 141 primer pairs from these and published primers, were tested for polymorphism in the two parents (91.333.2 and ‘Snovit’; both belonging to F. vesca) of a full sib population of 46 individuals. Fifty-eight percent of the primers were discarded because they were monomorphic, or were difficult to interpret, or their allelic conformation was not useful for mapping. The segregation of 73 primers was tested in the progeny and a partial map of the female parent was constructed, based on the segregation of 66 useful markers that were ordered into eight linkage groups of which four had from seven to 14 markers.     

Can mineral and organic fertilization help sequestrate carbon dioxide in cropland?

The soil organic matter content represents a huge reservoir of plant nutrients and an effective safeguard against pollution; beside it can sequestrate atmospheric CO₂. Since 1966 up to now in the Southeast Po valley (Italy), the soil organic C (SOC) and total N (TN) dynamics in the 0–0.40 m soil layer under a maize–wheat rainfed rotation are studied as influenced by organic and mineral N fertilizations. Every year in the same plots cattle manure, cattle slurry, and crop residues (i.e. wheat straw and maize stalk) are ploughed under to 0.40 m depth at a same dry matter rate (6.0 and 7.5 t DM ha⁻¹ year⁻¹ after wheat and maize, respectively) and are compared to an unamended control. Each plot is splitted to receive four rates of mineral fertilizer (0–100–200–300 kg N ha⁻¹). In the whole experiment, in 2000 SOC concentration was lower than in 1966 (6.77 and 7.72 g kg⁻¹, respectively), likely for the deeper tillage that diluted SOC and favoured mineralization in deeper soil layer. From 1972 to 2000 SOC stock did not change in the control and N fertilized plots, while it increased at mean rates of 0.16, 0.18, and 0.26 t ha⁻¹ year⁻¹ with the incorporation of residues, slurry and manure, corresponding to sequestration efficiencies of 3.7, 3.8 and 8.1% of added C with the various materials. TN followed the same SOC dynamic, demonstrating how it depends on the soil organic matter. Manure thus confirmed its efficacy in increasing both SOC content and soil fertility on the long-term. In developed countries, however, this material has become scarcely available; slurry management is expensive and implies high environmental risks. Moreover, in a C balance at a farm (or regional) scale, the CO₂ lost during manure and slurry stocking should be considered. For these reasons, the incorporation of cereal residues, even if only a little of their C content was found capable of soil accumulation, appears the best way to obtain a significant CO₂ sequestration in developed countries. Our long-term experiment clearly shows how difficult it is to modify SOC content. Moreover, because climate and soil type can greatly influence SOC dynamic, to increase CO₂ sequestration in cropland, it is important to optimize the fertilization within an agricultural management that includes all the agronomic practices (e.g. tillage, water management, cover crops, etc.) favouring the organic matter build up in the soil.     

Responses of the parthenogenetic isopod, Trichoniscus pusillus (Isopoda: Oniscidea), to changes in food quality

Long-term observations of Trichoniscus pusillus revealed that chemical composition and microbial activity of the leaf litter serving as food influenced the reproductive success of females and the mortality rates of juveniles as well. Of the food sources investigated, only alder litter, exhibiting high microbial activity, allowed the maintenance of a stable population with frequently reproducing females. This study concludes that the food type is a significant factor for population parameters of this parthenogenetic isopod. Our results on T. pusillus, belonging to the taxon Synocheta, are compared with data on terrestrial isopod species of the taxon Crinocheta.     

Leukocyte numbers and intestinal mucosal morphometrics in horses with no clinical intestinal disease

Healthy horses and other animals have large numbers of resident leukocytes in the intestinal wall, but there is scant information regarding which and how many leukocytes are normally present in the equine intestinal wall. Our aim was to provide a reference range of leukocytes in the intestinal mucosal and submucosal propria of normal horses. We included in our study intestinal tissues from 22 Thoroughbred racehorses with no clinical intestinal disease, which had been euthanized because of catastrophic musculoskeletal injuries. Neutrophils, lymphocytes, eosinophils, macrophages, and plasma cells were counted in 5 random 17,600-µm² areas of villus lamina propria of the duodenum, jejunum, and ileum, and deep lamina propria of the duodenum, jejunum, ileum, right ventral colon, left ventral colon, left dorsal colon, right dorsal colon, and small colon. Other features investigated in the same intestinal segments included villus height and width (small intestine), presence of ciliated protozoa, Paneth cells number, subcryptal leukocyte layers (number of leukocyte layers between the bottom of the crypts and the muscularis mucosae), and submucosal leukocytes. Lymphocytes were the most numerous cells in all segments analyzed, followed by plasma cells, eosinophils, macrophages, and neutrophils. Eosinophil numbers were significantly higher in both lamina propria and submucosa of the large intestine than in the small intestine. The duodenum had shorter and thinner villi than either jejunum or ileum. The data provided from our study will be useful for diagnosticians examining inflammatory processes in the intestinal tract of horses.     

Spread of levan-positive populations of <Emphasis Type="Italic">Pseudomonas savastanoi</Emphasis> pv. <Emphasis Type="Italic">savastanoi</Emphasis>, the causal agent of olive knot,in central Italy

Mixtures of wet vegetable wastes (Brassica, carrot or onion) and dry onion waste were composted at 50 °C for 7 days. The incorporation of the raw or composted vegetable waste mixtures into sandy loam, silt and peat soils reduced the viability of sclerotia of S. cepivorum in glasshouse pot bioassays. The reduction in viability was dependent on waste type, rate of incorporation, duration of exposure and soil type. Onion waste was the most effective waste type in reducing sclerotia viability in all three soils. The Brassica and carrot wastes were as effective as the onion waste in silt soil but less effective in sandy loam and peat soil. A 50% w/w incorporation rate of the wastes gave the largest reduction in viability, with an increase in reduction over time. Composted onion waste reduced sclerotia viability under glasshouse and field conditions although the effect was smaller in the field. Composted onion waste incorporated into soil at 50% w/w reduced the incidence of Allium white rot on onion seedlings in glasshouse pot tests. Incidence and control of the disease differed with soil type. The most consistent control was achieved in peat soil whereas no control was observed in silt soil. Incorporation of the waste 2 months prior to sowing or transplanting reduced seedling emergence in sandy loam soil and growth in all three soil types. The potential for field application of composted vegetable wastes as a sustainable method for control of Allium white rot and waste disposal is discussed.