A novel cytometric approach to study intestinal mucosa rebuilding in weaned pigs fed with dietary nucleotides

In the weaning period, transition from sow's milk to the post-weaning diet causes the withdrawal of important nutrients as milk nucleotides, which are known to be determinant for the development of the gastrointestinal tract and immune function. The role of dietary nucleotides in the rebuilding of gut epithelium remains unclear. The aim of the study was to evaluate using appropriate markers the rate of mitosis (Ki67) in the crypt epithelial cell, and the rate of apoptosis (active caspase 3), autophagy (MAP I LC3) and DNA damage (p53) in the crypt and villi epithelial cells of the small intestine of weaned pigs fed diets supplemented without/with nucleotides. An in-tissue cytometry method, based on confocal imaging and automated quantitative analysis was implemented. The studies allowed us to understand molecular bases of animal performance which could not be accessed by a routine histometric approach. Namely, the dietary nucleotides provided more uniform small intestine epithelium with considerably less animal-to-animal variation in respect to mitosis (SEM = 1.02 in control vs. 0.62 in supplemented group), autophagy (SEM = 1.22 vs. 0.99) and expression of p53 protein (SEM = 0.72 vs. 0.28). A significant increase in ratio of apoptosis and autophagy, and significantly lower p53 expression was found in the nucleotide-supplemented pigs as compared to control. The mitosis/apoptosis index was lower in the nucleotide-supplemented group suggesting slower rebuilding of gut epithelium in these pigs as compared to the control, respectively 0.454 to 0.191. Finally, in the supplemented group a drop in p53 expression was observed, however, it remains uncertain whether the reduction in DNA damage index is due to the supplementation with nucleotides utilized as a source for repair processes or due to the reduced DNA alterations.     

Soil fertility in indigenous swidden fields and fallows in northern Amazonia,Brazil

In the northern Brazilian Amazon, indigenous peoples who inhabit the savannas of Roraima, plant their crop fields in frequently managed “forest islands” using a rotating “slash-and-burn” system. The system advocates long-term sustainability, but population growth and threats to indigenous lands have led to shorter rotations and greater frequency of use of forest island areas. Our objective was to examine soil texture and fertility (0–20 cm in depth) in indigenous crop fields (roças) and fallow lands (capoeiras, secondary forests), generating recommendations that may help to optimize traditional soil management. Results indicated that roça sites are less acidic than capoeira sites, which was expected as ashes produced by burning are alkalizing, but acidity did not increase again after 8 months of cultivation, and pH was high in all sites (>6). The general increase in nutrients expected in roças compared with capoeiras did not occur. The expected decrease of soil fertility after first months of cultivation did not happen, nor the increase of soil fertility according to fallow length. Overall, soil texture proved to be the main determinant of fertility. The unexpected results suggest that the edaphic processes resulting from the traditional indigenous cultivations, practised for centuries or millennia in this region, likely contributed to the current stabilization of soil acidity and fertility. The stable moderate fertility and stable high pH observed in all sites are advantages for production in slash-and-burn systems in this region, and this is especially important for more pressured areas, where agroecological practices could improve soil use and management. Although not determinant for soil fertility recovery at the studied depth (0–20 cm), the fallow period (growth of capoeiras) is still important for recovery of environmental and social functions of forest islands.     

Impact of Phlorotannin Extracts from Fucus vesiculosus on Human Gut Microbiota

Recent studies indicate that plant polyphenols could be pointed as potential prebiotic candidates since they may interact with the gut microbiota, stimulating its growth and the production of metabolites. However, little is known about the fate of brown seaweeds’ phlorotannins during their passage throughout the gastrointestinal tract. This work aimed to evaluate the stability and bioaccessibility of Fucus vesiculosus phlorotannins after being submitted to a simulated digestive process, as well as their possible modulatory effects on gut microbiota and short-chain fatty acids production following a fermentation procedure using fecal inoculates to mimic the conditions of the large intestine. The stability of phlorotannins throughout the gastrointestinal tract was reduced, with a bioaccessibility index between 2 and 14%. Moreover, slight alterations in the growth of certain commensal bacteria were noticed, with Enterococcus spp. being the most enhanced group. Likewise, F. vesiculosus phlorotannins displayed striking capacity to enhance the levels of propionate and butyrate, which are two important short-chain fatty acids known for their role in intestinal homeostasis. In summary, this work provides valuable information regarding the behavior of F. vesiculosus phlorotannins along the gastrointestinal tract, presenting clear evidence that these compounds can positively contribute to the maintenance of a healthy gastrointestinal condition.     

Npro of classical swine fever virus contributes to pathogenicity in pigs by preventing type I interferon induction at local replication sites

Classical swine fever (CSF) caused by CSF virus (CSFV) is a highly contagious disease of pigs. The viral protein N^pro of CSFV interferes with alpha- and beta-interferon (IFN-α/β) induction by promoting the degradation of interferon regulatory factor 3 (IRF3). During the establishment of the live attenuated CSF vaccine strain GPE^-, N^pro acquired a mutation that abolished its capacity to bind and degrade IRF3, rendering it unable to prevent IFN-α/β induction. In a previous study, we showed that the GPE^- vaccine virus became pathogenic after forced serial passages in pigs, which was attributed to the amino acid substitutions T830A in the viral proteins E2 and V2475A and A2563V in NS4B. Interestingly, during the re-adaptation of the GPE^- vaccine virus in pigs, the IRF3-degrading function of N^pro was not recovered. Therefore, we examined whether restoring the ability of N^pro to block IFN-α/β induction of both the avirulent and moderately virulent GPE^--derived virus would enhance pathogenicity in pigs. Viruses carrying the N136D substitution in N^pro regained the ability to degrade IRF3 and suppress IFN-α/β induction in vitro. In pigs, functional N^pro significantly reduced the local IFN-α mRNA expression in lymphoid organs while it increased quantities of IFN-α/β in the circulation, and enhanced pathogenicity of the moderately virulent virus. In conclusion, the present study demonstrates that functional N^pro influences the innate immune response at local sites of virus replication in pigs and contributes to pathogenicity of CSFV in synergy with viral replication.     

Diversity of Botryosphaeriaceae species associated with conifers in Portugal

Botryosphaeriaceous fungi were isolated from conifers showing disease symptoms such as diebacks, blights, and cankers. The isolates were grouped based on morphology and ERIC-PCR fingerprinting patterns and representatives of each group were identified by sequencing of the internal transcribed spacer (ITS) region. Nine species from four different genera in Botryosphaeriaceae were identified within the isolates. Many new fungus-host associations were established and several species of Botryosphaeriaceae are reported from conifers for the first time. Most of these species also represent new reports from Portugal. The genus Neofusicoccum that was thought to be mainly restricted to angiosperms was the most frequent within the collection of isolates, followed by Diplodia. Dothiorella and Botryosphaeria represented a minor fraction of the isolates. Interestingly, the most common species was N. luteum, which had never been reported from coniferous hosts. Our results indicate that Neofusicoccum species may be more important as pathogens of conifers than it was previously recognised.     

Osmotin and thaumatin from grape: a putative general defense mechanism against pathogenic fungi

ABSTRACT Little information is available concerning the expression of pathogenesis-related (PR) proteins in grapevine (Vitis vinifera) and their effect properties on the major fungal pathogens of grape. A systematic study was performed on the effect of total or individual grape proteins on mycelial growth, spore germination, and germ tube growth of Uncinula necator, Phomopsis viticola, and Botrytis cinerea. Two proteins, identified as PR proteins by immunological methods and by N-terminal sequencing as osmotin and thaumatin-like protein, exhibited strong antifungal activities in vitro, blocking the growth of Phomopsis viticola and Botrytis cinerea mycelia. In addition, they inhibited spore germination and germ tube growth of U. necator, Phomopsis viticola, and Botrytis cinerea. The presence of both proteins displayed a synergistic effect. The expression of osmotin and thaumatin-like protein was induced in grapevine leaves and berries infected with U. necator and Phomopsis viticola. Thaumatin previously was thought to occur exclusively in berries. Immunoblot analyses revealed the accumulation of the two PR proteins in infected leaves and berries, supporting a role in vivo in increasing the resistance of grapevine to fungal attack.     

Effect of synthetic agonists of toll-like receptor 9 on canine lymphocyte proliferation and cytokine production in vitro

Synthetic agonists of TLR9 containing novel DNA structures and R'pG (wherein R=1-(2'-deoxy-beta-d-ribofuranosyl)-2-oxo-7-deaza-8-methyl-purine) motifs, referred to as immune modulatory oligonucleotides (IMOs), have been shown to stimulate T(H)-1-type-immune responses and potently reverse allergen-induced T(H)-2 responses to T(H)-1 responses in vitro and in vivo in mice. In order to investigate the immunomodulatory potential of IMOs in dogs, canine peripheral blood mononuclear cells (PBMC) from healthy dogs were stimulated with three different IMOs and a control IMO, alone or in combination with concanavalin A (ConA). Lipopolysaccharide (LPS) was used as a positive control for B lymphocyte activation. Carboxyfluorescein diacetate succinimidyl ester and phenotype staining was used to tag proliferating T and B lymphocytes (CD5(+) and CD21(+)) by flow cytometry. Real-time PCR and ELISA were processed to assay cytokine production of IFN-gamma, IL-10, TGF-beta, IL-6 and IL-10. Like LPS, IMOs alone induced neither proliferation of CD5(+) T cells nor CD21(+) B cells, but both LPS and IMO had the capacity to co-stimulate ConA and induced proliferation of B cells. In combination with ConA, one of the IMOs (IMO1) also induced proliferation of T cells. IMO1 also significantly enhanced the expression of IFN-gamma on the mRNA and protein level in canine PBMC, whereas expression of IL-10, TGF-beta and IL-4 mRNAs was not induced by any of the IMOs. These results indicate that in canine PBMC from healthy dogs, IMO1 was able to induce a T(H)-1 immune response including T- and B-cell proliferation.