Clinical findings related to intramammary infections in meat-producing ewes

The aim of this study was to investigate the relationship between clinical findings and bacterial isolation in milk samples of meat-producing ewes. The study was conducted in 17 commercial flocks and 550 udder halves from suckling Santa Ines ewes. Initially, the clinical examination of the mammary glands and teats was performed by visual inspection and palpation of the teats and udder halves; then a scoring system was devised for all the findings. After that, the strip cup test and the California mastitis test (CMT) were performed. Then, milk samples for somatic cell counts (SCCs) and bacteriological analyses were collected. Staphylococci bacteria were the main etiological agent isolated in the present study. Upon investigation of the correlations between bacterial isolation and the clinical findings, only the presence of teat injury, pendulous udder, and alterations in the palpation of the teat were associated with bacterial isolation. A significant correlation between bacteriologically positive milk samples and CMT and SCC was also found. Thus, some clinical findings appeared as a risk factor for bacteriologically positive milk samples and can be used as a tool in mastitis control programs. However, a complete and extensive diagnosis, an appropriate therapy, and an efficient mastitis control program will require the combination of clinical examination, microbiological tests, and SCC.     

First report of Porcine teschovirus (PTV), Porcine sapelovirus (PSV) and Enterovirus G (EV-G) in pig herds of Brazil

Porcine teschovirus (PTV), Porcine sapelovirus (PSV) and Enterovirus G (EV-G) have been associated with enteric, respiratory, reproductive and neurological disorders. Although Brazil is the world’s fourth largest producer and exporter of pork, no information on the occurrence of PTV, PSV and EV-G infections is available for Brazilian pig herds. This study aimed to investigate the occurrence of Porcine enteric picornavirus infections in pig farms located in three distinct geographical regions of Brazil. Forty randomly selected diarrhoeic and normal consistency faeces of suckling (n?=?22) and nursery (n?=?18) pigs from farms located in 21 distinct cities of the Southern, Southeast, and Midwest regions of Brazil were evaluated by nested-RT-PCR assays. Suckling piglets presented the expected amplicon size for PTV (158 bp) and EV-G (313 bp) in single and mixed infections in 40.9 % (9/22) of the faecal samples. PSV amplicon (212 bp) was not detected in this age group. For nursery pigs, Porcine enteric picornaviruses amplicons were present in 77.8 % (14/18) of the faecal samples. PTV and EV-G were detected in single and mixed infections, while PSV was detected only in two samples in co-infection with PTV and EV-G in this age group. The Brazilian regions evaluated presented at least two of the tested viruses. Sequencing analysis revealed high similarities to the related viruses (95.3 to 99.2 % for PTV, 94.2 to 98.5 % for PSV and 86 to 100 % for EV-G). For the first time PTV, PSV and EV-G have been molecularly detected and characterised in pig faecal samples in Brazil.     

Spillover effects of a Mediterranean marine protected area on the European spiny lobster Palinurus elephas (Fabricius, 1787) resource

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You cannot conserve a species that has not been found: The case of the marine sponge Axinella polypoides in Liguria,Italy

1. Detailed knowledge about the distribution of species in need of protection is required for the management of Marine Protected Areas, a major tool to reduce marine biodiversity loss. Such knowledge is deficient for most marine invertebrates.
2. Axinella polypoides is a marine sponge included on the list of protected species by the Barcelona Convention (1976) and the Bern Convention (1987). This large and erect species has an important ecological role in habitat forming and benthic–pelagic coupling.
3. Bathymetrical, geographical and ecological data over the last 60 years were collated from publications and reports, together with new surveys to assess the distribution and protection status in Liguria of A. polypoides. It identified a more widespread distribution than previously thought, which points at a general need for dedicated investigations on the occurrence of species that require protection.
4. Bathymetrical distribution was trimodal, with peaks corresponding to different geomorphological settings: coastal cliff bases (around 38 m depth), inner shelf shoals (52 m) and rocks amidst coarse sediment on the outer shelf (79 m). Density was significantly greater at the shallowest depths. The species was mostly found in the coralligenous biocoenosis, in association with other characteristic species or forming a monospecific facies.
5. On (sub)vertical cliffs, A. polypoides often exhibited an unusual cane shape, rather than the typical bushy morphology, thus causing confusion with the congeneric A. cannabina, a more southern species. Records of the latter in the Ligurian Sea therefore need confirmation.
6. Only a minority (22.6%) of A. polypoides records were in Marine Protected Areas, the remainder being located in areas with no current environmental protection plans in place. While the occurrence of this species in MPAs remained stable over the decades, the only quantitative historical data available indicated that populations in non-protected areas were declining owing to anthropogenic impacts (fishing and anchoring).

     

UK deep‐sea conservation: Progress,lessons learned,and actions for the future

1. Despite a relatively long history of scientific interest fuelled by exploratory research cruises, the UK deep sea has only recently emerged as the subject of targeted and proactive conservation. Enabling legislation over the past 10 years has resulted in the designation of marine protected areas and the implementation of fisheries management areas as spatial conservation tools. This paper reflects on progress and lessons learned, recommending actions for the future.
2. Increased investment has been made to improve the evidence base for deep‐sea conservation, including collaborative research surveys and use of emerging technologies. New open data portals and developments in marine habitat classification systems have been two notable steps to furthering understanding of deep‐sea biodiversity and ecosystem functioning in support of conservation action.
3. There are still extensive gaps in fundamental knowledge of deep‐sea ecosystems and of cause and effect. Costs of new technologies and a limited ability to share data in a timely and efficient manner across sectors are barriers to furthering understanding. In addition, whilst the concepts of natural capital and ecosystem services are considered a useful tool to support the achievement of conservation goals, practical application is challenging.
4. Continued collaborative research efforts and engagement with industry to share knowledge and resources could offer cost‐effective solutions to some of these barriers. Further elaboration of the concepts of natural capital and ecosystem services will aid understanding of the costs and benefits associated with human–environment interactions and support informed decision‐making in conserving the deep sea.
5. Whilst multiple challenges arise for deep‐sea conservation, it is critical to continue ongoing conservation efforts, including exploration and collaboration, and to adopt new conservation strategies that are implemented in a systematic and holistic way and to ensure that these are adaptive to growing economic interest in this marine area.

     

Characterisation of agricultural drainage ditch sediments along the phosphorus transfer continuum in two contrasting headwater catchments

Purpose

This study investigated the phosphorus (P) source, mobilisation and transport potential of ditch bed sediments as well as surrounding field and bank soils in two agricultural headwater catchments with contrasting soil drainage capacities. This information is important for discerning the potential for ditches to attenuate or augment transfers of P from upstream sources and thus for developing appropriate management strategies for these features.

Materials and methods

Phosphorus sources were characterised using the Mehlich3-P, water-soluble P and total P tests. Phosphorus mobilisation potential was characterised using the Mehlich3-AL/P, Mehlich3-Ca/P and DESPRAL P tests. Phosphorus transport potential was characterised using data collected on the presence/absence of surface water in ditches during field surveys and downstream turbidity data.

Results and discussion

Ditch sediments had similar P source contents (Mehlich3-P, water-soluble P and total P) to the surrounding field soils and higher P contents than bank soils. However, calcium contents of sediments in the poorly drained catchment reflected the deep sub-soils rather than the surrounding field and bank soils. Mehlich3-Al/P and Mehlich3-Ca/P contents of ditch sediments in the well (non-calcareous) and poorly (calcareous) drained catchments respectively indicated potential for P retention (above thresholds of 11.7 and 74, respectively). However, sediments were less aggregated than field soils and may mobilise more particulate P (PP) during rain events. Nevertheless, the majority of surveyed ditches dried out from March to September 2011; thus, their potential to mobilise PP may be less important than their capacity to attenuate soluble and PP during this time.

Conclusions

In these and similar catchments, soluble P attenuation and particulate P mobilisation should be maximised and minimised, respectively, for example, by cleaning out the sediments before they become saturated with P and encouraging vegetation growth on ditch beds. This study also highlighted the influence of deep sub-soils on soluble P retention in ditches and thus the utility of characterising soils below depths normally included in soil classifications.

     

Inactivation of TNF signaling by rationally designed dominant-negative TNF variants

Tumor necrosis factor (TNF) is a key regulator of inflammatory responses and has been implicated in many pathological conditions. We used structure-based design to engineer variant TNF proteins that rapidly form heterotrimers with native TNF to give complexes that neither bind to nor stimulate signaling through TNF receptors. Thus, TNF is inactivated by sequestration. Dominant-negative TNFs represent a possible approach to anti-inflammatory biotherapeutics, and experiments in animal models show that the strategy can attenuate TNF-mediated pathology. Similar rational design could be used to engineer inhibitors of additional TNF superfamily cytokines as well as other multimeric ligands.     

Serine-7 of the RNA polymerase II CTD is specifically required for snRNA gene expression

RNA polymerase II (Pol II) transcribes genes that encode proteins and noncoding small nuclear RNAs (snRNAs). The carboxyl-terminal repeat domain (CTD) of the largest subunit of mammalian RNA Pol II, comprising tandem repeats of the heptapeptide consensus Tyr1-Ser2-Pro3-Thr4-Ser5-Pro6-Ser7, is required for expression of both gene types. We show that mutation of serine-7 to alanine causes a specific defect in snRNA gene expression. We also present evidence that phosphorylation of serine-7 facilitates interaction with the snRNA gene-specific Integrator complex. These findings assign a biological function to this amino acid and highlight a gene type-specific requirement for a residue within the CTD heptapeptide, supporting the existence of a CTD code.