Root‐associated microbes in sustainable agriculture: models,metabolites and mechanisms

Since the discovery of penicillin in 1928 and throughout the ‘age of antibiotics’ from the 1940s until the 1980s, the detection of novel antibiotics was restricted by lack of knowledge about the distribution and ecology of antibiotic producers in nature. The discovery that a phenazine compound produced by Pseudomonas bacteria could suppress soilborne plant pathogens, and its recovery from rhizosphere soil in 1990, provided the first incontrovertible evidence that natural metabolites could control plant pathogens in the environment and opened a new era in biological control by root‐associated rhizobacteria. More recently, the advent of genomics, the availability of highly sensitive bioanalytical instrumentation, and the discovery of protective endophytes have accelerated progress toward overcoming many of the impediments that until now have limited the exploitation of beneficial plant‐associated microbes to enhance agricultural sustainability. Here, we present key developments that have established the importance of these microbes in the control of pathogens, discuss concepts resulting from the exploration of classical model systems, and highlight advances emerging from ongoing investigations. © 2019 Society of Chemical Industry     

Simulating forest cover change in the northeastern U.S.: decreasing forest area and increasing fragmentation

Landscape Ecology - Understanding how the Northern Forest landscape has changed and is likely to change, both in terms of forest extent and forest configuration, has important implications for...     

Landscape-level naturalness of conservation easements in a mixed-use matrix

Context

With underrepresentation of habitats in publicly protected areas, attention has focused on the function of alternative land conservation mechanisms. Private conservation easements (CEs) have proliferated in the United States, yet assessing landscape-level function is confounded by varying extent, resolution, and temporal scale.

Objectives

We developed and tested an assessment tool to evaluate interacting spatial, social, and environmental attributes of easements relative to the degree of human modification (HM). We hypothesized that on both private and public conservation properties HM would be lower than on non-conserved parcels, and that for fine-scale features (most CEs), the level of HM would be driven by the variables used to create the coarser scale HM measure.

Methods

Variation in HM between private, public, and non-conserved was tested via pairwise parcel sampling. Composition was evaluated using multiple geographic bounds and edge characteristics. We assessed both environmental and social predictors using multinomial logistic regression.

Results

Privately conserved lands did not differ significantly from non-conserved lands. Publicly conserved lands had lower HM than both privately conserved and non-conserved lands. Edge contrast was similar between private and matched non-conserved patches. The level of HM was not driven by distance to roads, or by elevation in this mixed-use setting.

Conclusions

Variation in tests for differences, land characteristics, and HM variables confirmed the significantly lower HM of publicly protected lands, and opens the question as to naturalness of easements in some contexts. CEs in this location may be representative of the mixed rural-forested landscape instead of more natural land cover.

     

Climate change will affect the ability of forest management to reduce gaps between current and presettlement forest composition in southeastern Canada

Landscape Ecology - Forest landscapes at the boreal–temperate ecotone have been extensively altered. Reducing the gap between current and presettlement forest conditions through...     

Drivers of fine-scale avian functional diversity with changing land use: an assessment of the effects of eco-estate housing development and management

Landscape Ecology - The effects of changing land use, and especially urbanisation, on species and functional diversity are of global concern. Eco-estates are a form of urban housing development...     

多糖和寡糖的体外发酵特性及其对鸡盲肠微生物菌群的影响

本研究采用体外累积发酵产气法和16SrDNA指纹图谱鉴定技术研究了来自香菇、银耳和黄芪的天然免疫活性多糖(LenE,TreE和AstE)及酵母胞壁甘露寡糖(MOS)对鸡肠道微生物菌群及其发酵特性的影响。结果表明,三种多糖提取物的总糖含量均占干物质的60%以上,而MOS总糖含量在90%以上。多糖和寡糖具有不同的发酵模式;MOS、AstE和LenE三种糖的发酵模式相似,呈一阶段发酵模式;TreE呈两阶段的发酵模式。三种糖中,MOS和AstE发酵速度较TreE快。MOS和AstE在发酵后总VFA产量最高,pH最低;黄芪多糖发酵后产生较多的直链脂肪酸和较低的氨。这些多糖和寡糖提取物影响肠道微生物的活性和组成成分,体现在发酵模式和发酵终产物的显著改变上。以上研究结果表明,来自香菇、银耳和黄芪的天然免疫活性多糖(LenE,TreE和AstE)及酵母胞壁甘露寡糖(MOS)在体外发酵后,均具有显著改变鸡盲肠微生物发酵终产物的含量和盲肠微生物活性的作用。     

Arsenate Displacement from Fly Ash in Amended Soils

Arsenic (As) is the biggest environment contaminant in most of the soils where fly ash is applied. Usually, it is not mobile and strongly adsorbed on to soil particles. However, in gypsum and phosphorus amended soils As may be much more mobile. A study in repacked columns was conducted to determine whether or not As becomes mobile when Ca(H₂PO₄)₂and CaSO₄are used as leaching solutions, and to compare the competitive interactions between PO₄-AsO₄and SO₄-AsO₄. Arsenic concentration in leachate was found to be approximately ten times greater when Ca(H₂PO₄)₂was used to leach the columns as compared to CaSO₄. A maximum concentration of 800 μg As L^-1was found in the leachate in this case, which is much higher than the groundwater limit of 50 μg L^-1for drinking water established by the United States Environmental Protection Agency. In fly ash, the portion of arsenate non-specifically adsorbed is believed to be much lower than that of specifically adsorbed. Sulfate anions were able to displace only non-specifically adsorbed arsenate. In this case the concentration of As in leachate was found to be within acceptable limits. On the other hand, phosphate can compete with arsenate for all available adsorption sites, non-specific and specific. Phosphate displacement of both forms of arsenates increases As mobility in both control and fly ash treatments.     

Avoidance of low pH and elevated Al concentrations by Brook Charr (Salvelinus fontinalis) Alevins in laboratory tests

Laboratory studies were conducted to test the ability of brook charr (Salvelinus fontinalis) alevins, the earliest free-swimming life stage of the species, to detect and avoid toxic levels of H⁺ and inorganic Al. Alevins were tested in steep gradient choice tanks using a range of H⁺ (pH 4.0 to 5.5) and Al (0 to 500 μg L^?1) concentrations in low Ca (2.0 mg L^?1) water. The young brook charr actively avoided acidic water with a pH < 5.0. Aluminum additions of 500 μg L^?l increased the avoidance response. The observed behavioral response of alevins to low pH and elevated levels of Al, may be of significant adaptive advantage in systems undergoing acidification.