A New Micromonospora Strain with Antibiotic Activity Isolated from the Microbiome of a Mid-Atlantic Deep-Sea Sponge

To tackle the growing problem of antibiotic resistance, it is essential to identify new bioactive compounds that are effective against resistant microbes and safe to use. Natural products and their derivatives are, and will continue to be, an important source of these molecules. Sea sponges harbour a diverse microbiome that co-exists with the sponge, and these bacterial communities produce a rich array of bioactive metabolites for protection and resource competition. For these reasons, the sponge microbiota constitutes a potential source of clinically relevant natural products. To date, efforts in bioprospecting for these compounds have focused predominantly on sponge specimens isolated from shallow water, with much still to be learned about samples from the deep sea. Here we report the isolation of a new Micromonospora strain, designated 28ISP2-46^T, recovered from the microbiome of a mid-Atlantic deep-sea sponge. Whole-genome sequencing reveals the capacity of this bacterium to produce a diverse array of natural products, including kosinostatin and isoquinocycline B, which exhibit both antibiotic and antitumour properties. Both compounds were isolated from 28ISP2-46^T fermentation broths and were found to be effective against a plethora of multidrug-resistant clinical isolates. This study suggests that the marine production of isoquinocyclines may be more widespread than previously supposed and demonstrates the value of targeting the deep-sea sponge microbiome as a source of novel microbial life with exploitable biosynthetic potential.     

干旱区土壤螨类群落多样性及其与环境因子的相关性分析

【目的】研究干旱区土壤环境因子对土壤螨类群落多样性的影响,对鄯善县7种不同生境进行土壤螨类群落调查与环境因子测定。【方法】采用改良的Tullgren法分离收集土壤螨类,并用Pearson相关分析和典范对应分析方法对土壤螨类群落多样性特征及其与环境因子之间进行相关分析。【结果】共捕获土壤螨类成体标本26 637只,隶属于4目69科98属。7种不同生境之间土壤螨类群落多样性指标均有极显著差异(P<0.001),其中Shannon-Wiener多样性指数(H)依次为防护林＞葡萄园＞杏园＞苜蓿地＞草地＞耕地＞菜地。CCA分析结果表明,第一主轴和第二主轴分别解释了土壤螨类主要群落总变量的29.7%和17.1%,与环境因子的相关性系数分别为0.926和0.929,前两轴共解释了土壤螨类物种类与环境因素关系的92.9%。蒙特卡罗置换检验显示,10个土壤主要理化性质与第一排序轴(F=4.31,P=0.002)和全部排序轴(F=2.68,P=0.002)均存在极显著的相关性。【结论】鄯善县7种不同生境土壤螨类群落多样性与土壤含水量、有机质、容重及全氮含量呈显著相关(P<0.05),其中土壤含水量、全氮和有机质含量对螨类群落结构和多样性的影响显著。     

Shocks in ion sputtering sharpen steep surface features

We report a regime of ion beam sputtering that occurs for sufficiently steep slopes. High slopes propagate over large distances without dissipating the steepest features. Both the propagation velocity and the dynamically selected slope are universal, independent of the details of the initial shape of the surface. The resulting behavior can be understood as the propagation of a shock front that self-selects a stable slope, as has been previously observed in thin-film fluid flows. Experiments confirm predictions of the theory. An important implication of the propagative behavior at high surface slopes is that a pattern can be fabricated at a large length scale and, through uniform ion irradiation, reduced to a smaller length scale while preserving, or even sharpening, the sharpest features.     

Detection,isolation and characterization of cowpea mosaic virus in Egypt

Journal of Plant Diseases and Protection - Cowpea mosaic virus is among the most economically important viruses infecting cowpea. Incidence of infection was assessed in two governorates in Egypt,...     

Mechanism of hydantoin ring opening in iprodione in aqueous media

The hydrolysis kinetics of iprodione in alkaline solutions of pH 8.3 to 12 at 25°C have been determined by ultraviolet spectrophotometry. Under these conditions, iprodione leads quantitatively and irreversibly to N-(3,5-dichloroanilinocarbonyl)-N-(isopropylaminocarbonyl)glycine. The reaction is not subject to a general basic catalysis and the rate law takes the form K_obs = K_OH- [OH^?1]. The activation entropy of -77 J mol^?1deg^?1, the value of the kinetic solvent isotope effect k_OH?/k_OD? of 0.79 and the value of 0.60 for the Hammett parameter σ, obtained for the hydrolysis of a series of 3-aryl-N-isopropyl-2,4-dioxoimidazolidine-1-carboxamides are all in agreement with the rate-determining attack by the hydroxyl ion on the carbonyl in the 4-position of the hydantoin ring of the fungicide.     

Fungal Bergamotane Sesquiterpenoids—Potential Metabolites: Sources,Bioactivities, and Biosynthesis

The marine environment represents the largest ecosystem on the Earth’s surface. Marine-derived fungi are of remarkable importance as they are a promising pool of diverse classes of bioactive metabolites. Bergamotane sesquiterpenoids are an uncommon class of terpenoids. They possess diverse biological properties, such as plant growth regulation, phototoxic, antimicrobial, anti-HIV, cytotoxic, pancreatic lipase inhibition, antidiabetic, anti-inflammatory, and immunosuppressive traits. The current work compiles the reported bergamotane sesquiterpenoids from fungal sources in the period ranging from 1958 to June 2022. A total of 97 compounds from various fungal species were included. Among these metabolites, 38 compounds were derived from fungi isolated from different marine sources. Furthermore, the biological activities, structural characterization, and biosynthesis of the compounds are also discussed. The summary in this work provides a detailed overview of the reported knowledge of fungal bergamotane sesquiterpenoids. Moreover, this in-depth and complete review could provide new insights for developing and discovering new valuable pharmaceutical agents from these natural metabolites.     

Diversity of Macrophomina phaseolina from cotton in Egypt: Analysis of pathogenicity,chlorate phenotypes,and molecular characterization

Journal of Plant Diseases and Protection - Pathogenicity of 21 isolates of Macrophomina phaseolina was tested on three cotton cultivars under greenhouse conditions. Analysis of variance (ANOVA)...     

Application of the consolidated species concept to identify the causal agent of strawberry anthracnose in Iran and initial molecular dating of the <Emphasis Type="Italic">Colletotrichum acutatum</Emphasis> species complex

Anthracnose caused by Colletotrichum spp. is one of main strawberry diseases worldwide. The disease recently arrived in Iran and become epidemic in the Kurdistan province. A combination of morphological, molecular and pathogen-host interaction approaches (referred to the consolidated species concept) were applied to isolates from symptomatic strawberry tissues collected in Iran. Multi-gene phylogenetic analysis based on ITS-rDNA, beta-tubulin (TUB2) and glyceraldehyde-3-phosphate dehydrogenase (GAPDH) identified the species as the S5 clade of Colletotrichum nymphaeae. No significant intraspecies variation was observed in terms of morphology and pathogenicity. No significant genetic variation was observed among the isolates using inter simple sequence repeat analysis (ISSR) and primer pair combination of ERIC1/BOX and ERIC2/BOX fingerprinting markers. Based on the results of this study, it can be postulated that the C. nymphaeae population in Iran established itself from a single origin due to a founder effect. More generally, molecular dating based on relaxed clocks indicates co-radiation of C. nymphaeae S5 and strawberry plants and suggests high reciprocal specificity between the host and pathogen.